Miyakogusa Predicted Gene
- Lj2g3v3340820.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3340820.2 tr|D7MTV5|D7MTV5_ARALL Zinc finger family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_,40.09,7e-19,ZINC
FINGER (C3HC4-TYPE RING FINGER) PROTEIN-LIKE (OS01G0610700
PROTEIN),NULL; MEMBRANE ASSOCIATED R,CUFF.40132.2
(291 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g081490.1 | zinc finger protein | HC | chr3:36898911-36894... 362 e-100
Medtr3g081490.4 | zinc finger protein | HC | chr3:36898911-36894... 360 e-100
Medtr3g081490.2 | zinc finger protein | HC | chr3:36898911-36894... 360 1e-99
Medtr3g081490.3 | zinc finger protein | HC | chr3:36898911-36894... 360 1e-99
Medtr4g059540.1 | RING/U-box protein | HC | chr4:21933621-219287... 103 2e-22
Medtr4g059540.3 | RING/U-box protein | HC | chr4:21933621-219305... 102 4e-22
Medtr4g059540.2 | RING/U-box protein | HC | chr4:21933621-219287... 102 5e-22
Medtr2g094130.1 | RING/U-box protein | HC | chr2:40144316-401482... 85 8e-17
Medtr2g094130.2 | RING/U-box protein | HC | chr2:40144316-401482... 85 9e-17
Medtr2g094130.4 | RING/U-box protein | HC | chr2:40144316-401482... 85 9e-17
Medtr2g094130.3 | RING/U-box protein | HC | chr2:40144316-401482... 85 1e-16
Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-284866... 79 5e-15
Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-284866... 79 5e-15
Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-284866... 79 6e-15
Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-284866... 79 7e-15
Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-284866... 79 7e-15
Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-284866... 79 7e-15
Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-284866... 79 7e-15
Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-683628... 50 3e-06
Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-683628... 50 3e-06
Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-683628... 49 4e-06
Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-683628... 49 4e-06
>Medtr3g081490.1 | zinc finger protein | HC | chr3:36898911-36894526
| 20130731
Length = 476
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/280 (68%), Positives = 220/280 (78%), Gaps = 19/280 (6%)
Query: 1 MDKAGAEVQNDASSSMVSADLALLHHQTCGGNGEDDQTSLIAQSRKPSLSSLQIPARSIE 60
M+K G E+Q DA S M +D +LLHHQ SR+PSLSSLQIP R++E
Sbjct: 1 MEKEGVELQTDAVSMM--SDSSLLHHQ----------------SRRPSLSSLQIPTRTLE 42
Query: 61 SALSSFTRTDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLI 120
SALSS T+TDGPTLSSPGSTRGLPPRP+S KVKSSM+NLLS RSFR KT S+D E++VLI
Sbjct: 43 SALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLI 102
Query: 121 VPDTLPSDGGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSD 180
V DTL SD G LD+KPSTSRS SLNK++FP+S+KAAHSLPVTP NSG ENV GRH
