Miyakogusa Predicted Gene
- Lj2g3v3247910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3247910.1 tr|G7K677|G7K677_MEDTR mTERF family protein
OS=Medicago truncatula GN=MTR_5g068860 PE=4 SV=1,25.98,9e-19,SUBFAMILY
NOT NAMED,NULL; CGI-12 PROTEIN-RELATED,NULL; seg,NULL;
mTERF,Mitochodrial transcription te,CUFF.39927.1
(353 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g094610.1 | transcription termination factor family protei... 549 e-156
Medtr2g067230.1 | transcription termination factor family protei... 98 1e-20
Medtr6g003960.1 | transcription termination factor family protei... 89 7e-18
Medtr2g034600.3 | transcription termination factor family protei... 89 8e-18
Medtr2g034600.1 | transcription termination factor family protei... 88 1e-17
Medtr2g034600.2 | transcription termination factor family protei... 88 1e-17
Medtr4g070060.1 | transcription termination factor family protei... 88 1e-17
Medtr4g084630.1 | transcription termination factor family protei... 87 2e-17
Medtr5g068860.1 | transcription termination factor family protei... 87 2e-17
Medtr5g041630.1 | transcription termination factor family protei... 87 3e-17
Medtr1g115415.1 | transcription termination factor family protei... 77 2e-14
Medtr7g081270.1 | transcription termination factor family protei... 77 2e-14
Medtr2g049780.1 | transcription termination factor family protei... 73 4e-13
Medtr8g105560.1 | transcription termination factor family protei... 71 2e-12
Medtr3g092710.1 | plastid transcriptionally active 15 protein | ... 55 8e-08
>Medtr5g094610.1 | transcription termination factor family protein |
HC | chr5:41344877-41348219 | 20130731
Length = 503
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/336 (79%), Positives = 293/336 (87%), Gaps = 1/336 (0%)
Query: 19 QFGRNSKEKKYPRLSEEIVMDVKWLPLLDYLSTFEIKESHFLQMYERHMPSLQINVCSAQ 78
+F RNS EKKYP LSEEI++D KWLPLLDYLSTF IKES F+Q+YERHM S QINVCSAQ
Sbjct: 168 KFRRNSMEKKYPELSEEILLDEKWLPLLDYLSTFGIKESQFIQIYERHMSSFQINVCSAQ 227
Query: 79 ERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAP 138
ER+DYLMS+GVK++D+R+ LLRQPQILEYT+ENNLK HV FL GLG+P+++IGQIIA+ P
Sbjct: 228 ERIDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIASTP 287
Query: 139 SLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELG 198
SLFSYSV+ SLKPT RYL+EEVGI EKDLGKVIQLSPQILVQRIDISWNTR MFL+KEL
Sbjct: 288 SLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRLMFLNKELD 347
Query: 199 APRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXEDN 258
AP++S+VKMV KHPQLLHYSIDDGLLPRINFLRSIGMKN DI E N
Sbjct: 348 APKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSLEAN 407
Query: 259 LKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPLGYLVPT 318
LKPKYLYLVNEL NEV++LTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPLG LVPT
Sbjct: 408 LKPKYLYLVNELHNEVQTLTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPLGSLVPT 467
Query: 319 DESFCQRW-DTSLDTYLAFRQRLLLKKFAEKYERKM 353
DESFCQRW T+LD Y AFRQRLLLKK AEKY+RKM
Sbjct: 468 DESFCQRWAGTTLDEYAAFRQRLLLKKLAEKYDRKM 503
>Medtr2g067230.1 | transcription termination factor family protein |
HC | chr2:28121064-28123893 | 20130731
Length = 328
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 121/243 (49%), Gaps = 16/243 (6%)
Query: 78 QERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAA 137
Q+++ YL S+G+ D + P+++ ++++ +K+ V ++ G+ + +++
Sbjct: 70 QKKVLYLESIGI---DSFSLIENHPKLVTASLDD-IKSTVKYITGMDFSSIEFRRLVGMC 125
