Miyakogusa Predicted Gene
- Lj2g3v3337560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3337560.1 Non Characterized Hit- tr|I3T0E0|I3T0E0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Chlorophyll
a-b binding protein,Chlorophyll a/b binding protein domain; SUBFAMILY
NOT NAMED,NULL; CH,CUFF.40111.1
(264 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g097280.1 | light-harvesting complex I chlorophyll A/B-bin... 481 e-136
Medtr6g012080.1 | light-harvesting complex I chlorophyll A/B-bin... 387 e-108
Medtr4g094605.1 | light-harvesting complex I chlorophyll A/B-bin... 385 e-107
Medtr6g011870.1 | light-harvesting complex I chlorophyll A/B-bin... 382 e-106
Medtr6g011880.1 | light-harvesting complex I chlorophyll A/B-bin... 382 e-106
Medtr6g011890.1 | light-harvesting complex I chlorophyll A/B-bin... 381 e-106
Medtr6g012110.1 | light-harvesting complex I chlorophyll A/B-bin... 379 e-105
Medtr2g081090.1 | light-harvesting complex I chlorophyll A/B-bin... 339 2e-93
Medtr2g081090.2 | light-harvesting complex I chlorophyll A/B-bin... 330 1e-90
Medtr6g043600.1 | light-harvesting complex I chlorophyll A/B-bin... 312 3e-85
Medtr6g060175.1 | light-harvesting complex I chlorophyll A/B-bin... 184 1e-46
Medtr1g026550.1 | light-harvesting complex I chlorophyll A/B-bin... 184 1e-46
Medtr6g060175.2 | light-harvesting complex I chlorophyll A/B-bin... 167 1e-41
Medtr5g098785.1 | light-harvesting complex I chlorophyll A/B-bin... 119 3e-27
Medtr8g023790.1 | light-harvesting complex I chlorophyll A/B-bin... 116 2e-26
Medtr5g098780.1 | light-harvesting complex I chlorophyll A/B-bin... 115 6e-26
Medtr1g026550.2 | light-harvesting complex I chlorophyll A/B-bin... 114 1e-25
Medtr6g033320.1 | light-harvesting complex I chlorophyll A/B-bin... 113 2e-25
Medtr3g101670.1 | light-harvesting complex I chlorophyll A/B-bin... 110 2e-24
Medtr2g042720.1 | light-harvesting complex I chlorophyll A/B-bin... 107 1e-23
Medtr3g435460.1 | light-harvesting complex I chlorophyll A/B-bin... 95 7e-20
Medtr4g015570.1 | light-harvesting complex I chlorophyll A/B-bin... 95 9e-20
Medtr3g435460.2 | light-harvesting complex I chlorophyll A/B-bin... 83 2e-16
Medtr5g098770.1 | light-harvesting complex I chlorophyll A/B-bin... 76 3e-14
Medtr3g070340.1 | light-harvesting complex I chlorophyll A/B-bin... 75 5e-14
Medtr2g008610.1 | light-harvesting complex I chlorophyll A/B-bin... 73 3e-13
Medtr2g436960.1 | light-harvesting complex I chlorophyll A/B-bin... 53 3e-07
>Medtr5g097280.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:42601906-42603573 |
20130731
Length = 265
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/264 (88%), Positives = 243/264 (92%)
Query: 1 MATSAIQQSAFTGQTALKQGNELLRKAGGFGKGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
MATSAIQQSAFTG+T LKQGNE +RKAG FG+ RFTMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1 MATSAIQQSAFTGKTGLKQGNEFIRKAGSFGQSRFTMRRTVKSAPESIWYGPDRPKYLGP 60
Query: 61 FSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILER 120
FSEQIPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCTFPEILE+
Sbjct: 61 FSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEK 120
Query: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXX 180
NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMG +EGYRV
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGP 180
Query: 181 XXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQ 240
AFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+Q
Sbjct: 181 LGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVQ 240
Query: 241 NLYDHVADPVANNAWAFATNFVPG 264
NLYDHVADPVANNAWA+ATNFVPG
Sbjct: 241 NLYDHVADPVANNAWAYATNFVPG 264
>Medtr6g012080.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3575571-3576676 |
20130731
Length = 265
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 213/267 (79%), Gaps = 6/267 (2%)
Query: 1 MATSAIQQSAFTGQTALKQGNELLRKAGGFGKGRFTMRRTV--KSAPQ-SIWYGPDRPKY 57
MATS + A + T + + +L GR TMR+T K+ P S WYGPDR KY
Sbjct: 1 MATSTM---ALSSSTMVGKAIKLSPSTPDLVMGRITMRKTTNKKNVPSGSPWYGPDRVKY 57
Query: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 117
LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+
Sbjct: 58 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 118 LERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVX 177
L RNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 118 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIA 177
Query: 178 XXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 238 PIQNLYDHVADPVANNAWAFATNFVPG 264