Sbjct: 103 VSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGG 162
Query: 181 SDFSKMKVNQHMTRSFSVPVNVQTTISKP-TDSRRLIRVISARPNLPTIDDISSHNTSVS 239
SD +K KVN+HMTRSFSVPVNV+ T +P TD+RRL+RVISARP T D IS+ + S+
Sbjct: 163 SDSNKSKVNKHMTRSFSVPVNVKATNLRPATDTRRLVRVISARPQPATTDGISTRSDSMQ 222
Query: 240 DIVIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
+IVIEDASEDIPEEEAVCRIC VEL EGG+TLRMDCSCKG
Sbjct: 223 EIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKG 262
>Medtr3g081490.4 | zinc finger protein | HC | chr3:36898911-36894526
| 20130731
Length = 380
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/280 (68%), Positives = 220/280 (78%), Gaps = 19/280 (6%)
Query: 1 MDKAGAEVQNDASSSMVSADLALLHHQTCGGNGEDDQTSLIAQSRKPSLSSLQIPARSIE 60
M+K G E+Q DA S M +D +LLHHQ SR+PSLSSLQIP R++E
Sbjct: 1 MEKEGVELQTDAVSMM--SDSSLLHHQ----------------SRRPSLSSLQIPTRTLE 42
Query: 61 SALSSFTRTDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLI 120
SALSS T+TDGPTLSSPGSTRGLPPRP+S KVKSSM+NLLS RSFR KT S+D E++VLI
Sbjct: 43 SALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLI 102
Query: 121 VPDTLPSDGGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSD 180
V DTL SD G LD+KPSTSRS SLNK++FP+S+KAAHSLPVTP NSG ENV GRH
Sbjct: 103 VSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGG 162
Query: 181 SDFSKMKVNQHMTRSFSVPVNVQTTISKP-TDSRRLIRVISARPNLPTIDDISSHNTSVS 239
SD +K KVN+HMTRSFSVPVNV+ T +P TD+RRL+RVISARP T D IS+ + S+
Sbjct: 163 SDSNKSKVNKHMTRSFSVPVNVKATNLRPATDTRRLVRVISARPQPATTDGISTRSDSMQ 222
Query: 240 DIVIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
+IVIEDASEDIPEEEAVCRIC VEL EGG+TLRMDCSCKG
Sbjct: 223 EIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKG 262
>Medtr3g081490.2 | zinc finger protein | HC | chr3:36898911-36894532
| 20130731
Length = 387
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/280 (68%), Positives = 220/280 (78%), Gaps = 19/280 (6%)
Query: 1 MDKAGAEVQNDASSSMVSADLALLHHQTCGGNGEDDQTSLIAQSRKPSLSSLQIPARSIE 60
M+K G E+Q DA S M +D +LLHHQ SR+PSLSSLQIP R++E
Sbjct: 1 MEKEGVELQTDAVSMM--SDSSLLHHQ----------------SRRPSLSSLQIPTRTLE 42
Query: 61 SALSSFTRTDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLI 120
SALSS T+TDGPTLSSPGSTRGLPPRP+S KVKSSM+NLLS RSFR KT S+D E++VLI
Sbjct: 43 SALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLI 102
Query: 121 VPDTLPSDGGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSD 180
V DTL SD G LD+KPSTSRS SLNK++FP+S+KAAHSLPVTP NSG ENV GRH
Sbjct: 103 VSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGG 162
Query: 181 SDFSKMKVNQHMTRSFSVPVNVQTTISKP-TDSRRLIRVISARPNLPTIDDISSHNTSVS 239
SD +K KVN+HMTRSFSVPVNV+ T +P TD+RRL+RVISARP T D IS+ + S+
Sbjct: 163 SDSNKSKVNKHMTRSFSVPVNVKATNLRPATDTRRLVRVISARPQPATTDGISTRSDSMQ 222
Query: 240 DIVIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
+IVIEDASEDIPEEEAVCRIC VEL EGG+TLRMDCSCKG
