Miyakogusa Predicted Gene
- Lj2g3v3336110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3336110.1 Non Characterized Hit- tr|G7J261|G7J261_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,63.29,6e-17,seg,NULL,CUFF.40026.1
(134 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g096855.1 | hypothetical protein | HC | chr5:42377222-4237... 87 3e-18
Medtr3g061570.1 | hypothetical protein | HC | chr3:24579713-2457... 87 4e-18
Medtr1g052770.1 | hypothetical protein | HC | chr1:21723890-2172... 61 2e-10
Medtr7g092040.1 | hypothetical protein | HC | chr7:36428916-3642... 46 1e-05
>Medtr5g096855.1 | hypothetical protein | HC |
chr5:42377222-42376845 | 20130731
Length = 125
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 8/100 (8%)
Query: 34 QHPQSQKLEAFSANXXXXXXXXXXXXXEVAEVS-TISVCCSTPKGQKFKIPEISTCPPAP 92
QH QS++ E S N V +VS T + CSTPKG+KF+IPEISTCPPAP
Sbjct: 32 QHLQSKQQETSSENCSSNMDSVKV----VDDVSITSNSLCSTPKGKKFRIPEISTCPPAP 87
Query: 93 KKPRVLSNRSLRRSPLAFFAPLDLEVFFSVALRDVPVSFV 132
KK RVLSN SLRRS FFA DLE F VAL+D SFV
Sbjct: 88 KKQRVLSNFSLRRS---FFATPDLEKFLCVALQDSLASFV 124
>Medtr3g061570.1 | hypothetical protein | HC |
chr3:24579713-24577994 | 20130731
Length = 142
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 46/53 (86%)
Query: 72 CSTPKGQKFKIPEISTCPPAPKKPRVLSNRSLRRSPLAFFAPLDLEVFFSVAL 124
CSTPKGQK++IPEISTCPPAPKK RV+SN SLRRSPL+FF P DLE FF V L
Sbjct: 90 CSTPKGQKYRIPEISTCPPAPKKQRVVSNCSLRRSPLSFFVPPDLEHFFLVTL 142
>Medtr1g052770.1 | hypothetical protein | HC |
chr1:21723890-21724510 | 20130731
Length = 107
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 72 CSTPKGQKFKIPEISTCPPAPKKPRVL---SNRSLRRSPLAFFAPLDLEVFFSVALRDVP 128
CSTPK ++F+IP++ TCPPAPKK RV + S+ RSP++ F+ D+E+FF AL +V
Sbjct: 47 CSTPKAKRFRIPKVLTCPPAPKKRRVTPPSACSSINRSPISLFSSPDIELFFFSALNNVS 106
Query: 129 V 129
V
Sbjct: 107 V 107
>Medtr7g092040.1 | hypothetical protein | HC |
chr7:36428916-36428581 | 20130731
Length = 111
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 62 VAEVSTISVCCS----TPKGQKFKIPEISTCPPAPKKPRVLSNRSLRRSPLAFFAPLDLE 117
V EV+ ++C S TPKG++FKIPEI CPPAPK+ R R S +F +P ++E
Sbjct: 43 VEEVNEENICSSDGFTTPKGKRFKIPEIIDCPPAPKRKRTWKCPPFRTS-KSFSSP-EIE 100
Query: 118 VFFSV 122
+F +
Sbjct: 101 LFLTT 105