P++NL DH+ DPV NNAWAFATNFVPG
Sbjct: 238 PLENLADHITDPVNNNAWAFATNFVPG 264
>Medtr4g094605.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:38356454-38357760 |
20130731
Length = 266
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 214/268 (79%), Gaps = 7/268 (2%)
Query: 1 MATSAIQQSAFTGQTALKQGNELLRKAGGFGKGRFTMRRTVKS----APQSIWYGPDRPK 56
MA S++ A + T + +L + G RFTMR+ + + S WYGPDR K
Sbjct: 1 MAASSM---ALSSPTLAGKPVKLTPSSQELGAARFTMRKAATTKKVASSGSPWYGPDRVK 57
Query: 57 YLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPE 116
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE
Sbjct: 58 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 117
Query: 117 ILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRV 176
+L RNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWATQV+LMG +EGYR+
Sbjct: 118 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 177
Query: 177 XXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 178 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 237
Query: 237 GPIQNLYDHVADPVANNAWAFATNFVPG 264
GP++NL DH+ADPV NNAWA+ATNFVPG
Sbjct: 238 GPLENLADHLADPVNNNAWAYATNFVPG 265
>Medtr6g011870.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3563596-3564681 |
20130731
Length = 265
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/238 (78%), Positives = 202/238 (84%), Gaps = 3/238 (1%)
Query: 30 FGKGRFTMRR--TVKSAPQ-SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSA 86
G GR TMR+ T KS P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSA
Sbjct: 27 IGVGRVTMRKATTKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 86
Query: 87 DPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYL 146
DPETFAKNRELEVIHSRWAMLGALGC FPE+L RNGVKFGEAVWFKAG+QIFSEGGLDYL
Sbjct: 87 DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYL 146
Query: 147 GNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAF 206
GNP+L+HAQSILAIWA QV+LMG +EGYR+ +FDPLGLA+DP+AF
Sbjct: 147 GNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAF 206
Query: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI+NL DH+ADPV NNAWA+ATNF PG
Sbjct: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPG 264
>Medtr6g011880.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3569245-3570411 |
20130731
Length = 265
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/238 (78%), Positives = 202/238 (84%), Gaps = 3/238 (1%)
Query: 30 FGKGRFTMRRTV--KSAPQ-SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSA 86
G GR TMR+T KS P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSA
Sbjct: 27 IGVGRVTMRKTTTKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 86
Query: 87 DPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYL 146
DPETFAKNRELEVIHSRWAMLGALGC FPE+L RNGV+FGEAVWFKAG+QIFSEGGLDYL
Sbjct: 87 DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYL 146
Query: 147 GNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAF 206
GNP+L+HAQSILAIWA QV+LMG +EGYR+ +FDPLGLA+DP+AF
Sbjct: 147 GNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAF 206
Query: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI+NL DH+ADPV NNAWA+ATNF PG
Sbjct: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPG 264
>Medtr6g011890.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3572293-3573452 |
20130731
Length = 265
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/235 (78%), Positives = 201/235 (85%), Gaps = 3/235 (1%)
Query: 33 GRFTMRRTV--KSAPQ-SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPE 89
GR TMR+T K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 30 GRITMRKTTTKKNVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPE 89
Query: 90 TFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 149
TF+KNRELEVIHSRWAMLGALGC FPE+L RNGVKFGEAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 90 TFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149
Query: 150 NLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAEL 209
+L+HAQSILAIWA QV+LMG +EGYR+ +FDPLGLADDP+AFAEL
Sbjct: 150 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 209
Query: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
KVKELKNGRLAMFSMFGFFVQAIVTGKGPI+NL DH+ADPV NNAWA+ATNF PG
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPG 264
>Medtr6g012110.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3585659-3584433 |
20130731
Length = 265
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/235 (79%), Positives = 201/235 (85%), Gaps = 3/235 (1%)
