Miyakogusa Predicted Gene

Lj2g3v3339500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339500.1 Non Characterized Hit- tr|J3LSR2|J3LSR2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,40.35,0.000000000000001,GOLD,GOLD; EMP24_GP25L,GOLD;
EMP24/GP25L/P24 FAMILY PROTEIN,NULL; TRANSMEMBRANE EMP24
DOMAIN-CONTAIN,CUFF.40095.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g098250.1 | emp24/gp25L/p24 family protein | HC | chr5:430...   390   e-109
Medtr5g098250.3 | emp24/gp25L/p24 family protein | HC | chr5:430...   390   e-109
Medtr5g098250.2 | emp24/gp25L/p24 family protein | HC | chr5:430...   390   e-109
Medtr3g060210.1 | emp24/gp25L/p24 family/GOLD protein | HC | chr...   303   1e-82
Medtr7g095690.1 | emp24/gp25L/p24 family/GOLD protein | HC | chr...   134   5e-32
Medtr1g102720.1 | emp24/gp25L/p24 family protein | HC | chr1:464...   130   1e-30
Medtr8g088940.1 | emp24/gp25L/p24 family protein | HC | chr8:369...    50   1e-06
Medtr8g088980.1 | emp24/gp25L/p24 family protein | HC | chr8:369...    50   1e-06

>Medtr5g098250.1 | emp24/gp25L/p24 family protein | HC |
           chr5:43032151-43036133 | 20130731
          Length = 214

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/205 (90%), Positives = 195/205 (95%)

Query: 8   VLLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGV 67
           V++  LIG+  N K +EGIRFVIDRDECFSHDVKYEGDTVH+SFVVIKADSPWHYGDEGV
Sbjct: 10  VMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGV 69

Query: 68  DLVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYE 127
           DLVVKGPAGEQI DFRDKTS+KFEFVAHK GVHKFCFTNKSPYHETIDFDVHVGHFSY+E
Sbjct: 70  DLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFE 129

Query: 128 QHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAA 187
           QHAKDEHF PLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVND MSRRA+HKA+FESAA
Sbjct: 130 QHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAA 189

Query: 188 LIGASALQVYLLQRLFERKLGTSRV 212
           LIGASALQVYLL+RLFERKLGTSRV
Sbjct: 190 LIGASALQVYLLRRLFERKLGTSRV 214


>Medtr5g098250.3 | emp24/gp25L/p24 family protein | HC |
           chr5:43032250-43035860 | 20130731
          Length = 213

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/205 (90%), Positives = 195/205 (95%)

Query: 8   VLLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGV 67
           V++  LIG+  N K +EGIRFVIDRDECFSHDVKYEGDTVH+SFVVIKADSPWHYGDEGV
Sbjct: 9   VMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGV 68

Query: 68  DLVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYE 127
           DLVVKGPAGEQI DFRDKTS+KFEFVAHK GVHKFCFTNKSPYHETIDFDVHVGHFSY+E
Sbjct: 69  DLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFE 128

Query: 128 QHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAA 187
           QHAKDEHF PLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVND MSRRA+HKA+FESAA
Sbjct: 129 QHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAA 188

Query: 188 LIGASALQVYLLQRLFERKLGTSRV 212
           LIGASALQVYLL+RLFERKLGTSRV
Sbjct: 189 LIGASALQVYLLRRLFERKLGTSRV 213


>Medtr5g098250.2 | emp24/gp25L/p24 family protein | HC |
           chr5:43032151-43036133 | 20130731
          Length = 213

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/205 (90%), Positives = 195/205 (95%)

Query: 8   VLLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGV 67
           V++  LIG+  N K +EGIRFVIDRDECFSHDVKYEGDTVH+SFVVIKADSPWHYGDEGV
Sbjct: 9   VMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGV 68

Query: 68  DLVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYE 127
           DLVVKGPAGEQI DFRDKTS+KFEFVAHK GVHKFCFTNKSPYHETIDFDVHVGHFSY+E
Sbjct: 69  DLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFE 128

Query: 128 QHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAA 187
           QHAKDEHF PLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVND MSRRA+HKA+FESAA
Sbjct: 129 QHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAA 188

Query: 188 LIGASALQVYLLQRLFERKLGTSRV 212
           LIGASALQVYLL+RLFERKLGTSRV
Sbjct: 189 LIGASALQVYLLRRLFERKLGTSRV 213


>Medtr3g060210.1 | emp24/gp25L/p24 family/GOLD protein | HC |
           chr3:23624060-23622844 | 20130731
          Length = 210

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/209 (69%), Positives = 169/209 (80%), Gaps = 1/209 (0%)

Query: 1   MGLSLIHVLLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIK-ADSP 59
           M +   +V +   I +  N+    GIRFVIDR+ECFSH V+YEGD VH SFVVI   DS 
Sbjct: 1   MKVGPPNVAIAMAILLLCNMNGVLGIRFVIDREECFSHYVQYEGDAVHASFVVISVTDST 60