Query: 138 PSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKEL 197
P + + V + + P +L EV + ++ VI P++++ +D FL + +
Sbjct: 126 PEILTTKVSDII-PVFTFLHREVRVIGSNIKHVINRRPRLIICNVDKQLRPTMYFL-QSI 183
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXED 257
G ++ V KH LL S++D +PRI + ++IG D ++
Sbjct: 184 G------IEEVNKHTHLLSCSVEDKFIPRIEYFKNIGFSRRDTTSMFRRFPQLFCYSIKN 237
Query: 258 NLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPLGYLVP 317
NL+PKY Y V E+ ++K + ++P Y S SL+ RI+PRHK V + FPL L+
Sbjct: 238 NLEPKYNYFVVEMGRDLKEVKEFPHYFSFSLENRIKPRHKRCVEMGVC----FPLPLLLK 293
Query: 318 TDE 320
T E
Sbjct: 294 TSE 296
>Medtr6g003960.1 | transcription termination factor family protein |
HC | chr6:35948-29152 | 20130731
Length = 609
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Query: 78 QERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAA 137
+E L +L SV V + + RQPQ+L + + LK VD LG+ ++ Q+I +
Sbjct: 350 KEVLAFLHSVKVPKTWTDRAIKRQPQLLGCS-TSKLKLMVDQFAELGVQRKKLYQVITRS 408
Query: 138 PSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKEL 197
P L ++ L+ + E +G +++++G+++ P+I I + ++ FLS+ +
Sbjct: 409 PQLLLQKPEDFLQVVMFF--ENMGFDKENIGRILARCPEIFATSISKTLQSKIEFLSR-I 465
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXED 257
+ + +++K+P+LL I+ L RI + +G+ +I ++
Sbjct: 466 EVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKVGLSEKEIALMVRKFSPLLGYSIKE 525
Query: 258 NLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFL 299
L PK +LVN ++ V+ + +YP Y S SL+++I+PR++ L
Sbjct: 526 VLMPKLEFLVNSMKRPVRDVVRYPRYFSYSLEKKIKPRYRVL 567
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 7/266 (2%)
Query: 44 PLLDYLSTFEIKESHFLQMYERHMPSLQINVCSAQERLDYLMSVGVKNRDVRKTLLRQPQ 103
P LD L I + P L NV Q R+ L + ++D K +L+ P
Sbjct: 280 PTLDILQNIGIPADRIPNIILAFPPILLWNVELLQTRVLALNQIDGVDKDYAKLMLKYPW 339
Query: 104 ILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGIN 163
+L +I+ N K + FL + +P + + I P L S + LK E +G+
Sbjct: 340 VLSTSIQENYKEVLAFLHSVKVPKTWTDRAIKRQPQLLGCST-SKLKLMVDQFAE-LGVQ 397
Query: 164 EKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGL 223
K L +VI SPQ+L+Q+ + F + +G ++++ +++ + P++ SI L
Sbjct: 398 RKKLYQVITRSPQLLLQKPEDFLQVVMFF--ENMGFDKENIGRILARCPEIFATSISKTL 455
Query: 224 LPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYL--VNELRNEVKSLT-KY 280
+I FL I + I L + +Y V E+ + K+
Sbjct: 456 QSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKVGLSEKEIALMVRKF 515
Query: 281 PMYLSLSLDQRIRPRHKFLVSLKKAP 306
L S+ + + P+ +FLV+ K P
Sbjct: 516 SPLLGYSIKEVLMPKLEFLVNSMKRP 541
>Medtr2g034600.3 | transcription termination factor family protein |
HC | chr2:13233799-13236843 | 20130731
Length = 496
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 47/254 (18%)
Query: 81 LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSL 140
+ YLM +G+ VR + R P Y++E +K V+F LG+P +I I+ P L
Sbjct: 215 IAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQL 274
Query: 141 FSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQIL---VQRIDISWNTRYMFLSKEL 197
S+ +LKPT ++ E +G++++ KVI P +L Q+I+ S + FL +E
Sbjct: 275 CGISLSKNLKPTMKFF-ESLGVDKEQWAKVIYRFPALLTYSTQKINESLD----FL-REF 328
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXED 257
G +++ K++ + P ++ YS++D L P + RS+G+ D+ E
Sbjct: 329 GVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEA 385
Query: 258 NLKP------KYLYLVNELRNEVK-----------------------------SLTKYPM 282
N+KP + Y + E+ +K L K+P
Sbjct: 386 NIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQ 445
Query: 283 YLSLSLDQRIRPRH 296
