Miyakogusa Predicted Gene

Lj2g3v3339620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339620.1 tr|G7ZWY6|G7ZWY6_MEDTR 60 kDa chaperonin
OS=Medicago truncatula GN=MTR_046s0025 PE=4 SV=1,52,0.0006,
,gene.g44698.t1.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g037030.1 | hypothetical protein | LC | chr1:13620540-1362...    49   7e-07
Medtr5g008160.1 | hypothetical protein | LC | chr5:1689682-16852...    47   4e-06
Medtr5g008160.2 | hypothetical protein | LC | chr5:1689672-16852...    47   4e-06
Medtr5g008160.3 | hypothetical protein | LC | chr5:1689672-16852...    47   4e-06

>Medtr1g037030.1 | hypothetical protein | LC |
          chr1:13620540-13623254 | 20130731
          Length = 218

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 25/89 (28%)

Query: 1  MGSNSRGKDLEGTSGDNMIVDN--YEYEQEMRFLP------ANLNPDGLLDQWAQFPPYG 52
          MG NSRGKD EGTSG N + D+  YEY QEM F+P       N+N +G +          
Sbjct: 1  MGGNSRGKDGEGTSGINRVDDDDSYEYLQEMNFVPYETLLHNNMNTNGFV---------- 50

Query: 53 PRAYEPPSPFLIQQVRVSWLSMFESAYFV 81
                  PFL+QQ   +  ++   A F 
Sbjct: 51 -------VPFLMQQAGTTCATVLIRAIFT 72


>Medtr5g008160.1 | hypothetical protein | LC |
          chr5:1689682-1685254 | 20130731
          Length = 87

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 30/94 (31%)

Query: 1  MGSNSRGKDLEGTSGDNMI-------VDNYEYEQEMRFLP------ANLNPDGLLDQWAQ 47
          MGSNSRGKD EGTSG N +        D+YEY QEM F+P       N+N +G +     
Sbjct: 2  MGSNSRGKDGEGTSGINRVDDDDDDDDDSYEYLQEMNFVPYETLLHNNMNTNGFV----- 56

Query: 48 FPPYGPRAYEPPSPFLIQQVRVSWLSMFESAYFV 81
                       PF++QQ   +  ++   A F 
Sbjct: 57 ------------VPFVMQQAGTTCATVLIRAIFT 78


>Medtr5g008160.2 | hypothetical protein | LC |
          chr5:1689672-1685245 | 20130731
          Length = 87

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 30/94 (31%)

Query: 1  MGSNSRGKDLEGTSGDNMI-------VDNYEYEQEMRFLP------ANLNPDGLLDQWAQ 47
          MGSNSRGKD EGTSG N +        D+YEY QEM F+P       N+N +G +     
Sbjct: 2  MGSNSRGKDGEGTSGINRVDDDDDDDDDSYEYLQEMNFVPYETLLHNNMNTNGFV----- 56

Query: 48 FPPYGPRAYEPPSPFLIQQVRVSWLSMFESAYFV 81
                       PF++QQ   +  ++   A F 
Sbjct: 57 ------------VPFVMQQAGTTCATVLIRAIFT 78


>Medtr5g008160.3 | hypothetical protein | LC |
          chr5:1689672-1685281 | 20130731
          Length = 87

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 30/94 (31%)

Query: 1  MGSNSRGKDLEGTSGDNMI-------VDNYEYEQEMRFLP------ANLNPDGLLDQWAQ 47
          MGSNSRGKD EGTSG N +        D+YEY QEM F+P       N+N +G +     
Sbjct: 2  MGSNSRGKDGEGTSGINRVDDDDDDDDDSYEYLQEMNFVPYETLLHNNMNTNGFV----- 56

Query: 48 FPPYGPRAYEPPSPFLIQQVRVSWLSMFESAYFV 81
                       PF++QQ   +  ++   A F 
Sbjct: 57 ------------VPFVMQQAGTTCATVLIRAIFT 78