Sbjct: 223 EIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKG 262
>Medtr3g081490.3 | zinc finger protein | HC | chr3:36898911-36894532
| 20130731
Length = 387
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/280 (68%), Positives = 220/280 (78%), Gaps = 19/280 (6%)
Query: 1 MDKAGAEVQNDASSSMVSADLALLHHQTCGGNGEDDQTSLIAQSRKPSLSSLQIPARSIE 60
M+K G E+Q DA S M +D +LLHHQ SR+PSLSSLQIP R++E
Sbjct: 1 MEKEGVELQTDAVSMM--SDSSLLHHQ----------------SRRPSLSSLQIPTRTLE 42
Query: 61 SALSSFTRTDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLI 120
SALSS T+TDGPTLSSPGSTRGLPPRP+S KVKSSM+NLLS RSFR KT S+D E++VLI
Sbjct: 43 SALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLI 102
Query: 121 VPDTLPSDGGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSD 180
V DTL SD G LD+KPSTSRS SLNK++FP+S+KAAHSLPVTP NSG ENV GRH
Sbjct: 103 VSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGG 162
Query: 181 SDFSKMKVNQHMTRSFSVPVNVQTTISKP-TDSRRLIRVISARPNLPTIDDISSHNTSVS 239
SD +K KVN+HMTRSFSVPVNV+ T +P TD+RRL+RVISARP T D IS+ + S+
Sbjct: 163 SDSNKSKVNKHMTRSFSVPVNVKATNLRPATDTRRLVRVISARPQPATTDGISTRSDSMQ 222
Query: 240 DIVIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
+IVIEDASEDIPEEEAVCRIC VEL EGG+TLRMDCSCKG
Sbjct: 223 EIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKG 262
>Medtr4g059540.1 | RING/U-box protein | HC | chr4:21933621-21928732
| 20130731
Length = 521
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 20/214 (9%)
Query: 69 TDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLIVPDTLPSD 128
D PT SSPGS ++K KSS+R +L SFR +T + D E+ P S
Sbjct: 101 VDAPTNSSPGSA--------TSKGKSSIRKMLPKLSFRYRTPA-DIEKTN--TPTREVSS 149
Query: 129 GGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSDSDFSKMKV 188
G + KP SRSLSL K+ F K SLP+ +S E+ G + SK +
Sbjct: 150 SGTRE-KPLISRSLSLGKI-FTPRMKRTSSLPLGEIGHSNPESTHGGNGSVGGPLSKKET 207
Query: 189 NQHMTRSFSVPVNVQTTISKPTDSRRL---IRVISARPNLPTIDDISSHNTSVSDIVIED 245
+ RS S+P N +K RR+ RV+ + P + +++ S + + V +D
Sbjct: 208 RLKIARSLSMPANN----NKDKSIRRMDSFFRVVPSTPRVKEANELLSSSPTKDTEVKDD 263
Query: 246 ASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
EDIPEEEAVCRIC VEL EGG T +++CSCKG
Sbjct: 264 DGEDIPEEEAVCRICLVELCEGGETFKLECSCKG 297
>Medtr4g059540.3 | RING/U-box protein | HC | chr4:21933621-21930587
| 20130731
Length = 372
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 70 DGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLIVPDTLPSDG 129
D PT SSPGS ++K KSS+R +L SFR +T + D E+ P S
Sbjct: 102 DAPTNSSPGSA--------TSKGKSSIRKMLPKLSFRYRTPA-DIEKTN--TPTREVSSS 150
Query: 130 GALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSDSDFSKMKVN 189
G + KP SRSLSL K+ P K SLP+ +S E+ G + SK +
Sbjct: 151 GTRE-KPLISRSLSLGKIFTP-RMKRTSSLPLGEIGHSNPESTHGGNGSVGGPLSKKETR 208
Query: 190 QHMTRSFSVPVNVQTTISKPTDSRRL---IRVISARPNLPTIDDISSHNTSVSDIVIEDA 246
