Miyakogusa Predicted Gene

Lj2g3v3319250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3319250.1 Non Characterized Hit- tr|G7K4T5|G7K4T5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,51.9,2e-18,
,gene.g44568.t1.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g096680.1 | late embryogenesis abundant protein | HC | chr...    96   6e-21

>Medtr5g096680.1 | late embryogenesis abundant protein | HC |
           chr5:42286627-42285582 | 20130731
          Length = 238

 Score = 96.3 bits (238), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 67/79 (84%)

Query: 14  NWLISSKSIKPFSQRLGETRLQSVQFMSSLVFLPQDVGVKLQRQVQSNRINYNARGTFKE 73
           N +I+S+SIKPF+Q+  ETR ++V+F+S+L+F+PQ+VGV+LQR++Q+NR++  A+GTFK 
Sbjct: 141 NRVIASQSIKPFTQKPKETRYETVRFISTLLFMPQEVGVRLQRELQNNRLSCYAKGTFKV 200

Query: 74  RFYMDLVHLSYWLHSICYL 92
           +  M ++H S+WLHS+C +
Sbjct: 201 KVNMWILHSSFWLHSVCQI 219