Miyakogusa Predicted Gene

Lj2g3v3341860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3341860.1 Non Characterized Hit- tr|H3D0I9|H3D0I9_TETNG
Uncharacterized protein (Fragment) OS=Tetraodon
nigrov,44.44,5e-19,CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE,NULL;
CYTIDYLYLTRANSFERASE,NULL; coiled-coil,NULL; seg,NULL,CUFF.40136.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g081530.1 | choline-phosphate cytidylyltransferase | HC | ...   219   2e-57
Medtr2g035810.1 | choline-phosphate cytidylyltransferase | HC | ...   192   3e-49
Medtr4g064813.1 | choline-phosphate cytidylyltransferase | LC | ...   169   2e-42

>Medtr3g081530.1 | choline-phosphate cytidylyltransferase | HC |
           chr3:36916465-36912358 | 20130731
          Length = 308

 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/202 (61%), Positives = 134/202 (66%), Gaps = 24/202 (11%)

Query: 3   VKAVGKFKETQRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNR 62
           VKAVG+FKETQRT+GISTSDIIMRIVKDYNQYVLRNLDRGYSRK+LGVSYVKEKRLRVNR
Sbjct: 128 VKAVGRFKETQRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKDLGVSYVKEKRLRVNR 187

Query: 63  RLKTLXXXXXXXXXXXXXXXXXVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTSI 122
           RLKTL                 VAK AGMHRNEWVENADR VAGFLEMFEEGCHKMGT+I
Sbjct: 188 RLKTL----QEKVREQQEKIQTVAKNAGMHRNEWVENADRMVAGFLEMFEEGCHKMGTAI 243

Query: 123 IDRIQERLRGQQPRDD--FLPGNXXXXXXXXXXXXXXXXXXXXXXXSDEQYFEENXXXXX 180
            DRIQE LRGQQP D+  FL                            E+YF++N     
Sbjct: 244 CDRIQESLRGQQPNDESIFL----QNGKDDEDEEYYDDHEEDSDEEFFEEYFDDN----- 294

Query: 181 XXXXXXXXXELHAQNNGKDDNK 202
                    EL+ QNNGKD NK
Sbjct: 295 ---------ELNPQNNGKDTNK 307


>Medtr2g035810.1 | choline-phosphate cytidylyltransferase | HC |
           chr2:15192725-15187789 | 20130731
          Length = 285

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/132 (71%), Positives = 106/132 (80%)

Query: 3   VKAVGKFKETQRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNR 62
           VKA+GKFKET+RT+GISTSDIIMRI+KDYNQYV+RNLDRGYSRKELGVSYVKEKRLR+N 
Sbjct: 126 VKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNM 185

Query: 63  RLKTLXXXXXXXXXXXXXXXXXVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTSI 122
            LK L                 V + AGM+R EWVENADR VAGFLEMFEEGCHKMGT+I
Sbjct: 186 GLKKLQERVKKQQETVGKKIGTVRRIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAI 245

Query: 123 IDRIQERLRGQQ 134
            DRIQE+L+ QQ
Sbjct: 246 RDRIQEQLKAQQ 257


>Medtr4g064813.1 | choline-phosphate cytidylyltransferase | LC |
           chr4:24188474-24190589 | 20130731
          Length = 471

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 98/127 (77%)

Query: 10  KETQRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNRRLKTLXX 69
           KET+RT+GISTSDIIMRI+KDYNQYV+RNLD GYSRKELGVSYVKEKRLR+N  LK L  
Sbjct: 319 KETKRTEGISTSDIIMRIIKDYNQYVMRNLDCGYSRKELGVSYVKEKRLRMNMGLKKLRE 378

Query: 70  XXXXXXXXXXXXXXXVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTSIIDRIQER 129
                          V + AGM+R EWVENADR VAGFLEMFEEG HKMGT+I DRIQE+
Sbjct: 379 RVKKQQETVGKKIGTVRRIAGMNRTEWVENADRLVAGFLEMFEEGYHKMGTAIRDRIQEQ 438

Query: 130 LRGQQPR 136
           L+ QQ +
Sbjct: 439 LKAQQIK 445