+ RS S+P N +K RR+ RV+ + P + +++ S + + V +D
Sbjct: 209 LKIARSLSMPANN----NKDKSIRRMDSFFRVVPSTPRVKEANELLSSSPTKDTEVKDDD 264
Query: 247 SEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
EDIPEEEAVCRIC VEL EGG T +++CSCKG
Sbjct: 265 GEDIPEEEAVCRICLVELCEGGETFKLECSCKG 297
>Medtr4g059540.2 | RING/U-box protein | HC | chr4:21933621-21928750
| 20130731
Length = 468
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 20/214 (9%)
Query: 69 TDGPTLSSPGSTRGLPPRPNSAKVKSSMRNLLSARSFRAKTSSQDCERKVLIVPDTLPSD 128
D PT SSPGS ++K KSS+R +L SFR +T + D E+ P S
Sbjct: 101 VDAPTNSSPGSA--------TSKGKSSIRKMLPKLSFRYRTPA-DIEKTN--TPTREVSS 149
Query: 129 GGALDHKPSTSRSLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGRHPRSDSDFSKMKV 188
G + KP SRSLSL K+ F K SLP+ +S E+ G + SK +
Sbjct: 150 SGTRE-KPLISRSLSLGKI-FTPRMKRTSSLPLGEIGHSNPESTHGGNGSVGGPLSKKET 207
Query: 189 NQHMTRSFSVPVNVQTTISKPTDSRRL---IRVISARPNLPTIDDISSHNTSVSDIVIED 245
+ RS S+P N +K RR+ RV+ + P + +++ S + + V +D
Sbjct: 208 RLKIARSLSMPANN----NKDKSIRRMDSFFRVVPSTPRVKEANELLSSSPTKDTEVKDD 263
Query: 246 ASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
EDIPEEEAVCRIC VEL EGG T +++CSCKG
Sbjct: 264 DGEDIPEEEAVCRICLVELCEGGETFKLECSCKG 297
>Medtr2g094130.1 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 498
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 94 SSMRNLLSARSFRA-KTSSQDCERKVLIVPDTLPSDGGALDHKPSTSRSLSLNKVVFPAS 152
SS R++L +FR +TSS D E+ V+ P S G KPS S S+SL+K+ P
Sbjct: 95 SSNRSILPKLNFRYNRTSSSDIEKAVIGAPAPESSFVGP-HEKPSISGSVSLSKIFNPKI 153
Query: 153 TKAAHSLPVTPSENSGGENVDGRHPRSDSDF--------SKMKVNQHMTRSFSVPVNVQT 204
+ + SLPV E G R +++F S + + R+ S PV+ Q
Sbjct: 154 NRTS-SLPV---EEIG---------RVNTEFAFGGCLGASPYRSQGTIARTRSEPVDSQE 200
Query: 205 TISKPTDSRRLIRVISARPNLPTIDDISSHNTSVSDIVIEDASEDIPEEEAVCRICFVEL 264
I++ D + RV+ + P + + + +T+ D EDI EEEAVCRIC +EL
Sbjct: 201 KITRKMD--KFFRVVPSTPGVKEVKEWLKTSTAKDTENDGDDGEDIAEEEAVCRICLIEL 258
Query: 265 GEGGNTLRMDCSCKG 279
EGG TL+M+C CKG
Sbjct: 259 CEGGETLKMECCCKG 273
>Medtr2g094130.2 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 503
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 94 SSMRNLLSARSFRA-KTSSQDCERKVLIVPDTLPSDGGALDHKPSTSRSLSLNKVVFPAS 152
SS R++L +FR +TSS D E+ V+ P S G KPS S S+SL+K+ P
Sbjct: 95 SSNRSILPKLNFRYNRTSSSDIEKAVIGAPAPESSFVGP-HEKPSISGSVSLSKIFNPKI 153
Query: 153 TKAAHSLPVTPSENSGGENVDGRHPRSDSDF--------SKMKVNQHMTRSFSVPVNVQT 204
+ + SLPV E G R +++F S + + R+ S PV+ Q
Sbjct: 154 NRTS-SLPV---EEIG---------RVNTEFAFGGCLGASPYRSQGTIARTRSEPVDSQE 200
Query: 205 TISKPTDSRRLIRVISARPNLPTIDDISSHNTSVSDIVIEDASEDIPEEEAVCRICFVEL 264
I++ D + RV+ + P + + + +T+ D EDI EEEAVCRIC +EL
Sbjct: 201 KITRKMD--KFFRVVPSTPGVKEVKEWLKTSTAKDTENDGDDGEDIAEEEAVCRICLIEL 258
Query: 265 GEGGNTLRMDCSCKG 279
EGG TL+M+C CKG
Sbjct: 259 CEGGETLKMECCCKG 273
>Medtr2g094130.4 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 443
