Miyakogusa Predicted Gene
- Lj3g3v0002100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0002100.1 tr|A9TGW3|A9TGW3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_145447,46.9,4e-19,no description,Heat shock protein
DnaJ, N-terminal; DnaJ,Heat shock protein DnaJ, N-terminal;
DNAJ_2,CUFF.40168.1
(139 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g007300.1 | chaperone DnaJ domain protein | HC | chr4:1081... 164 2e-41
Medtr2g097690.1 | chaperone DnaJ domain protein | HC | chr2:4172... 55 3e-08
Medtr2g097690.2 | chaperone DnaJ domain protein | HC | chr2:4172... 54 4e-08
Medtr7g069480.1 | DnaJ heat shock amine-terminal domain protein ... 54 5e-08
Medtr6g026940.1 | chaperone DnaJ domain protein | HC | chr6:9110... 52 1e-07
Medtr2g014470.1 | DnaJ heat shock family protein | HC | chr2:414... 50 7e-07
Medtr2g104030.1 | molecular chaperone Hsp40/DnaJ family protein ... 49 2e-06
Medtr2g090705.1 | DnaJ heat shock family protein | HC | chr2:388... 49 2e-06
Medtr7g069480.2 | DnaJ heat shock amine-terminal domain protein ... 47 4e-06
Medtr8g022310.6 | chaperone DnaJ domain protein | HC | chr8:7909... 47 4e-06
Medtr8g022310.5 | chaperone DnaJ domain protein | HC | chr8:7909... 47 4e-06
Medtr8g022310.9 | chaperone DnaJ domain protein | HC | chr8:7909... 47 4e-06
Medtr7g109340.1 | DnaJ heat shock family protein | HC | chr7:446... 47 4e-06
Medtr8g022310.4 | chaperone DnaJ domain protein | HC | chr8:7909... 47 5e-06
Medtr8g022310.3 | chaperone DnaJ domain protein | HC | chr8:7909... 47 5e-06
Medtr8g022310.2 | chaperone DnaJ domain protein | HC | chr8:7909... 47 5e-06
Medtr4g078850.1 | DnaJ heat shock family protein | HC | chr4:304... 47 5e-06
Medtr8g022310.1 | chaperone DnaJ domain protein | HC | chr8:7909... 47 7e-06
Medtr4g015840.1 | DnaJ heat shock family protein | HC | chr4:480... 46 9e-06
>Medtr4g007300.1 | chaperone DnaJ domain protein | HC |
chr4:1081590-1079863 | 20130731
Length = 161
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 105/153 (68%), Gaps = 16/153 (10%)
Query: 2 AAAAAGVIGGYSLSWMQFKGRERNHNR---VMICCSSS--------LMDSYKTLRVQPGA 50
A A GVIGG SWMQF +E+ N+ V +CCS S +MD YKTLR+QPGA
Sbjct: 3 ATTAVGVIGGNGSSWMQFGRKEKKQNKMNKVRVCCSKSKSKSKSSSVMDPYKTLRIQPGA 62
Query: 51 SQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMANLR----GESNTSLMYEA 106
S+++V+KAFR LALQYHPDVC+G CGVQFH INEAYD+VM+NLR T+ Y
Sbjct: 63 SESDVRKAFRQLALQYHPDVCKGRDCGVQFHLINEAYDIVMSNLRENVIETYETTTTYNE 122
Query: 107 GIDEAIKGVNDQDLEDLWEEWMGWEGAGIRDYS 139
DE+ +G+ND D WEEWMGWEGAGIRDYS
Sbjct: 123 NNDESFRGMNDPDW-GYWEEWMGWEGAGIRDYS 154
>Medtr2g097690.1 | chaperone DnaJ domain protein | HC |
chr2:41729733-41734327 | 20130731
Length = 272
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 12 YSLSWMQFKGRERNHNRVMICCSSSLMDS-YKTLRVQPGASQTEVKKAFRHLALQYHPDV 70
YS + K R NR+ + + +S Y+ L + P AS E+KKA+R LAL+YHPDV
Sbjct: 47 YSNCYTNKKQHGRGGNRMRVIVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDV 106
Query: 71 CQGSKCGVQFHHINEAYDVVMANLRGESNTSLMYEAGIDEAIKGVNDQDLEDLWEEWMGW 130
+ +F I AY+ ++ S++ Y++G +G N W + +
Sbjct: 107 NKEDNAQEKFLRIKHAYNTLL-----NSSSRRKYDSG----NRGSNSSQRSQSWNQQVEE 157
Query: 131 EGAGIRDY 138
E G+ ++
Sbjct: 158 EFYGLGNF 165
>Medtr2g097690.2 | chaperone DnaJ domain protein | HC |
chr2:41729541-41734543 | 20130731
Length = 203
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 11 GYSLSWMQFKGRERNHNRVMICCSSSLMDS-YKTLRVQPGASQTEVKKAFRHLALQYHPD 69
YS + K R NR+ + + +S Y+ L + P AS E+KKA+R LAL+YHPD
Sbjct: 46 NYSNCYTNKKQHGRGGNRMRVIVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPD 105
Query: 70 VCQGSKCGVQFHHINEAYDVVMANLRGESNTSLMYEAGIDEAIKGVNDQDLEDLWEEWMG 129
V + +F I AY+ ++ S++ Y++G +G N W + +
Sbjct: 106 VNKEDNAQEKFLRIKHAYNTLL-----NSSSRRKYDSG----NRGSNSSQRSQSWNQQVE 156
Query: 130 WEGAGIRDY 138
E G+ ++
Sbjct: 157 EEFYGLGNF 165
>Medtr7g069480.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr7:25594923-25598737 | 20130731
Length = 558
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVV 90
+D YK L V ASQ E++KAF L+LQYHPD + +F IN AY+++
Sbjct: 26 IDPYKVLGVDKSASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEIL 78
>Medtr6g026940.1 | chaperone DnaJ domain protein | HC |
chr6:9110084-9105976 | 20130731
Length = 180
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDV-CQGSK-----CGVQFHHINEAYDVVM 91
