Miyakogusa Predicted Gene
- Lj2g3v3248940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3248940.1 Non Characterized Hit- tr|I1M6I7|I1M6I7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46432 PE,71.57,0,no
description,Nucleotide-binding, alpha-beta plait; RRM,RNA recognition
motif domain; ZF_C3H1,Zinc ,CUFF.39930.1
(512 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g094700.1 | RNA-binding domain CCCH-type zinc finger prote... 723 0.0
Medtr3g056160.1 | RNA-binding domain CCCH-type zinc finger prote... 570 e-162
Medtr3g056160.2 | RNA-binding domain CCCH-type zinc finger prote... 570 e-162
Medtr3g436060.1 | RNA-binding domain CCCH-type zinc finger prote... 197 3e-50
Medtr0005s0130.1 | RNA-binding domain CCCH-type zinc finger prot... 187 2e-47
Medtr4g043660.1 | RNA-binding domain CCCH-type zinc finger prote... 187 2e-47
Medtr4g043660.2 | RNA-binding domain CCCH-type zinc finger prote... 187 2e-47
Medtr5g008900.1 | zinc finger CCCH domain protein | HC | chr5:19... 162 6e-40
>Medtr5g094700.1 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr5:41381585-41375614 | 20130731
Length = 548
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/517 (69%), Positives = 414/517 (80%), Gaps = 16/517 (3%)
Query: 2 DYTRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDLQRL 61
+YTRIVFDKIQKFEPE+A KIIGYLLLQDNGEQ+MA+LASCPD IGEV FK LQ L
Sbjct: 5 EYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKA---LQML 61
Query: 62 AIKSAVIPILP---NPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTNPEYRA 118
A+ S ++PI P NPQQGLSH +SP SP NFQVPS YWDP S +N NPE+
Sbjct: 62 AVNSTMMPIPPPNVNPQQGLSHFPALSPS---SPLNFQVPSSYWDPQST--SNANPEFTG 116
Query: 119 MNYLDSMIELQKQTQLLSLEDHIEPANTGTGGIGIPSDYFGLDASAANVGGKSGRRFS-- 176
MNY+DS++ELQKQTQLLSLE+H++ NTGT G+ + GLD+SA N GGK+ +RFS
Sbjct: 117 MNYMDSLVELQKQTQLLSLENHLDHVNTGTRGLVVNEYNNGLDSSAVNFGGKATKRFSNS 176
Query: 177 SLSEFPLKICHYFNKGYCKHGTNCRYYHGHVLPENFSQMYGNDTNS--EDQVFSQGSLAQ 234
S+SEFPLKICHYF+KGYC+HG NCRY+HG V E+FS M+GN+ N+ ED V S GSLAQ
Sbjct: 177 SMSEFPLKICHYFSKGYCRHGGNCRYFHGQVPHESFSHMHGNNDNTSNEDPVISPGSLAQ 236
Query: 235 LESEIIELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQL 294
+ESEIIELLKQ+RG+PMSIASLPMAYYD+YKKVLQA GYLTESQRHGKSGY+LTKLL +L
Sbjct: 237 IESEIIELLKQRRGNPMSIASLPMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARL 296
Query: 295 NGSIRLISRPHGQHAVVLAEDAPKYIREGDSAQNISASRQIYLTFPADSTFTEEDVSDYF 354
N SIRLI RPHGQHAVVLAEDAPKYI++GDS QNISASRQIYLTFPADSTFTEEDV++YF
Sbjct: 297 N-SIRLIDRPHGQHAVVLAEDAPKYIQKGDSVQNISASRQIYLTFPADSTFTEEDVAEYF 355
Query: 355 NTFGCVEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLVKPYKEKAKTLE 414