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 94 SSMRNLLSARSFRA-KTSSQDCERKVLIVPDTLPSDGGALDHKPSTSRSLSLNKVVFPAS 152
SS R++L +FR +TSS D E+ V+ P S G KPS S S+SL+K+ P
Sbjct: 95 SSNRSILPKLNFRYNRTSSSDIEKAVIGAPAPESSFVGP-HEKPSISGSVSLSKIFNPKI 153
Query: 153 TKAAHSLPVTPSENSGGENVDGRHPRSDSDF--------SKMKVNQHMTRSFSVPVNVQT 204
+ + SLPV E G R +++F S + + R+ S PV+ Q
Sbjct: 154 NRTS-SLPV---EEIG---------RVNTEFAFGGCLGASPYRSQGTIARTRSEPVDSQE 200
Query: 205 TISKPTDSRRLIRVISARPNLPTIDDISSHNTSVSDIVIEDASEDIPEEEAVCRICFVEL 264
I++ D + RV+ + P + + + +T+ D EDI EEEAVCRIC +EL
Sbjct: 201 KITRKMD--KFFRVVPSTPGVKEVKEWLKTSTAKDTENDGDDGEDIAEEEAVCRICLIEL 258
Query: 265 GEGGNTLRMDCSCKG 279
EGG TL+M+C CKG
Sbjct: 259 CEGGETLKMECCCKG 273
>Medtr2g094130.3 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 438
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 94 SSMRNLLSARSFRA-KTSSQDCERKVLIVPDTLPSDGGALDHKPSTSRSLSLNKVVFPAS 152
SS R++L +FR +TSS D E+ V+ P S G KPS S S+SL+K+ P
Sbjct: 95 SSNRSILPKLNFRYNRTSSSDIEKAVIGAPAPESSFVGP-HEKPSISGSVSLSKIFNPKI 153
Query: 153 TKAAHSLPVTPSENSGGENVDGRHPRSDSDF--------SKMKVNQHMTRSFSVPVNVQT 204
+ + SLPV E G R +++F S + + R+ S PV+ Q
Sbjct: 154 NRTS-SLPV---EEIG---------RVNTEFAFGGCLGASPYRSQGTIARTRSEPVDSQE 200
Query: 205 TISKPTDSRRLIRVISARPNLPTIDDISSHNTSVSDIVIEDASEDIPEEEAVCRICFVEL 264
I++ D + RV+ + P + + + +T+ D EDI EEEAVCRIC +EL
Sbjct: 201 KITRKMD--KFFRVVPSTPGVKEVKEWLKTSTAKDTENDGDDGEDIAEEEAVCRICLIEL 258
Query: 265 GEGGNTLRMDCSCKG 279
EGG TL+M+C CKG
Sbjct: 259 CEGGETLKMECCCKG 273
>Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 396
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARP--NLPTIDDISSHNTSVSDIVIEDASEDIPEEEAV 256
V + T + R+ P N +S + ++ ED EDIPEEEAV
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRTIPQFNEKITTTVSVASPKGENVETEDGGEDIPEEEAV 259
Query: 257 CRICFVELGEGGNTLRMDCSCKG 279
CRIC ELGEG + +++CSCKG
Sbjct: 260 CRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 432
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARPNLPTIDDISSHNTSVS-----DIVIEDASEDIPEE 253
V + T + R+ +P ++ + SV+ ++ ED EDIPEE
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRT---IPQFNEKITTTVSVASPKGENVETEDGGEDIPEE 256
Query: 254 EAVCRICFVELGEGGNTLRMDCSCKG 279
EAVCRIC ELGEG + +++CSCKG
Sbjct: 257 EAVCRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 504
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 25/203 (12%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H RS SV
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIH--RSRSV 203
Query: 199 PVNVQTTISKPTDSRRLIRVISARP--NLPTIDDISSHNTSVSDIVIEDASEDIPEEEAV 256
P + T + R+ P N +S + ++ ED EDIPEEEAV
Sbjct: 204 P----SFTEDDTHVGGMFRIFRTIPQFNEKITTTVSVASPKGENVETEDGGEDIPEEEAV 259
Query: 257 CRICFVELGEGGNTLRMDCSCKG 279
CRIC ELGEG + +++CSCKG
Sbjct: 260 CRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARPNLPTIDDISSHNTSVS-----DIVIEDASEDIPEE 253