MD YK L + AS+ E+K AF+ LA Q+HPD Q SK ++F ++EAY+V+M
Sbjct: 1 MDHYKVLGLNKTASKEEIKIAFKKLAFQFHPDKHSQSSKSVRENATIRFKQVSEAYEVLM 60
>Medtr2g014470.1 | DnaJ heat shock family protein | HC |
chr2:4141807-4143789 | 20130731
Length = 340
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVVM---- 91
+D YK L+V A++ E+KKA+R LA+++HPD +K +F I+EAY+V+
Sbjct: 3 VDYYKILKVDKNATEEELKKAYRKLAMKWHPDKNPSNKKDAEAKFKEISEAYEVLSDPQK 62
Query: 92 ---------ANLRGE---SNTSLMYEAGIDEAIKGVNDQDLEDLWEEWMGW 130
L+G+ + +++G N ++ D++ E+ G+
Sbjct: 63 KAIYDQYGEEGLKGQVPPPQDATFFQSGDGPTTFRFNPRNANDIFAEFFGF 113
>Medtr2g104030.1 | molecular chaperone Hsp40/DnaJ family protein |
HC | chr2:44808854-44818019 | 20130731
Length = 496
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMANLRGES 98
D Y TL V A+ E+K A+R LA QYHPDV + +F I+ AY+ V+++ + +
Sbjct: 70 DYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYE-VLSDDKKRA 128
Query: 99 NTSLMYEAGIDEAIKG 114
EAG+ ++ G
Sbjct: 129 LYDQYGEAGVKSSVGG 144
>Medtr2g090705.1 | DnaJ heat shock family protein | HC |
chr2:38858994-38862715 | 20130731
Length = 336
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVVMANLR 95
+D YK L+V A ++KKA+R LA+++HPD +K +F I+EAYDV+
Sbjct: 3 VDYYKLLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVL----- 57
Query: 96 GESNTSLMYEAGIDEAIKG 114
+SN +Y+ ++ +KG
Sbjct: 58 SDSNKRAVYDQYGEDGLKG 76
>Medtr7g069480.2 | DnaJ heat shock amine-terminal domain protein |
HC | chr7:25594923-25598737 | 20130731
Length = 552
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHIN 84
+D YK L V ASQ E++KAF L+LQYHPD + +F IN
Sbjct: 26 IDPYKVLGVDKSASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQIN 72
>Medtr8g022310.6 | chaperone DnaJ domain protein | HC |
chr8:7909385-7904981 | 20130731
Length = 212
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr8g022310.5 | chaperone DnaJ domain protein | HC |
chr8:7909385-7904882 | 20130731
Length = 212
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr8g022310.9 | chaperone DnaJ domain protein | HC |
chr8:7909385-7904882 | 20130731
Length = 208
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr7g109340.1 | DnaJ heat shock family protein | HC |
chr7:44686128-44692020 | 20130731
Length = 344
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 YKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-KCGVQFHHINEAYDVVMAN 93
Y L+V GAS ++K+A+R LAL+YHPD G+ + +F I+ AY+V+ N
Sbjct: 28 YDILQVSKGASDDQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDN 81
>Medtr8g022310.4 | chaperone DnaJ domain protein | HC |
chr8:7909385-7905037 | 20130731
Length = 196
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr8g022310.3 | chaperone DnaJ domain protein | HC |
chr8:7909385-7904882 | 20130731
Length = 196
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr8g022310.2 | chaperone DnaJ domain protein | HC |
chr8:7909346-7905037 | 20130731
Length = 196
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr4g078850.1 | DnaJ heat shock family protein | HC |
chr4:30479590-30482280 | 20130731
Length = 347
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVVMANLR 95
+D YK L+V A+ E+KKA+R LA+++HPD +K +F I+EAY+V+
Sbjct: 3 VDYYKILQVDKNANDDELKKAYRKLAMKWHPDKNPTNKKDAEAKFKQISEAYEVL----- 57
Query: 96 GESNTSLMYEAGIDEAIKG 114
+ +Y+ +E +KG
Sbjct: 58 ADPEKKAIYDQYGEEGLKG 76
>Medtr8g022310.1 | chaperone DnaJ domain protein | HC |
chr8:7909385-7904882 | 20130731
Length = 235
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGS-------KCGVQFHHINEAYDVVM 91
D Y L + S +E++ A++ LAL++HPD C S + +F I EAY V+
Sbjct: 10 DFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVL- 68
Query: 92 ANLRGESNTSLMYEAGI 108
+SN LMY+ G+
Sbjct: 69 ----SDSNKRLMYDVGV 81
>Medtr4g015840.1 | DnaJ heat shock family protein | HC |
chr4:4800688-4796670 | 20130731
Length = 341
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 29/118 (24%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVVMANLR 95
+D YK L++ A ++KKA+R LA+++HPD +K +F I+EAYDV+
Sbjct: 3 VDYYKVLQIDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKTISEAYDVL----- 57
Query: 96 GESNTSLMYEAGIDEAIKG----------------------VNDQDLEDLWEEWMGWE 131
+ +Y+ +E +KG N + +D++ E+ G++
Sbjct: 58 SDPQKRAVYDQYGEEGLKGQMPPPGAGGFSDGGDGGPTMFRFNPRSADDIFSEFFGFQ 115