Miyakogusa Predicted Gene

Lj2g3v3403230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3403230.1 Non Characterized Hit- tr|Q56WL2|Q56WL2_ARATH
Putative uncharacterized protein At1g20760
OS=Arabidop,68.85,5e-18,seg,NULL; EF-hand,NULL; no
description,EF-hand-like domain; efhand_3,NULL;
INTERSECTIN-RELATED,NULL;,CUFF.40150.1
         (568 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g099170.1 | calcium-binding EF hand-like protein | HC | ch...   552   e-157
Medtr1g018480.1 | calcium-binding EF hand-like protein | HC | ch...   436   e-122
Medtr3g115640.1 | calcium-binding EF hand protein | HC | chr3:54...   283   3e-76

>Medtr5g099170.1 | calcium-binding EF hand-like protein | HC |
           chr5:43470013-43480817 | 20130731
          Length = 1001

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 330/582 (56%), Positives = 373/582 (64%), Gaps = 74/582 (12%)

Query: 1   MVKAALYGPAASKIPEPQINFXXXXXXXXXXXXXXXXXXXXXXXXXXXQSVPVNQNLGLR 60
           MVKAALYGPAASKIP PQINF                            + P   NLG R
Sbjct: 88  MVKAALYGPAASKIPAPQINFAATV------------------------TPPSAPNLGPR 123

Query: 61  GAVPNSSGNQQNIPSQN----LNLPASNLAPRVVTQGLSGAIPVGVVRPVT----PSYGS 112
           G +PN     QN P+ +    L  P  N++    TQGL     V   RP T    P YG+
Sbjct: 124 GPLPN-----QNFPAASQPTPLVRPLQNMS--AGTQGLPA---VSGPRPATSSAFPGYGN 173

Query: 113 TGKTG--GAPDGMPSQIAPRGSSPGSIPEGFGLATSGSNVA-LAPR--QYPASGTKPSDQ 167
            G +G    P    SQ+  RG+SP +I       TS S+VA L P   Q+P S +KPS  
Sbjct: 174 MGSSGPLQQPQVTSSQLPVRGTSPVAI------TTSASSVAPLTPTQPQHPLSASKPS-- 225

Query: 168 GVKDSKLKDTSVNEI-SPDSLFGGDMFSASSFKPKQDXXXXXXXXXXXXXXXAIVPISGG 226
                   DTSVN I + DS FGGD+FS +S                     AIVP+SGG
Sbjct: 226 --------DTSVNGIMASDSFFGGDLFSTTS-------SQPNQNSSSQGFSSAIVPVSGG 270

Query: 227 SQNXXXXXXXXXXXXXLATQPFGAQLHQA-QPLVKQNQHAPVQSPNMLNSSGLPVRLQDS 285
           +Q+             LAT      L Q  QP V QNQHA VQ+PN+  SSGLPVRLQDS
Sbjct: 271 NQSSIRTTTPDSLQTSLATHSVRPHLLQLNQPAVNQNQHASVQAPNIPTSSGLPVRLQDS 330

Query: 286 ASSQPQPPWPRMTQSDIQKYMKVFMEVDTDRDGKITGEQARNLFLSWRLPREVLMKVWDL 345
           AS QPQPPWPRMTQ+D+QKY +VFMEVD DRDGKITGEQARNLFLSW+LPREVLM+VWDL
Sbjct: 331 ASGQPQPPWPRMTQTDVQKYTRVFMEVDRDRDGKITGEQARNLFLSWQLPREVLMQVWDL 390

Query: 346 SDQDNDSMLSLREFCIALYLMERHREGRVLPEVLPSNIVLDLP-TTGQPAPLHSAVTWGN 404
           SDQDNDSMLSLREF IALYLMERHREGR LP VLP+NI+ D+P TTGQPA LH+ VTWGN
Sbjct: 391 SDQDNDSMLSLREFWIALYLMERHREGRALPSVLPNNILPDIPTTTGQPANLHTPVTWGN 450

Query: 405 PSGFQQQQGVTGSGARQVNXXXXXXXXXXXXXXXSDEGPQNKQQKSRVPVLEKNLITQLS 464
            SG QQQQG+TGSGARQ+N               SDEG QNKQQKS++PVLEK+LI QLS
Sbjct: 451 QSGVQQQQGMTGSGARQLN-PTAGRPPRPAAVPPSDEGTQNKQQKSKIPVLEKHLINQLS 509

Query: 465 SDEQNSINSKFQEATEADXXXXXXXXXXXXXXXXIEFCRAKMQELVIYKSRCDNRLNEIV 524
           SDEQNSIN KFQEATEAD                I+F R+KMQELVIYKSRCDNRLNEI+
Sbjct: 510 SDEQNSINLKFQEATEADKKVEELEKEIAESREKIDFFRSKMQELVIYKSRCDNRLNEIM 569

Query: 525 ERISADRREVEILGKKYEDKYKQVGDLSSRLTTEEATFRDIQ 566
           ERISAD+ EV+ L KKYEDKYKQVGD+SS+LTTEEATFRDIQ
Sbjct: 570 ERISADKHEVDNLAKKYEDKYKQVGDVSSKLTTEEATFRDIQ 611


>Medtr1g018480.1 | calcium-binding EF hand-like protein | HC |
           chr1:5334173-5343203 | 20130731
          Length = 763

 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/435 (56%), Positives = 284/435 (65%), Gaps = 61/435 (14%)