V + T + R+ +P ++ + SV+ ++ ED EDIPEE
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRT---IPQFNEKITTTVSVASPKGENVETEDGGEDIPEE 256
Query: 254 EAVCRICFVELGEGGNTLRMDCSCKG 279
EAVCRIC ELGEG + +++CSCKG
Sbjct: 257 EAVCRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARPNLPTIDDISSHNTSVS-----DIVIEDASEDIPEE 253
V + T + R+ +P ++ + SV+ ++ ED EDIPEE
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRT---IPQFNEKITTTVSVASPKGENVETEDGGEDIPEE 256
Query: 254 EAVCRICFVELGEGGNTLRMDCSCKG 279
EAVCRIC ELGEG + +++CSCKG
Sbjct: 257 EAVCRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARPNLPTIDDISSHNTSVS-----DIVIEDASEDIPEE 253
V + T + R+ +P ++ + SV+ ++ ED EDIPEE
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRT---IPQFNEKITTTVSVASPKGENVETEDGGEDIPEE 256
Query: 254 EAVCRICFVELGEGGNTLRMDCSCKG 279
EAVCRIC ELGEG + +++CSCKG
Sbjct: 257 EAVCRICMAELGEGADNFKLECSCKG 282
>Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 85 PRPNSAKVKSSMRN-LLSARSFRAKTSSQDCERKVLIVPD---TLPSDGGALDHKPSTSR 140
P P+S+K +S+++ + SF+ K ++ + E+ + + TLPS KP SR
Sbjct: 97 PSPSSSKNRSTLKKTFIPKLSFKFKNTTSEIEKAAFLALEGSSTLPSK------KPFLSR 150
Query: 141 SLSLNKVVFPASTKAAHSLPVTPSENSGGENVDGR--HPRSDSDFSKMKVNQHMTRSFSV 198
+LS K + + SLPV+P S V G P S+ ++++ H +RS
Sbjct: 151 TLSRMK----SRGRKTSSLPVSPVPRSNPVYVHGGKGFPAMGSE-KELQLPIHRSRS--- 202
Query: 199 PVNVQTTISKPTDSRRLIRVISARPNLPTIDDISSHNTSVS-----DIVIEDASEDIPEE 253
V + T + R+ +P ++ + SV+ ++ ED EDIPEE
Sbjct: 203 ---VPSFTEDDTHVGGMFRIFRT---IPQFNEKITTTVSVASPKGENVETEDGGEDIPEE 256
Query: 254 EAVCRICFVELGEGGNTLRMDCSCKG 279
EAVCRIC ELGEG + +++CSCKG
Sbjct: 257 EAVCRICMAELGEGADNFKLECSCKG 282
>Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-6836281 |
20130731
Length = 424
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 242 VIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
V ED E+IPEE AVCRIC E E GNT +M+C CKG
Sbjct: 203 VTED--EEIPEEAAVCRICLDECDE-GNTFKMECYCKG 237
>Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-6836281 |
20130731
Length = 423
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 242 VIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
V ED E+IPEE AVCRIC E E GNT +M+C CKG
Sbjct: 202 VTED--EEIPEEAAVCRICLDECDE-GNTFKMECYCKG 236
>Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-6836281 |
20130731
Length = 315
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 242 VIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
V ED E+IPEE AVCRIC E E GNT +M+C CKG
Sbjct: 94 VTED--EEIPEEAAVCRICLDECDE-GNTFKMECYCKG 128
>Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-6836281 |
20130731
Length = 315
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 242 VIEDASEDIPEEEAVCRICFVELGEGGNTLRMDCSCKG 279
V ED E+IPEE AVCRIC E E GNT +M+C CKG
Sbjct: 94 VTED--EEIPEEAAVCRICLDECDE-GNTFKMECYCKG 128