Query: 33 GRFTMRRTVKS--APQ-SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPE 89
GR TMR+T AP S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 30 GRITMRKTTTKKTAPSGSQWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPE 89
Query: 90 TFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 149
TFAKNRELEVIHSRWAMLGALGC FPE+L RNGVKFGEAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 90 TFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149
Query: 150 NLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAEL 209
+L+HAQSILAIWA QV+LMG +EGYR+ +FDPLGLA+DP+AFAEL
Sbjct: 150 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
KVKELKNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWAFATNFVPG
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLKNLADHIADPVNNNAWAFATNFVPG 264
>Medtr2g081090.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993832-33992362 |
20130731
Length = 264
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 193/262 (73%), Gaps = 11/262 (4%)
Query: 5 AIQQSAFTGQTALKQGNELLRKAGGFGKGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQ 64
++Q+ F GQ K LR G RFTM +WYGPDR KYLGPFS Q
Sbjct: 11 VVKQTPFLGQR--KGAANPLRDVVAMGTSRFTMG-------NELWYGPDRVKYLGPFSAQ 61
Query: 65 IPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILER-NGV 123
PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC PE+LE+ V
Sbjct: 62 TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRV 121
Query: 124 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXX 183
F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QVVLMGL+EG+R+
Sbjct: 122 DFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVG 181
Query: 184 XXXXXXXXXA-FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNL 242
FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL
Sbjct: 182 EGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 241
Query: 243 YDHVADPVANNAWAFATNFVPG 264
DH+ +PVANNAW +AT FVPG
Sbjct: 242 LDHIDNPVANNAWVYATKFVPG 263
>Medtr2g081090.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993824-33992362 |
20130731
Length = 237
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 178/221 (80%), Gaps = 2/221 (0%)
Query: 46 QSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105
+WYGPDR KYLGPFS Q PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 16 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 75
Query: 106 MLGALGCTFPEILER-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQ 164
MLGALGC PE+LE+ V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 76 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 135
Query: 165 VVLMGLIEGYRVXXX-XXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFS 223
VVLMGL+EG+R+ FDPLGLADDP FAELKVKE+KNGRLAMFS
Sbjct: 136 VVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFS 195
Query: 224 MFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
MFGFFVQAIVTGKGP++NL DH+ +PVANNAW +AT FVPG
Sbjct: 196 MFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPG 236
>Medtr6g043600.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:13275588-13276379 |
20130731
Length = 229
Score = 312 bits (799), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 173/234 (73%), Gaps = 20/234 (8%)
Query: 31 GKGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET 90
GKG T K + S WYGPDR KYLGPF + PSYLTGEFPGDYGW+TAGLSADPET
Sbjct: 15 GKGHHEKTTTKKVSSGSPWYGPDRVKYLGPFFGEAPSYLTGEFPGDYGWNTAGLSADPET 74
Query: 91 FAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 150
FAKNRELEVIHSRWAM WFKA +QIFSEGGLDYLGNP+
Sbjct: 75 FAKNRELEVIHSRWAMFDR--------------------WFKARSQIFSEGGLDYLGNPS 114
Query: 151 LIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELK 210
L+HAQSILAIWA QV+LMG +EGYR+ +FDPLGLADDP+AF ELK
Sbjct: 115 LVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVELK 174
Query: 211 VKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
VKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWAFATNFV G
Sbjct: 175 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVLG 228
>Medtr6g060175.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668553-20672457 |
20130731
Length = 289
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 133/218 (61%), Gaps = 9/218 (4%)
Query: 40 TVKSAPQSIWYGPDRPKYLGP---FSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
T S + WYGPDR +L +IP YLTGE PGDYG+D GLS PE FAK +
Sbjct: 62 TPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQG 121
Query: 97 LEVIHSRWAMLGALGCTFPEILERNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 155