N FG VEDVRIPCQQ+RMFGFVTFADPETV+MIL+KGNPHYVRGSRVLVKPY+EK K +E
Sbjct: 356 NAFGYVEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHYVRGSRVLVKPYREKTKVVE 415
Query: 415 RKYGDRGEHSVYCSPHYVDLDSELDSMPISTGNHRSIRRQLIEEQEXXXXXXXXXXXXXX 474
R+Y DR EHSV C H+ ++DSELDS+P S GNHRS+ RQL+EEQE
Sbjct: 416 RRYHDRMEHSVCCPHHFANIDSELDSIPRSYGNHRSLSRQLMEEQEQAFELQRRRLAQLQ 475
Query: 475 XXXXPLSTSPHFGVSIDELRVPDDNFNLQPSESLSSA 511
P SPHFG +D LRVPDD+FN Q E L+ A
Sbjct: 476 FTRRPFPISPHFGFPMDALRVPDDHFNFQAVEPLNHA 512
>Medtr3g056160.1 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr3:22346532-22343026 | 20130731
Length = 529
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/510 (58%), Positives = 364/510 (71%), Gaps = 33/510 (6%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDLQRLAI 63
TRIV DKIQ+FEPEHA+KIIGYLL+QDNGEQ++AKLAS PD I EVA K +T+LQ++A
Sbjct: 7 TRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTELQKMAT 66
Query: 64 KSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTNPEYRAMNYLD 123
+S VIS N SP +FQV SPY++ + NT+PE+ +
Sbjct: 67 RS-----------------VISSGN-SSPASFQVHSPYYN-----HGNTSPEFMTI---- 99
Query: 124 SMIELQKQTQLLSLEDH--IEPANTGTGGIGIPSDYFGLDASAANVGGKSGRRFSSLSEF 181
E Q T L E+H ++ N+ T + Y ++ AN+ GK +RFS+++EF
Sbjct: 100 GTTEHQTHTALFGSENHHHVDSVNSTTDNYDCYNYYLEYASAVANLNGKISKRFSNMTEF 159
Query: 182 PLKICHYFNKGYCKHGTNCRYYH-GHVLPENFSQMYGNDTNSED-QVFSQGSLAQLESEI 239
P K CHYF+KGYC+HG +CR+YH G + + S MYGND + D Q S GSLAQLESEI
Sbjct: 160 PFKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDAAANDEQAISPGSLAQLESEI 219
Query: 240 IELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQLNGSIR 299
++LLKQ RG+P+SIASLPMAYYD+YKKVLQA+GYL ESQRHGKSGYNLTKLL +L SIR
Sbjct: 220 VDLLKQ-RGNPISIASLPMAYYDKYKKVLQAEGYLAESQRHGKSGYNLTKLLIRLRNSIR 278
Query: 300 LISRPHGQHAVVLAEDAPKYIREGDSAQNISASRQIYLTFPADSTFTEEDVSDYFNTFGC 359
LI RPHGQHAVVLAEDAPK++ + D QNISAS+QIYLTFPADSTF+EEDVS+YF TFG
Sbjct: 279 LIDRPHGQHAVVLAEDAPKFMGKAD-CQNISASQQIYLTFPADSTFSEEDVSNYFGTFGS 337
Query: 360 VEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLVKPYKEKAKTLERKYGD 419
VEDVRIPCQQRRMFGFVTF +PETVKMIL+KGNPHYVRGSRVLVKPYKEK K ++RKY
Sbjct: 338 VEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVRGSRVLVKPYKEKPKLIDRKYPY 397
Query: 420 RGEHSVYCSPHYVDLDSELDSMPISTGNHRSIRRQLIEEQEXXXXXXXXXXXXXXXXXXP 479
R EH V SP Y D+D+E+ S P S GN R + R L+EEQ+
Sbjct: 398 RVEHHVCYSPRYADIDAEIASSPRSCGNPRYLTRLLLEEQDRIFELQRRRLALLQIAQKS 457
Query: 480 LSTSPHFGVSIDELRVPDDNFNLQPSESLS 509
LS+ PHFG++++ RV DD+FN+Q +ES S
Sbjct: 458 LSSPPHFGINMNASRVSDDHFNVQATESFS 487
