Miyakogusa Predicted Gene

Lj2g3v3339660.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339660.1 Non Characterized Hit- tr|C6TLX6|C6TLX6_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,46,2e-18,
,CUFF.40110.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g098630.1 | transmembrane protein, putative | LC | chr5:43...    70   1e-12
Medtr5g098580.1 | transmembrane protein, putative | LC | chr5:43...    69   2e-12
Medtr5g098610.1 | transmembrane protein, putative | LC | chr5:43...    50   2e-06

>Medtr5g098630.1 | transmembrane protein, putative | LC |
           chr5:43175649-43175074 | 20130731
          Length = 191

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 29/168 (17%)

Query: 41  VDKSYIFLLCNSLLVFIAINSAPINQSDQNSNENISHSEFN------VSYTAAPIADEHX 94
           ++KSY+F+L N L+ FI + S   N S   ++++I H   N      + Y A+  A++  
Sbjct: 46  IEKSYMFILVNVLVAFIILYSTLFNASSTTTHDSIEHVVNNDGGGQWLEYIASESAND-- 103

Query: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVLPDTNEDDEEENALMFIVXXXXXX 154
                                              ++ D  ED EEEN+LM I       
Sbjct: 104 ---------AENVTESESTKEEEKTLMISYEPDKMMISDAKEDKEEENSLMII------D 148

Query: 155 XXXXXXXLNKKCEDFIKKMKAAFCSESEPIADGSFYFGY-QKSLVVVN 201
                  LNKKCEDFIKKMKA FCSE+      ++Y+GY  KSLV+VN
Sbjct: 149 EDHETQELNKKCEDFIKKMKAKFCSEAR-----AYYYGYHHKSLVLVN 191


>Medtr5g098580.1 | transmembrane protein, putative | LC |
           chr5:43155450-43154614 | 20130731
          Length = 212

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 83/191 (43%), Gaps = 43/191 (22%)

Query: 34  MQFFGYTVDKSYIFLLCNSLLVFIAINSAPINQSDQNSN---------ENISHSEFNVSY 84
           MQFF Y ++K+Y+FLLCN+LL FIA+ S  IN S   ++         E  +  EF +S 
Sbjct: 40  MQFFSYIIEKTYMFLLCNTLLAFIALYSNLINPSSSTTHQNIQHVLDSEKSNRFEFYISE 99

Query: 85  T--AAPIADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVLPDTNEDDEEEN 142
           +    PI  ++                                   NV+ +  E+DEE  
Sbjct: 100 SEITEPIGGDNVTESESQQEEKSLIMVEPE----------------NVVIEA-EEDEEVK 142

Query: 143 ALMFIVXXXXXXXXX----------XXXXLNKKCEDFIKKMKAAFCSESEPIADGSFYFG 192
           +L+ +                        LNKKCEDFIKKMKA FC +S   A+  FYF 
Sbjct: 143 SLVIVEQENMNIEEEENDPMIIDKDETEKLNKKCEDFIKKMKATFCYDSR--AENKFYFD 200

Query: 193 Y---QKSLVVV 200
           Y    KSLV+V
Sbjct: 201 YDQNHKSLVLV 211


>Medtr5g098610.1 | transmembrane protein, putative | LC |
          chr5:43167425-43168282 | 20130731
          Length = 213

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 30/39 (76%)

Query: 39 YTVDKSYIFLLCNSLLVFIAINSAPINQSDQNSNENISH 77
          YT+DKSY+FLLCN +L FIA+ S+ IN S   +++NI H
Sbjct: 38 YTIDKSYMFLLCNIILAFIALYSSLINPSSSTTHQNIEH 76