E+IH+RWAMLGA G PE + G G EAVWFK GA + G L+Y G P I+
Sbjct: 122 YELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPIN-- 179
Query: 156 SILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELK 215
++ +VVL+G E YR+ FDPLGLA+DPD A LKVKE+K
Sbjct: 180 -LIVAVVAEVVLLGGAEYYRITNGLELEDKFHPGG--PFDPLGLANDPDQAAILKVKEIK 236
Query: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
NGRLAMF+M GFF+QA VTG+GP++NL H++DP NN
Sbjct: 237 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 274
>Medtr1g026550.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8663216 |
20130731
Length = 333
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 131/226 (57%), Gaps = 11/226 (4%)
Query: 39 RTVKSAPQSIWYGPDRPKYLGPFS-EQIPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
+ K+ QS WYG RP++LGP S + PSYL GE PGDYG+D AGL+ DP K
Sbjct: 97 QAAKARKQSFWYGQGRPRWLGPISYDGYPSYLHGELPGDYGFDIAGLAKDPVELQKYFNF 156
Query: 98 EVIHSRWAMLGALGCTFPEILERNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHA 154
E++H+RWAML ++G PE+L+ GV F E VW++ G LDYLG P +L +
Sbjct: 157 EILHARWAMLASVGALIPELLDLLGVFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGS 216
Query: 155 QSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXX-------XXAFDPLGLADDPDAFA 207
Q ++ I Q +LM E R FDPL L+ DP+AF
Sbjct: 217 QGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFE 276
Query: 208 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
ELKVKE+KNGRLAM + GFF QA +TGKGP+QN+ DH+ DP NN
Sbjct: 277 ELKVKEIKNGRLAMMAWLGFFTQAALTGKGPVQNIVDHIYDPFHNN 322
>Medtr6g060175.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668922-20672420 |
20130731
Length = 279
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 126/218 (57%), Gaps = 19/218 (8%)
Query: 40 TVKSAPQSIWYGPDRPKYLGP---FSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
T S + WYGPDR +L +IP YLTGE PGDYG+D GLS PE FAK
Sbjct: 62 TPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAK--- 118
Query: 97 LEVIHSRWAMLGALGCTFPEILERNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 155
WAMLGA G PE + G G EAVWFK GA + G L+Y G P I+
Sbjct: 119 -------WAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPIN-- 169
Query: 156 SILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELK 215
++ +VVL+G E YR+ FDPLGLA+DPD A LKVKE+K
Sbjct: 170 -LIVAVVAEVVLLGGAEYYRITNGLELEDKFHPGG--PFDPLGLANDPDQAAILKVKEIK 226
Query: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
NGRLAMF+M GFF+QA VTG+GP++NL H++DP NN
Sbjct: 227 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 264
>Medtr5g098785.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43261216-43258628 |
20130731
Length = 277
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 135/283 (47%), Gaps = 44/283 (15%)
Query: 1 MATSA-IQQSAFT-GQTALKQ---GNELLRKAGGFGKGRFTMRRTVKSAPQSIWYGPDRP 55
MAT A + S+ T A++Q L G KG F ++ S+P G +R
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVK--AASSPPVKQNGANRQ 58
Query: 56 KYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGA 109
+ S+Q SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA
Sbjct: 59 LWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGA 115
Query: 110 LGCTFPEILERNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVL 167
G PEIL + G+ E WF+ G I G +Y + ++ ++
Sbjct: 116 AGAIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAF 166
Query: 168 MGLIEGYR-----------------VXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELK 210
MG E R + F+PLG D + ELK
Sbjct: 167 MGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELK 226
Query: 211 VKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
+KE+KNGRLAM ++ G+F+QA+VTG GP QNL DH+ADPV NN
Sbjct: 227 LKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>Medtr8g023790.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr8:8653598-8650676 |
20130731
Length = 268
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111
PDRP + P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G
Sbjct: 61 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAG 118
Query: 112 CTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----TQVV 166
PE L + G+ W+ AG Q + + L + I WA ++
Sbjct: 119 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELIFIGWAEGRRWADIL 171
Query: 167 LMGLIEGYRVXXXXXXXXXXXXXXXXA-FDPLGLAD-DPDAFAELKVKELKNGRLAMFSM 224
G + + FDPLG P EL+ KE+KNGRLAM ++
Sbjct: 172 NPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAV 231
Query: 225 FGFFVQAIVTGKGPIQNLYDHVADP 249
G + Q I TG GPI NL+ H+ADP
Sbjct: 232 MGAWFQHIYTGTGPIDNLFAHLADP 256