>Medtr3g056160.2 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr3:22346532-22342932 | 20130731
Length = 529
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/510 (58%), Positives = 364/510 (71%), Gaps = 33/510 (6%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDLQRLAI 63
TRIV DKIQ+FEPEHA+KIIGYLL+QDNGEQ++AKLAS PD I EVA K +T+LQ++A
Sbjct: 7 TRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTELQKMAT 66
Query: 64 KSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTNPEYRAMNYLD 123
+S VIS N SP +FQV SPY++ + NT+PE+ +
Sbjct: 67 RS-----------------VISSGN-SSPASFQVHSPYYN-----HGNTSPEFMTI---- 99
Query: 124 SMIELQKQTQLLSLEDH--IEPANTGTGGIGIPSDYFGLDASAANVGGKSGRRFSSLSEF 181
E Q T L E+H ++ N+ T + Y ++ AN+ GK +RFS+++EF
Sbjct: 100 GTTEHQTHTALFGSENHHHVDSVNSTTDNYDCYNYYLEYASAVANLNGKISKRFSNMTEF 159
Query: 182 PLKICHYFNKGYCKHGTNCRYYH-GHVLPENFSQMYGNDTNSED-QVFSQGSLAQLESEI 239
P K CHYF+KGYC+HG +CR+YH G + + S MYGND + D Q S GSLAQLESEI
Sbjct: 160 PFKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDAAANDEQAISPGSLAQLESEI 219
Query: 240 IELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQLNGSIR 299
++LLKQ RG+P+SIASLPMAYYD+YKKVLQA+GYL ESQRHGKSGYNLTKLL +L SIR
Sbjct: 220 VDLLKQ-RGNPISIASLPMAYYDKYKKVLQAEGYLAESQRHGKSGYNLTKLLIRLRNSIR 278
Query: 300 LISRPHGQHAVVLAEDAPKYIREGDSAQNISASRQIYLTFPADSTFTEEDVSDYFNTFGC 359
LI RPHGQHAVVLAEDAPK++ + D QNISAS+QIYLTFPADSTF+EEDVS+YF TFG
Sbjct: 279 LIDRPHGQHAVVLAEDAPKFMGKAD-CQNISASQQIYLTFPADSTFSEEDVSNYFGTFGS 337
Query: 360 VEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLVKPYKEKAKTLERKYGD 419
VEDVRIPCQQRRMFGFVTF +PETVKMIL+KGNPHYVRGSRVLVKPYKEK K ++RKY
Sbjct: 338 VEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVRGSRVLVKPYKEKPKLIDRKYPY 397
Query: 420 RGEHSVYCSPHYVDLDSELDSMPISTGNHRSIRRQLIEEQEXXXXXXXXXXXXXXXXXXP 479
R EH V SP Y D+D+E+ S P S GN R + R L+EEQ+
Sbjct: 398 RVEHHVCYSPRYADIDAEIASSPRSCGNPRYLTRLLLEEQDRIFELQRRRLALLQIAQKS 457
Query: 480 LSTSPHFGVSIDELRVPDDNFNLQPSESLS 509
LS+ PHFG++++ RV DD+FN+Q +ES S
Sbjct: 458 LSSPPHFGINMNASRVSDDHFNVQATESFS 487
>Medtr3g436060.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr3:12079943-12084739 | 20130731
Length = 701
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 241/487 (49%), Gaps = 85/487 (17%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDL----- 58
T+IVF +IQ +PE+ASKI+G LLLQD+GE++M +LA P+ + V FK + +L
Sbjct: 7 TKIVFSRIQNMDPENASKIMGLLLLQDHGEKEMIRLAFVPESLLHSVIFKARNELGISLN 66
Query: 59 -----QRLAIKSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSP---YWDPLSARNT 110
Q + + P+ + Q S + S LPS N +P+P W LS
Sbjct: 67 SPSTPQSPSPFHSSNPVPISRQNSNSSRLINSGMTLPS--NLSIPNPNSASWATLSELQN 124