Query: 135 GSIPEGFGLATSGSNVALAPRQYPASGTKPSDQGVKDSKLKDTSVNE--ISPDSLF-GGD 191
            S  EGFG A + S   +AP  +P     P            TSVN+  ++ DS F GGD
Sbjct: 19  ASTQEGFGFAITSSASIVAPPTWPTQSKYP------------TSVNDGIVASDSFFRGGD 66

Query: 192 MFSASSFKPKQDXXXXXXXXXXXXXXXAIVPISGGSQNXXXXXXXXXXXXXLATQPFGAQ 251
           +FS +S +P QD               AI+ +S  +               LAT      
Sbjct: 67  LFSTTSSQPNQDSSPHGFSS-------AILHVSCWN------TTSDSLQSSLAT------ 107

Query: 252 LHQAQPLVKQNQHAPVQSPNMLNSSGLPVRLQDSASSQPQPPWPRMTQSDIQKYMKVFME 311
            H  +P ++QNQHA VQ+PNM +S GLPVRLQDSAS QPQPPWPRMTQ+D QKY  +FME
Sbjct: 108 -HSVRPYLQQNQHASVQAPNMHSSPGLPVRLQDSASGQPQPPWPRMTQTDKQKYTNIFME 166

Query: 312 VDTDRDGKITGEQARNLFLSWRLPREVLMKVWDLSDQDNDSMLSLREFCIALYLMERHRE 371
           VD DRDGKITGEQAR+LFLSW LP++VL +V DLSDQDNDSMLSL EFCIAL+LMERHRE
Sbjct: 167 VDKDRDGKITGEQARDLFLSWALPKDVLKQVCDLSDQDNDSMLSLNEFCIALHLMERHRE 226

Query: 372 GRVLPEVLPSNIVLDLPTTGQPAPLHSAVTWGNPSGFQQQQGVTGSGARQVNXXXXXXXX 431
           G  LP VLP+NI+LDLPT+GQPA L S VTWGN SG QQQQ +TGSGA+ +N        
Sbjct: 227 GHALPAVLPNNILLDLPTSGQPANLLSPVTWGNQSGVQQQQMMTGSGAQHLN-PTAGWPP 285

Query: 432 XXXXXXXSDEGPQNKQQKSRVPVLEKNLITQLSSDEQNSINSKFQEATEADXXXXXXXXX 491
                  SDEGPQ+KQQKS++PVLEK+L  QLSSDEQNSIN KFQEATEA+         
Sbjct: 286 RPAAVPPSDEGPQSKQQKSKIPVLEKHLTNQLSSDEQNSINLKFQEATEAN--------- 336

Query: 492 XXXXXXXIEFCRAKMQELVIYKSRCDNRLNEIVERISADRREVEILGKKYEDKYKQVGDL 551
                           ++V Y SRCDNRLNE  ERISAD+ EVEIL KKYEDKYKQVGD+
Sbjct: 337 ----------------KMVKYNSRCDNRLNETTERISADKHEVEILAKKYEDKYKQVGDV 380

Query: 552 SSRLTTEEATFRDIQ 566
           SS+LTTEEATF DIQ
Sbjct: 381 SSKLTTEEATFCDIQ 395


>Medtr3g115640.1 | calcium-binding EF hand protein | HC |
           chr3:54123092-54134514 | 20130731
          Length = 1180

 Score =  283 bits (724), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 159/322 (49%), Positives = 195/322 (60%), Gaps = 17/322 (5%)

Query: 250 AQLHQAQPLVKQNQHA--PVQSPNMLNSSGLPVRLQDSASSQPQPPWPRMTQSDIQKYMK 307
           +Q+ + Q L   NQ    P  SP  L +SG  V L +++S   QPPWP+M   D+QKY K
Sbjct: 439 SQIPRTQSLPNTNQQISPPASSP--LTTSGRSVGLGNTSSDNSQPPWPKMKPFDVQKYRK 496

Query: 308 VFMEVDTDRDGKITGEQARNLFLSWRLPREVLMKVWDLSDQDNDSMLSLREFCIALYLME 367
           VFMEVDTDRDGKITGE+AR LF+SWRLP +VL KVWDLSDQDNDSMLSLREFC A+YLME
Sbjct: 497 VFMEVDTDRDGKITGEEARTLFISWRLPIDVLKKVWDLSDQDNDSMLSLREFCYAVYLME 556

Query: 368 RHREGRVLPEVLPSNIVLD---LPTTGQPAPLHSAVTWGNPSGFQQQQGVTGSGARQVNX 424
           R+REGR  P+ LPS+++ D   +  TG P   +    W    GFQQQ G  G+       
Sbjct: 557 RYREGRPPPQSLPSSVIFDETLMSMTGHPNIAYGNAAWNVGPGFQQQPGRPGAPPVAPAA 616

Query: 425 XXXXXXXXXXXXXXSDEGPQNKQQKSRVPVLEKNLITQLSSDEQNSINSKFQEATEADXX 484
                         S   P   Q+K     L+ + +    + EQN I +  ++A E    
Sbjct: 617 GLRPPVQGTPAQVDSTVPP--DQKKFGTSALDDSFLNDTDNSEQN-IETAGKKAEET--- 670

Query: 485 XXXXXXXXXXXXXXIEFCRAKMQELVIYKSRCDNRLNEIVERISADRREVEILGKKYEDK 544
                         IE  R KMQELV+YKSRCDNRLNEI ER SAD+RE E L KKYE+K
Sbjct: 671 ----QNMILDSKEKIELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLSKKYEEK 726

Query: 545 YKQVGDLSSRLTTEEATFRDIQ 566
           YKQV +++S+LT EEA FRDIQ
Sbjct: 727 YKQVSEIASKLTVEEAKFRDIQ 748