>Medtr5g098780.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43257471-43255552 |
20130731
Length = 275
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 62 SEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE------VIHSRWAMLGALGCTFP 115
S+Q SYL G PGD+G+D GLS DPE E E +I+ R+AMLGA G P
Sbjct: 61 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 119
Query: 116 EILERNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEG 173
EIL + G+ E WF+ G I G +Y + ++ ++ MG E
Sbjct: 120 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 170
Query: 174 YRVX-----------------XXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKN 216
R+ F+PLG D + ELK+KE+KN
Sbjct: 171 RRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 230
Query: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
GRLAM ++ G+F+QA+VTG GP QNL DH+ADPV NN
Sbjct: 231 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 267
>Medtr1g026550.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8662520 |
20130731
Length = 241
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Query: 39 RTVKSAPQSIWYGPDRPKYLGPFS-EQIPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
+ K+ QS WYG RP++LGP S + PSYL GE PGDYG+D AGL+ DP K
Sbjct: 97 QAAKARKQSFWYGQGRPRWLGPISYDGYPSYLHGELPGDYGFDIAGLAKDPVELQKYFNF 156
Query: 98 EVIHSRWAMLGALGCTFPEILERNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHA 154
E++H+RWAML ++G PE+L+ GV F E VW++ G LDYLG P +L +
Sbjct: 157 EILHARWAMLASVGALIPELLDLLGVFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGS 216
Query: 155 QSILAIWATQVVLMGLI 171
Q ++ I Q +LM ++
Sbjct: 217 QGVVVIAICQALLMVML 233
>Medtr6g033320.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:10652924-10650230 |
20130731
Length = 242
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKF 125
PSYL G PGD+G+D L PE + +E E+IH RWAML G PE L
Sbjct: 56 PSYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL------- 108
Query: 126 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXX 184
G W KA GG YLGNP + ++ I + + + +E R
Sbjct: 109 GLGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDP 163
Query: 185 XXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIQNLY 243
AFDPLG + DP F E K+KE+KNGRLA+ + G VQ G GP++NL
Sbjct: 164 EKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQTAYPGTGPLENLA 223
Query: 244 DHVADPVANN 253
H+ADP NN
Sbjct: 224 THLADPWHNN 233
>Medtr3g101670.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:46810944-46809109 |
20130731
Length = 267
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 41/247 (16%)
Query: 20 GNELLRKAGGFGKGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGW 79
G+ LR A G G + + +A Q RP +L P+YL G PGD+G+
Sbjct: 31 GHHWLRPAAA-GTGVTPRCKQICAAAQ------QRPTWLPGLDP--PTYLDGTLPGDFGF 81
Query: 80 DTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFS 139
D GL DPE+ + E++HSR+AMLG LG ++L GV +WF+AGA +
Sbjct: 82 DPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDLLRVAGVN-SIPIWFEAGAVKY- 139
Query: 140 EGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFD---- 195
++ L+ Q++LMG E R +
Sbjct: 140 ----EFANTGTLV---------VVQLLLMGYAETRRYMDFVSPGSQAKEGSFFGLEASLG 186
Query: 196 -------------PLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNL 242
PLGLA D + E K+KE+KNGRLAM ++ G FVQA VT GPI NL
Sbjct: 187 GLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNL 246
Query: 243 YDHVADP 249
+H+++P
Sbjct: 247 VEHLSNP 253
>Medtr2g042720.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:18633760-18631754 |
20130731
Length = 267
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111
PDRP + P S P +L G PGD+G+D GL +DPE + E++H+RWAMLG G
Sbjct: 60 PDRPLWF-PGSSP-PEWLDGSLPGDFGFDPLGLGSDPELLKWLAQAELMHARWAMLGVSG 117
Query: 112 CTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLI 171
PEILE+ G W+ AG+ ++Y +P ++ Q+ LMG +
Sbjct: 118 ILIPEILEKIGY-VKNFSWYNAGS-------VEYFADPT--------TLFIVQLALMGWV 161
Query: 172 EGYR---------------VXXXXXXXXXXXXXXXXAFDPLGLAD-DPDAFAELKVKELK 215
EG R + FDP+ P+ L+ KE+K
Sbjct: 162 EGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIK 221
Query: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADP 249
NGRLAM + GF QA+ G PI NL H+ADP
Sbjct: 222 NGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADP 255
>Medtr3g435460.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11610138-11613272 |
20130731
Length = 253
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKF 125
P YLTG PGD G+D GL+ DPE + E+++ RWAMLG G PE+ G+
Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGI-I 121
