Miyakogusa Predicted Gene

Lj2g3v3393200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3393200.1 Non Characterized Hit- tr|G7J657|G7J657_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,45.26,0.000000003,seg,NULL,CUFF.40135.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g090140.1 | DUF150 family protein | HC | chr3:40965326-409...    60   5e-10

>Medtr3g090140.1 | DUF150 family protein | HC |
          chr3:40965326-40968992 | 20130731
          Length = 321

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 8/86 (9%)

Query: 1  MDLVKASSLKPWRIP-SPPLINITTSTATTFYF--SPRSSKNFSFPFSTFQVQHTQLKPL 57
          MDL+K+S+++P RIP S PL  IT S    FY   + RS+  FS  F T  + HT +KPL
Sbjct: 1  MDLIKSSTVQPRRIPPSSPLPTITRSM-NCFYVPSTSRSTTKFSSQFCT--LPHTPIKPL 57

Query: 58 -ILHGKKRNSSDSEPVLEPTIVQEVS 82
           ILH K +NS D EP LEPTI QE+S
Sbjct: 58 VILHVKNKNS-DFEPFLEPTIAQEIS 82