+ SL+QRI+PR+
Sbjct: 446 FFGYSLEQRIKPRY 459
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 44 PLLDYLSTFEIKESHFLQMYERHMPSLQINVCSAQERLDYLMSVGVKNRDVRKTLLRQPQ 103
P + + + + + + ++ R L + E LD+L GV ++ K L R P
Sbjct: 285 PTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPT 344
Query: 104 ILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTAR------YLV 157
I+ Y++E+NL+ + R LG+ +G ++ P F S++ ++KP + Y +
Sbjct: 345 IVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTM 401
Query: 158 EEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 217
EE+GI K G + S L + + W+ FL+ + P+ +VK PQ Y
Sbjct: 402 EEIGIMIKRYGMLYTFS---LTENLMPKWD---YFLT--MDYPKSELVKF----PQFFGY 449
Query: 218 SIDDGLLPRINFLRSIGMK 236
S++ + PR ++ G++
Sbjct: 450 SLEQRIKPRYTRVKISGVR 468
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 110 ENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGK 169
E NL+ H+ +L LG+ ++ I+ P+ YS++ +KP + + E+G+ ++ +
Sbjct: 208 EGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFL-ELGVPKEKIII 266
Query: 170 VIQLSPQILVQRIDISWNTR-YMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRIN 228
++ PQ+ I +S N + M + LG ++ K++ + P LL YS + ++
Sbjct: 267 ILTKRPQLC--GISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK-INESLD 323
Query: 229 FLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSL 288
FLR G+ +I EDNL+P +Y + + L P LS+
Sbjct: 324 FLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGVDVGLLLFNCPQNFGLSI 383
Query: 289 DQRIRPRHKFLV 300
+ I+P +F +
Sbjct: 384 EANIKPVTQFFL 395
>Medtr2g034600.1 | transcription termination factor family protein |
HC | chr2:13233091-13236843 | 20130731
Length = 557
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 47/254 (18%)
Query: 81 LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSL 140
+ YLM +G+ VR + R P Y++E +K V+F LG+P +I I+ P L
Sbjct: 276 IAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQL 335
Query: 141 FSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQIL---VQRIDISWNTRYMFLSKEL 197
S+ +LKPT ++ E +G++++ KVI P +L Q+I+ S + FL +E
Sbjct: 336 CGISLSKNLKPTMKFF-ESLGVDKEQWAKVIYRFPALLTYSTQKINESLD----FL-REF 389
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXED 257
G +++ K++ + P ++ YS++D L P + RS+G+ D+ E
Sbjct: 390 GVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEA 446
Query: 258 NLKP------KYLYLVNELRNEVK-----------------------------SLTKYPM 282
N+KP + Y + E+ +K L K+P
Sbjct: 447 NIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQ 506
Query: 283 YLSLSLDQRIRPRH 296
+ SL+QRI+PR+
Sbjct: 507 FFGYSLEQRIKPRY 520
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 44 PLLDYLSTFEIKESHFLQMYERHMPSLQINVCSAQERLDYLMSVGVKNRDVRKTLLRQPQ 103
P + + + + + + ++ R L + E LD+L GV ++ K L R P
Sbjct: 346 PTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPT 405
Query: 104 ILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTAR------YLV 157
I+ Y++E+NL+ + R LG+ +G ++ P F S++ ++KP + Y +
Sbjct: 406 IVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTM 462
Query: 158 EEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 217
EE+GI K G + S L + + W+ FL+ + P+ +VK PQ Y
Sbjct: 463 EEIGIMIKRYGMLYTFS---LTENLMPKWD---YFLT--MDYPKSELVKF----PQFFGY 510
Query: 218 SIDDGLLPRINFLRSIGMK 236
S++ + PR ++ G++
Sbjct: 511 SLEQRIKPRYTRVKISGVR 529
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 110 ENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGK 169
E NL+ H+ +L LG+ ++ I+ P+ YS++ +KP + + E+G+ ++ +