Query: 111 --------NTNPEYRAMNYL-DSMIELQKQTQLLSLED-------------HIEPANTGT 148
N++P Y DS+ E Q QL L D P+N G+
Sbjct: 125 HDDSPSMNNSSPFYGNGGVGNDSIDEFHLQDQLSFLNDGKNSDLFYSQSELSSSPSNGGS 184
Query: 149 GGIGIPSDYFGLDASAANVGGKSGRRFSSL-------SEFP-----LKICHYFNKGYCKH 196
G G+ +F S GG RR S+ SE P K C Y+ +GYCK+
Sbjct: 185 VGNGVDPSFF---PSYGYGGGSVHRRSCSVNDAACLVSEDPNSGLGWKPCLYYARGYCKN 241
Query: 197 GTNCRYYHGHVLPENFSQMYGNDTNSEDQVFSQGSLAQLESEIIELLKQKRGHPMS--IA 254
GT+CR+ HG + + ++ ++ Q L S+ L+Q+R S +A
Sbjct: 242 GTSCRFLHGGFGDGGEGVPSMDGSPNKIEMMDQCHEQLLRSKS---LQQQRLAAASQLMA 298
Query: 255 SLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQLNGSIRLISRPHGQHAVVLAE 314
+ P Y + +L L++SQR + + + L++ G RL
Sbjct: 299 TSPFPYSPKSMSLLLQQQQLSDSQRAAAAALIMNEDLQKF-GRSRLE------------- 344
Query: 315 DAPKYIREGDSAQNIS----ASRQIYLTFPADSTFTEEDVSDYFNTFGCVEDVRIPCQQR 370
R S NI ASRQIYLTFPADSTF EEDVS+YF+ +G V+DVRIP QQ+
Sbjct: 345 ------RNDFSLNNIGMMNPASRQIYLTFPADSTFKEEDVSNYFSIYGLVQDVRIPYQQK 398
Query: 371 RMFGFVTFADPETVKMILEKGNPHYVRGSRVLVKPYKEKAKTLE--RKYG--DRGEHSVY 426
RMFGFVTF PETVK+IL KGNPH+V +RVLVKPYKEK K + RK+ +RG+ S
Sbjct: 399 RMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKHQQMERGDFSPC 458
Query: 427 CSPHYVD 433
+P +D
Sbjct: 459 GTPTGLD 465
>Medtr0005s0130.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | scaffold0005:207720-204250 | 20130731
Length = 666
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 221/433 (51%), Gaps = 53/433 (12%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDL----- 58
T++VF +I+ +PE+AS I+G LL +++GE++M +LA P+ I V FK + +L
Sbjct: 7 TKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKELGLPCS 66
Query: 59 -----QRLAIKSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTN 113
+ + P + Q + + S NLP P+ +P+P W + + ++
Sbjct: 67 NNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLP--PSLTIPNPSWGATTTTMSMSD 124
Query: 114 PEYRAMNYLDSMIELQKQTQLLSLEDHIEPANTGTGGIGIPSDYFGLDASAANVGGKSGR 173
+++ + D + + Q Q QL L D +P+ G GG + + + N +G
Sbjct: 125 -QFQNHDDSDPIDDFQLQDQLSFLNDGSDPS-YGWGG----NSSLHRRSCSVNDAYLAGS 178
Query: 174 RFSSLSEFPLKICHYFNKGYCKHGTNCRYYHGHVLPENFSQMYGNDTNSEDQVFSQGSLA 233
S + K C YF +GYCK+GT+CR+ HG + + G+ E+
Sbjct: 179 EDPS-AGLGWKPCLYFARGYCKNGTSCRFLHGDASAAA-AAIVGSPNKIENM-------- 228
Query: 234 QLESEIIELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQ 293
++ ELL+ K H A+ A +++ ++ +L + G N +Q
Sbjct: 229 -MDQYHHELLRSKSSHQQRFAAAAAA-----SQLMASNSFLCSPK-----GMNFLLQQQQ 277
Query: 294 LNGSIRLISRPHGQHAVVLAEDAPKYIREGDSAQNIS----------ASRQIYLTFPADS 343
+ + A+++ E+ K+ R + S ASRQIYLTFPADS
Sbjct: 278 NQNDTQRAAAA----ALMMNEELHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADS 333