Query: 60  WHYGDEGVDLVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVH 119
           WH   EG+DL V+GP G+QI +FRDKTSEKF+FVAH  G ++FCFTNKSPY E IDFDVH
Sbjct: 61  WHLTQEGLDLTVRGPNGDQIREFRDKTSEKFDFVAHTKGPYRFCFTNKSPYREKIDFDVH 120

Query: 120 VGHFSYYEQHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIH 179
             HFS +EQHA+DEHFTP+L+QI KLEEAL+NIQ+EQHWLEAQT+RQ+IVN+AMS RAIH
Sbjct: 121 SNHFSTFEQHAQDEHFTPMLDQIIKLEEALFNIQYEQHWLEAQTERQSIVNNAMSSRAIH 180

Query: 180 KALFESAALIGASALQVYLLQRLFERKLG 208
           KAL ESAALIGAS LQVYLL+RLFERKLG
Sbjct: 181 KALLESAALIGASTLQVYLLRRLFERKLG 209


>Medtr7g095690.1 | emp24/gp25L/p24 family/GOLD protein | HC |
           chr7:38339432-38341695 | 20130731
          Length = 211

 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 98/179 (54%)

Query: 34  ECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGVDLVVKGPAGEQIHDFRDKTSEKFEFV 93
           EC S  V++ GDT+  +FVV+  D  W     G+D  V  P G  +H  +  + +KFE  
Sbjct: 33  ECVSEYVEHGGDTISGNFVVMDHDIFWSSDHPGIDFTVTSPGGNVVHSLKGTSGDKFELK 92

Query: 94  AHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYEQHAKDEHFTPLLEQIAKLEEALYNIQ 153
           A   G++KFCF N     ET+ F VHVGH       AKDEHF P+  +IA+L EAL +I 
Sbjct: 93  AIHGGIYKFCFHNPISTPETVSFYVHVGHIPNVHNLAKDEHFDPINVKIAELREALESII 152

Query: 154 FEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAALIGASALQVYLLQRLFERKLGTSRV 212
            EQ +L+A+  R    N++  +R I   L E    +G S LQV  ++RLF +    +RV
Sbjct: 153 TEQKYLKARDTRHRNTNESTRKRVIFYTLLEYILFVGTSLLQVVYIRRLFSKSFAYNRV 211


>Medtr1g102720.1 | emp24/gp25L/p24 family protein | HC |
           chr1:46427897-46425652 | 20130731
          Length = 213

 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 106/203 (52%), Gaps = 2/203 (0%)

Query: 10  LFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGVDL 69
           L  L+ +F  +   E +   +   EC    V YEGDTV  +FVV+  D  W     G+D 
Sbjct: 13  LMCLVFIF--VDRIESLSVTVQDVECLYEYVLYEGDTVSGNFVVVDHDIFWSSDHPGIDF 70

Query: 70  VVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYEQH 129
            V  P G  + D +  + +KF+F A   G++KFCF N     ET+ F +HVGH       
Sbjct: 71  TVTSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDL 130

Query: 130 AKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFESAALI 189
           AKDEH  P+  +IA+L EAL ++  EQ +L A+  R    N++  +R I   + E   L 
Sbjct: 131 AKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHKRVIFYTVGEYLLLA 190

Query: 190 GASALQVYLLQRLFERKLGTSRV 212
             SALQV  ++RLF + +  +RV
Sbjct: 191 AVSALQVIYIRRLFSKSVAYNRV 213


>Medtr8g088940.1 | emp24/gp25L/p24 family protein | HC |
           chr8:36955867-36958496 | 20130731
          Length = 211

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)

Query: 71  VKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCF----TNKSPYHETIDFDVHVGHFSY- 125
           V  P G  +H   + T   F F   ++G +  CF     N+  +  +++ D  +G  +  
Sbjct: 68  VTSPYGNNLHHKENTTHGSFAFTTQETGNYLACFWVDGGNQGGHEVSVNLDWKIGIAAKD 127

Query: 126 YEQHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFES 185
           ++  AK E    +  ++ KLE A+  I     +L+ +     IV++  + R    ++   
Sbjct: 128 WDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSERTNGRVAWFSIMSL 187

Query: 186 AALIGASALQVYLLQRLFERK 206
              IG SALQ++ L+R F++K
Sbjct: 188 GICIGVSALQLWHLKRFFQKK 208


>Medtr8g088980.1 | emp24/gp25L/p24 family protein | HC |
           chr8:36969976-36972612 | 20130731
          Length = 162

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)

Query: 71  VKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCF----TNKSPYHETIDFDVHVGHFSY- 125
           V  P G  +H   + T   F F   ++G +  CF     N+  +  +++ D  +G  +  
Sbjct: 19  VTSPYGNNLHHKENTTHGSFAFTTQETGNYLACFWVDGGNQGGHEVSVNLDWKIGIAAKD 78

Query: 126 YEQHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHKALFES 185
           ++  AK E    +  ++ KLE A+  I     +L+ +     IV++  + R    ++   
Sbjct: 79  WDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSERTNGRVAWFSIMSL 138

Query: 186 AALIGASALQVYLLQRLFERK 206
              IG SALQ++ L+R F++K
Sbjct: 139 GICIGVSALQLWHLKRFFQKK 159