Query: 126 GEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXX 184
W+ AG + F+ ++ L H I W + G + +
Sbjct: 122 NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRR-W-QDIKNPGSVNQDPIFKQYSLPK 179
Query: 185 XXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYD 244
F+PL A +A K KE+ NGRLAM + GF +Q VTGKGP NL
Sbjct: 180 GEVGYPGGIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQ 235
Query: 245 HVADPVAN 252
H++DP N
Sbjct: 236 HLSDPWHN 243
>Medtr4g015570.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:4673903-4671256 |
20130731
Length = 289
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 113/265 (42%), Gaps = 63/265 (23%)
Query: 29 GFGKGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88
GFGK + ++ +S+P + DRP + + P +L G GDYG+D GL
Sbjct: 34 GFGKKKAAPKKPSRSSPST-----DRPLWFP--GAKSPEWLDGSLVGDYGFDPFGLGKPA 86
Query: 89 E-----------TFAKN--------------------------------RELEVIHSRWA 105
E AKN RE E+IH RWA
Sbjct: 87 EYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHGRWA 146
Query: 106 MLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQV 165
ML LG E L GV W AG EG YLG P +++ I +V
Sbjct: 147 MLATLGALTVEWL--TGV-----TWQDAGKVELVEGS-TYLGQPLPFSITTLIWI---EV 195
Query: 166 VLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKELKNGRLAMFSMF 225
+++G IE R FDPLGLA DP+ A L++ E+K+ RLAM +
Sbjct: 196 LVIGYIEFQR--NAELDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVAFL 253
Query: 226 GFFVQAIVTGKGPIQNLYDHVADPV 250
GF VQA TGKGP+ N H++DP+
Sbjct: 254 GFAVQAAATGKGPLNNWATHLSDPL 278
>Medtr3g435460.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11611493-11613272 |
20130731
Length = 192
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFK 132
PGD G+D GL+ DPE + E+++ RWAMLG G PE+ G+ W+
Sbjct: 9 LPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGI-INVPKWYD 67
Query: 133 AGAQ-IFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXX 191
AG + F+ ++ L H I W + G + +
Sbjct: 68 AGKEEYFASSSTLFVIEFILFHYVEIRR-W-QDIKNPGSVNQDPIFKQYSLPKGEVGYPG 125
Query: 192 XAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVA 251
F+PL A +A K KE+ NGRLAM + GF +Q VTGKGP NL H++DP
Sbjct: 126 GIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWH 181
Query: 252 N 252
N
Sbjct: 182 N 182
>Medtr5g098770.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43247918-43247634 |
20130731
Length = 94
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 194 FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
F+PLG D + +LK+KE+KNGRLAM ++ G+FVQA+VT GP QN +H+ADP NN
Sbjct: 27 FNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTRVGPYQNFLNHLADPSNNN 86
>Medtr3g070340.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:31536436-31533674 |
20130731
Length = 278
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 95 RELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 154
RE EVIH RWAMLGALG E F W AG EG Y G +L +
Sbjct: 139 RECEVIHGRWAMLGALGALAVE-------AFTGVAWQDAGKVELVEGS-SYFGF-SLPFS 189
Query: 155 QSILAIWATQVVLMGLIEGYRVXXXXXXXXXXXXXXXXAFDPLGLADDPDAFAELKVKEL 214
S L IW +V+++G IE R FDPLGLA DP+ L++ E+
Sbjct: 190 ISTL-IW-IEVLVIGYIEFQR--NAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEI 245
Query: 215 KNGRLAMFSMFGFFVQAIVTGKGPI 239
K+ RLAM F +QA VTGKGPI
Sbjct: 246 KHSRLAMVVFLIFAIQAAVTGKGPI 270
>Medtr2g008610.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:1552950-1554469 |
20130731
Length = 261
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 81/207 (39%), Gaps = 50/207 (24%)
Query: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILERNGVKF 125
P +L G PGD+G+D GL DP RE E+IH RWAM LG G +
Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 125
Query: 126 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGLIEGYR---------- 175
WF+AGA +PN I S + TQ++LMG +E R
Sbjct: 126 SGVPWFEAGA------------DPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQ 173
Query: 176 -----------VXXXXXXXXXXXXXXXXAFDPLGLAD---------DPDAFAELKVKELK 215
FDPL LA D + LK+ E+K
Sbjct: 174 SIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIK 233
Query: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNL 242
+ RLAM +M F+ +A GK P+ L
Sbjct: 234 HARLAMLAMLIFYFEA-GQGKTPLGAL 259
>Medtr2g436960.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:14456001-14454918 |
20130731
Length = 102
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 194 FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVAN 252
F+PL A +A K KE+ NGRLAM + GF Q VTGKG NL +H++DP N
Sbjct: 38 FNPLNFAPTLEA----KEKEISNGRLAMLAFLGFISQHNVTGKGRFDNLLEHLSDPWHN 92