Query: 344 TFTEEDVSDYFNTFGCVEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLV 403
TF EEDVS+YF+ FG V+DVRIP QQ+RMFGFVTF PETVK IL KGNPH+V +RVLV
Sbjct: 334 TFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLV 393
Query: 404 KPYKEKAKTLERK 416
KPYKEK K ++K
Sbjct: 394 KPYKEKGKIPDKK 406
>Medtr4g043660.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr4:14609657-14612948 | 20130731
Length = 666
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 221/433 (51%), Gaps = 53/433 (12%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDL----- 58
T++VF +I+ +PE+AS I+G LL +++GE++M +LA P+ I V FK + +L
Sbjct: 7 TKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKELGLPCS 66
Query: 59 -----QRLAIKSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTN 113
+ + P + Q + + S NLP P+ +P+P W + + ++
Sbjct: 67 NNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLP--PSLTIPNPSWGATTTTMSMSD 124
Query: 114 PEYRAMNYLDSMIELQKQTQLLSLEDHIEPANTGTGGIGIPSDYFGLDASAANVGGKSGR 173
+++ + D + + Q Q QL L D +P+ G GG + + + N +G
Sbjct: 125 -QFQNHDDSDPIDDFQLQDQLSFLNDGSDPS-YGWGG----NSSLHRRSCSVNDAYLAGS 178
Query: 174 RFSSLSEFPLKICHYFNKGYCKHGTNCRYYHGHVLPENFSQMYGNDTNSEDQVFSQGSLA 233
S + K C YF +GYCK+GT+CR+ HG + + G+ E+
Sbjct: 179 EDPS-AGLGWKPCLYFARGYCKNGTSCRFLHGDASAAA-AAIVGSPNKIENM-------- 228
Query: 234 QLESEIIELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQ 293
++ ELL+ K H A+ A +++ ++ +L + G N +Q
Sbjct: 229 -MDQYHHELLRSKSSHQQRFAAAAAA-----SQLMASNSFLCSPK-----GMNFLLQQQQ 277
Query: 294 LNGSIRLISRPHGQHAVVLAEDAPKYIREGDSAQNIS----------ASRQIYLTFPADS 343
+ + A+++ E+ K+ R + S ASRQIYLTFPADS
Sbjct: 278 NQNDTQRAAAA----ALMMNEELHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADS 333
Query: 344 TFTEEDVSDYFNTFGCVEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLV 403
TF EEDVS+YF+ FG V+DVRIP QQ+RMFGFVTF PETVK IL KGNPH+V +RVLV
Sbjct: 334 TFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLV 393
Query: 404 KPYKEKAKTLERK 416
KPYKEK K ++K
Sbjct: 394 KPYKEKGKIPDKK 406
>Medtr4g043660.2 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr4:14609657-14612948 | 20130731
Length = 666
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 221/433 (51%), Gaps = 53/433 (12%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDL----- 58
T++VF +I+ +PE+AS I+G LL +++GE++M +LA P+ I V FK + +L
Sbjct: 7 TKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKELGLPCS 66
Query: 59 -----QRLAIKSAVIPILPNPQQGLSHLAVISPRNLPSPPNFQVPSPYWDPLSARNTNTN 113
+ + P + Q + + S NLP P+ +P+P W + + ++
Sbjct: 67 NNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLP--PSLTIPNPSWGATTTTMSMSD 124