Sbjct: 269 EGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFL-ELGVPKEKIII 327
Query: 170 VIQLSPQILVQRIDISWNTR-YMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRIN 228
++ PQ+ I +S N + M + LG ++ K++ + P LL YS + ++
Sbjct: 328 ILTKRPQLC--GISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK-INESLD 384
Query: 229 FLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSL 288
FLR G+ +I EDNL+P +Y + + L P LS+
Sbjct: 385 FLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGVDVGLLLFNCPQNFGLSI 444
Query: 289 DQRIRPRHKFLV 300
+ I+P +F +
Sbjct: 445 EANIKPVTQFFL 456
>Medtr2g034600.2 | transcription termination factor family protein |
HC | chr2:13233091-13236856 | 20130731
Length = 561
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 47/254 (18%)
Query: 81 LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSL 140
+ YLM +G+ VR + R P Y++E +K V+F LG+P +I I+ P L
Sbjct: 280 IAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQL 339
Query: 141 FSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQIL---VQRIDISWNTRYMFLSKEL 197
S+ +LKPT ++ E +G++++ KVI P +L Q+I+ S + FL +E
Sbjct: 340 CGISLSKNLKPTMKFF-ESLGVDKEQWAKVIYRFPALLTYSTQKINESLD----FL-REF 393
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXED 257
G +++ K++ + P ++ YS++D L P + RS+G+ D+ E
Sbjct: 394 GVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEA 450
Query: 258 NLKP------KYLYLVNELRNEVK-----------------------------SLTKYPM 282
N+KP + Y + E+ +K L K+P
Sbjct: 451 NIKPVTQFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQ 510
Query: 283 YLSLSLDQRIRPRH 296
+ SL+QRI+PR+
Sbjct: 511 FFGYSLEQRIKPRY 524
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 44 PLLDYLSTFEIKESHFLQMYERHMPSLQINVCSAQERLDYLMSVGVKNRDVRKTLLRQPQ 103
P + + + + + + ++ R L + E LD+L GV ++ K L R P
Sbjct: 350 PTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPT 409
Query: 104 ILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTAR------YLV 157
I+ Y++E+NL+ + R LG+ +G ++ P F S++ ++KP + Y +
Sbjct: 410 IVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTM 466
Query: 158 EEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 217
EE+GI K G + S L + + W+ FL+ + P+ +VK PQ Y
Sbjct: 467 EEIGIMIKRYGMLYTFS---LTENLMPKWD---YFLT--MDYPKSELVKF----PQFFGY 514
Query: 218 SIDDGLLPRINFLRSIGMK 236
S++ + PR ++ G++
Sbjct: 515 SLEQRIKPRYTRVKISGVR 533
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 110 ENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGK 169
E NL+ H+ +L LG+ ++ I+ P+ YS++ +KP + + E+G+ ++ +
Sbjct: 273 EGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFL-ELGVPKEKIII 331
Query: 170 VIQLSPQILVQRIDISWNTR-YMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRIN 228
++ PQ+ I +S N + M + LG ++ K++ + P LL YS + ++
Sbjct: 332 ILTKRPQLC--GISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQK-INESLD 388
Query: 229 FLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSL 288
FLR G+ +I EDNL+P +Y + + L P LS+
Sbjct: 389 FLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYFRSLGVDVGLLLFNCPQNFGLSI 448
Query: 289 DQRIRPRHKFLV 300
+ I+P +F +
Sbjct: 449 EANIKPVTQFFL 460
>Medtr4g070060.1 | transcription termination factor family protein |
HC | chr4:26370303-26365871 | 20130731
Length = 617
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 46/236 (19%)
Query: 71 QINVCSAQER----LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIP 126
Q+ CS +E+ + YL G+ +R+ L +P + +E + V F + LG+
Sbjct: 371 QLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVR 430
