Miyakogusa Predicted Gene

Lj2g3v3372960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3372960.1 tr|D8TMB2|D8TMB2_VOLCA Phosphoglycerate mutase
OS=Volvox carteri GN=pgm3 PE=4 SV=1,36.18,2e-18,Phosphoglycerate
mutase-like,NULL; His_Phos_1,Histidine phosphatase superfamily,
clade-1; no descrip,NODE_58374_length_816_cov_10.247549.path2.1
         (197 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g099030.1 | phosphoglycerate mutase | HC | chr5:43379852-4...   329   1e-90

>Medtr5g099030.1 | phosphoglycerate mutase | HC |
           chr5:43379852-43381233 | 20130731
          Length = 223

 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 153/197 (77%), Positives = 174/197 (88%)

Query: 1   MENGIRPEFQLATDGVSQAQLAAKLFHKELEANDVPLANVRICYSPFSRTTHTAKIVATV 60
           MENGI PEFQLA +GV+QAQLA   F KELE+N++PLANVRICYSPFSRTTHTA +VAT 
Sbjct: 27  MENGILPEFQLAPEGVNQAQLAGYSFQKELESNNIPLANVRICYSPFSRTTHTANVVATA 86

Query: 61  LNLPFEGPQCKVIEDLRERFFGPSFELLSHDKYEQIWELDEKDPLVGPEGGESVKDVACR 120
           LN+PF    CKVI+DLRER+FGPSFELLSHDKY+ IWE+DEKDPLVGPEGGESVKDVA R
Sbjct: 87  LNIPFHASHCKVIQDLRERYFGPSFELLSHDKYDHIWEIDEKDPLVGPEGGESVKDVASR 146

Query: 121 LARAMAVMESEFEGCAVLVVSHGDTLQILQTILHAANQHKEPAYDDLASILNAVQVAPVL 180
           LA+ MA++E EFEGCA+LVVSHGD LQILQTILHAA +HKEP  +DLASIL AVQVAP+L
Sbjct: 147 LAKTMAIIEQEFEGCAILVVSHGDPLQILQTILHAAKKHKEPTSNDLASILEAVQVAPIL 206

Query: 181 SQHRKYALLTGELRGVL 197
           S+HR+YAL TGELR V+
Sbjct: 207 SKHRQYALNTGELRRVI 223