Miyakogusa Predicted Gene

Lj2g3v3336110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3336110.1 Non Characterized Hit- tr|G7J261|G7J261_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,63.29,6e-17,seg,NULL,CUFF.40026.1
         (134 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g096855.1 | hypothetical protein | HC | chr5:42377222-4237...    87   3e-18
Medtr3g061570.1 | hypothetical protein | HC | chr3:24579713-2457...    87   4e-18
Medtr1g052770.1 | hypothetical protein | HC | chr1:21723890-2172...    61   2e-10
Medtr7g092040.1 | hypothetical protein | HC | chr7:36428916-3642...    46   1e-05

>Medtr5g096855.1 | hypothetical protein | HC |
           chr5:42377222-42376845 | 20130731
          Length = 125

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 8/100 (8%)

Query: 34  QHPQSQKLEAFSANXXXXXXXXXXXXXEVAEVS-TISVCCSTPKGQKFKIPEISTCPPAP 92
           QH QS++ E  S N              V +VS T +  CSTPKG+KF+IPEISTCPPAP
Sbjct: 32  QHLQSKQQETSSENCSSNMDSVKV----VDDVSITSNSLCSTPKGKKFRIPEISTCPPAP 87

Query: 93  KKPRVLSNRSLRRSPLAFFAPLDLEVFFSVALRDVPVSFV 132
           KK RVLSN SLRRS   FFA  DLE F  VAL+D   SFV
Sbjct: 88  KKQRVLSNFSLRRS---FFATPDLEKFLCVALQDSLASFV 124


>Medtr3g061570.1 | hypothetical protein | HC |
           chr3:24579713-24577994 | 20130731
          Length = 142

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 46/53 (86%)

Query: 72  CSTPKGQKFKIPEISTCPPAPKKPRVLSNRSLRRSPLAFFAPLDLEVFFSVAL 124
           CSTPKGQK++IPEISTCPPAPKK RV+SN SLRRSPL+FF P DLE FF V L
Sbjct: 90  CSTPKGQKYRIPEISTCPPAPKKQRVVSNCSLRRSPLSFFVPPDLEHFFLVTL 142


>Medtr1g052770.1 | hypothetical protein | HC |
           chr1:21723890-21724510 | 20130731
          Length = 107

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 72  CSTPKGQKFKIPEISTCPPAPKKPRVL---SNRSLRRSPLAFFAPLDLEVFFSVALRDVP 128
           CSTPK ++F+IP++ TCPPAPKK RV    +  S+ RSP++ F+  D+E+FF  AL +V 
Sbjct: 47  CSTPKAKRFRIPKVLTCPPAPKKRRVTPPSACSSINRSPISLFSSPDIELFFFSALNNVS 106

Query: 129 V 129
           V
Sbjct: 107 V 107


>Medtr7g092040.1 | hypothetical protein | HC |
           chr7:36428916-36428581 | 20130731
          Length = 111

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 6/65 (9%)

Query: 62  VAEVSTISVCCS----TPKGQKFKIPEISTCPPAPKKPRVLSNRSLRRSPLAFFAPLDLE 117
           V EV+  ++C S    TPKG++FKIPEI  CPPAPK+ R       R S  +F +P ++E
Sbjct: 43  VEEVNEENICSSDGFTTPKGKRFKIPEIIDCPPAPKRKRTWKCPPFRTS-KSFSSP-EIE 100

Query: 118 VFFSV 122
           +F + 
Sbjct: 101 LFLTT 105