Miyakogusa Predicted Gene

Lj2g3v3318970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3318970.1 Non Characterized Hit- tr|J3MFF7|J3MFF7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G2,76.67,0.00004,no description,Aldehyde dehydrogenase,
N-terminal,NODE_119728_length_873_cov_11.495991.path2.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g083530.1 | cytosolic aldehyde dehydrogenase RF2C | HC | c...    51   3e-07
Medtr8g083530.2 | cytosolic aldehyde dehydrogenase RF2C | HC | c...    50   3e-07
Medtr6g086340.1 | cytosolic aldehyde dehydrogenase | HC | chr6:3...    50   5e-07

>Medtr8g083530.1 | cytosolic aldehyde dehydrogenase RF2C | HC |
           chr8:43624798-43628365 | 20130731
          Length = 503

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 1   MFFSKVSPPLAVGCTMVLKPAEKTTLSSHF 30
           +FF+KVSP LA GCTMVLKPAE+T LS+ F
Sbjct: 176 VFFTKVSPSLAAGCTMVLKPAEQTPLSALF 205


>Medtr8g083530.2 | cytosolic aldehyde dehydrogenase RF2C | HC |
           chr8:43624798-43627499 | 20130731
          Length = 373

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 1   MFFSKVSPPLAVGCTMVLKPAEKTTLSSHF 30
           +FF+KVSP LA GCTMVLKPAE+T LS+ F
Sbjct: 176 VFFTKVSPSLAAGCTMVLKPAEQTPLSALF 205


>Medtr6g086340.1 | cytosolic aldehyde dehydrogenase | HC |
           chr6:32430826-32435886 | 20130731
          Length = 500

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 1   MFFSKVSPPLAVGCTMVLKPAEKTTLSSHF 30
           MFF+K +P LA GCTMVLKPAE+T LSS F
Sbjct: 173 MFFAKAAPCLAAGCTMVLKPAEQTPLSSLF 202