Miyakogusa Predicted Gene

Lj3g3v0014450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0014450.1 CUFF.40204.1
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g107495.1 | hypothetical protein | HC | chr1:48803181-4880...   103   5e-23

>Medtr1g107495.1 | hypothetical protein | HC |
           chr1:48803181-48800247 | 20130731
          Length = 163

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 76/133 (57%), Gaps = 3/133 (2%)

Query: 1   MGKTSTRL-MXXXXXXXXXXXXXQFYSKVKDTVXXXXXXXXXXXXXXXXXXXXXXXXAYN 59
           MGKT+TR                QFY+KVK  V                        AYN
Sbjct: 1   MGKTNTRSDSTDSKSDRKFDKKLQFYTKVKTAVASLTATKSISKNQRKHQRRQKKLKAYN 60

Query: 60  LSSILESLPELKASQKSDCEDDFKLNCKSRKKLLLNEGQRLSAVLKDDFFQADPLSVIHQ 119
           LSS+L++LPE  A QK   ED+FK+NCK+R+KL+L EGQRL  + K+D FQ +PL+ IHQ
Sbjct: 61  LSSLLDTLPEFNAPQKPCNEDNFKVNCKTRQKLVLKEGQRLCELFKNDSFQVNPLAAIHQ 120

Query: 120 HLQNT--QPIVEK 130
           HL++T  +P++EK
Sbjct: 121 HLRSTHPEPVLEK 133