Miyakogusa Predicted Gene

Lj2g3v3339370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339370.1 Non Characterized Hit- tr|Q6RF54|Q6RF54_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,60.34,0.00000000008,seg,NULL,gene.g44681.t1.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g097970.1 | hypothetical protein | HC | chr5:42903652-4290...   248   1e-66

>Medtr5g097970.1 | hypothetical protein | HC |
           chr5:42903652-42902274 | 20130731
          Length = 164

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/153 (78%), Positives = 132/153 (86%), Gaps = 1/153 (0%)

Query: 1   MVSGRDQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSPSQVLVYDFQP 60
           MV GR++VYVAAMPLRA+KGPPQLLMSAAY+LNIWDLQHFMVIIKP SSPSQVLV+DFQP
Sbjct: 11  MVRGREEVYVAAMPLRASKGPPQLLMSAAYSLNIWDLQHFMVIIKP-SSPSQVLVFDFQP 69

Query: 61  IDPEDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGYANSNAVEIASEYNKIWETNL 120
            DPEDIYVALAVLSGRAVPGA             CWLVGYA ++AVEIASE+NK WET+L
Sbjct: 70  KDPEDIYVALAVLSGRAVPGAVLVRKLKRLPRSKCWLVGYAEADAVEIASEFNKKWETDL 129

Query: 121 RIGLNDCRNYTNGLVRQLTGESDVLKRLRNLGS 153
           RIG+NDCR+YTNGLVR+L GE DVLKRLRN GS
Sbjct: 130 RIGVNDCRDYTNGLVRRLIGEEDVLKRLRNQGS 162