Query: 114 PEYRAMNYLDSMIELQKQTQLLSLEDHIEPANTGTGGIGIPSDYFGLDASAANVGGKSGR 173
+++ + D + + Q Q QL L D +P+ G GG + + + N +G
Sbjct: 125 -QFQNHDDSDPIDDFQLQDQLSFLNDGSDPS-YGWGG----NSSLHRRSCSVNDAYLAGS 178
Query: 174 RFSSLSEFPLKICHYFNKGYCKHGTNCRYYHGHVLPENFSQMYGNDTNSEDQVFSQGSLA 233
S + K C YF +GYCK+GT+CR+ HG + + G+ E+
Sbjct: 179 EDPS-AGLGWKPCLYFARGYCKNGTSCRFLHGDASAAA-AAIVGSPNKIENM-------- 228
Query: 234 QLESEIIELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYNLTKLLEQ 293
++ ELL+ K H A+ A +++ ++ +L + G N +Q
Sbjct: 229 -MDQYHHELLRSKSSHQQRFAAAAAA-----SQLMASNSFLCSPK-----GMNFLLQQQQ 277
Query: 294 LNGSIRLISRPHGQHAVVLAEDAPKYIREGDSAQNIS----------ASRQIYLTFPADS 343
+ + A+++ E+ K+ R + S ASRQIYLTFPADS
Sbjct: 278 NQNDTQRAAAA----ALMMNEELHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADS 333
Query: 344 TFTEEDVSDYFNTFGCVEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLV 403
TF EEDVS+YF+ FG V+DVRIP QQ+RMFGFVTF PETVK IL KGNPH+V +RVLV
Sbjct: 334 TFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLV 393
Query: 404 KPYKEKAKTLERK 416
KPYKEK K ++K
Sbjct: 394 KPYKEKGKIPDKK 406
>Medtr5g008900.1 | zinc finger CCCH domain protein | HC |
chr5:1988974-1993972 | 20130731
Length = 685
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 157/300 (52%), Gaps = 51/300 (17%)
Query: 181 FPLKICHYFNKGYCKHGTNCRYYHGHVLPENFSQMYGN---DTNSEDQVFSQGSLAQLES 237
F K C YF +G+CK+G+NC++ HG + N + G+ + + + F + AQ
Sbjct: 235 FGFKPCLYFARGFCKNGSNCKFVHGDSIDANSGAVVGSPKFEGLEQHEEFMRFKAAQQHQ 294
Query: 238 EIIELLKQKRGHPMSIASLPMAYYDRYKKVLQADGYLTESQRH--------GKSGYNLTK 289
++ + G ++ YD+Y +L +++QR G+ +N+T
Sbjct: 295 RMVAASQLAAGGTSPVS------YDKYIDLLMQQH--SDNQRAVAAAAFAMGEEYFNITG 346
Query: 290 LLEQLNGSIRLISRPH-GQHAVVLAEDAPKYIREGDSAQNISASRQIYLTFPADSTFTEE 348
RP + +++ D P SASRQIYLTFPA+STF +E
Sbjct: 347 R-----------GRPERNEFLAMVSGDKPN-----------SASRQIYLTFPAESTFKDE 384
Query: 349 DVSDYFNTFGCVEDVRIPCQQRRMFGFVTFADPETVKMILEKGNPHYVRGSRVLVKPYKE 408
DVS+YF+ FG V+DVRIP QQ+RMFGFVTF PETV++IL KGNPH++ SRVLVKPYKE
Sbjct: 385 DVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKE 444
Query: 409 KAKTLERKYG------DRGEHSVYCSPHYVDLDSELDSMPIST---GNHRSIRRQLIEEQ 459
K K ++++ +RG+ S SP D D P + H + R+ IEEQ
Sbjct: 445 KGKVPDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQ 504
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 4 TRIVFDKIQKFEPEHASKIIGYLLLQDNGEQKMAKLASCPDQFIGEVAFKVKTDL-QRLA 62
T +V K++ F+PE+ASKI+G+LL+ E ++ +LA CPD + +A +VKT L L+
Sbjct: 7 TNVVLAKVKNFDPENASKIMGFLLMNLE-EYELVRLACCPDHVLHNLAIRVKTHLGMNLS 65
Query: 63 IKSAVIPILP 72
S+ P+ P
Sbjct: 66 TPSSPSPLNP 75