Query: 127 NSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRI--DI 184
N I +++ P+L +YS+ ++P +L+ + G+ E+++ KVI L P++L I +
Sbjct: 431 NDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVIALGPELLGCSIVHKL 490
Query: 185 SWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXX 244
N +Y +LS LG + +M+ P LL Y+ID
Sbjct: 491 EGNVKY-YLS--LGIRLQQLGEMIADFPMLLRYNID------------------------ 523
Query: 245 XXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFLV 300
L+PKY YL + +K ++P + S SL+ RI PRHK LV
Sbjct: 524 -------------VLRPKYTYLRKTMVRTLKDAIEFPRFFSYSLEGRIIPRHKVLV 566
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 21/277 (7%)
Query: 76 SAQERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIA 135
S + R+++L SV VK + +L+ + + L VD+L G+ +G +++
Sbjct: 237 SIRNRVEWLKSVLVKGEFIGDAMLKSGDNVLLRSDGELDEIVDYLEFNGVRREWMGYVVS 296
Query: 136 AAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSK 195
P L SYS++ YL ++G++ KD G ++ P+ L N + +L K
Sbjct: 297 RCPKLLSYSLEEVKTRVQFYL--DMGLDAKDFGTMVFDFPKALGHYTLEEMNRKVDYL-K 353
Query: 196 ELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXX 255
E G V K++ PQL+ SI++ P + +L G+ +
Sbjct: 354 EFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDL 413
Query: 256 EDNLKPKYLYLVN-ELRNE--VKSLTKYPMYLSLSLDQRIRPRHKFL-----VSLKKAPK 307
E + PK + + +RN+ K L K+P L+ SL ++IRP FL V+ + PK
Sbjct: 414 EMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPK 473
Query: 308 ----GPFPLGYLVPTDESFCQRWDTSLDTYLAFRQRL 340
GP LG S + + ++ YL+ RL
Sbjct: 474 VIALGPELLGC------SIVHKLEGNVKYYLSLGIRL 504
>Medtr4g084630.1 | transcription termination factor family protein |
HC | chr4:32962573-32960937 | 20130731
Length = 332
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 20/263 (7%)
Query: 47 DYLSTFEIKESHFLQMYERHMPSL-----QINVCSAQERL----DYLMSVGVKNRDVRKT 97
DYL T I+E R +PS+ +I V E++ + L ++ K +V
Sbjct: 46 DYLKTIGIQE--------RKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASA 97
Query: 98 LLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLV 157
+ + PQIL ++E L + F + LG+P IG+I+ P L SYS++ + ++L
Sbjct: 98 IAKFPQILSCSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLA 157
Query: 158 EEVGINEKDL-GKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLH 216
VG+++ + GK++ P I+ +D FL K +G + + P +L
Sbjct: 158 S-VGLDKNGMIGKIMVKDPYIMGYSVDKRLRPTSEFL-KSIGLTEHDLQVLALNFPSILS 215
Query: 217 YSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKS 276
+D L+ +FL++ G + I ++L+P+ +LV+ + EV
Sbjct: 216 RDVDKVLVHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDVMGREVDE 275
Query: 277 LTKYPMYLSLSLDQRIRPRHKFL 299
+ YP + L +++ RHK L
Sbjct: 276 IIDYPCFFRHGLKKKLVSRHKLL 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 6/230 (2%)
Query: 77 AQERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAA 136
A E DYL ++G++ R + + + P+IL + + V+ L L + IA
Sbjct: 41 ADENWDYLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAK 100
Query: 137 APSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKE 196
P + S SV+ L P + + +G+ EK +GK++ L+P+++ I+ FL+
Sbjct: 101 FPQILSCSVEEKLCPLLAFF-QTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLA-S 158
Query: 197 LGAPRDSVV-KMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXX 255
+G ++ ++ K++ K P ++ YS+D L P FL+SIG+ D+
Sbjct: 159 VGLDKNGMIGKIMVKDPYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILSRDV 218
Query: 256 EDNLKPKYLYLVN---ELRNEVKSLTKYPMYLSLSLDQRIRPRHKFLVSL 302
+ L Y +L N + R V + YP L S+ + PR KFLV +
Sbjct: 219 DKVLVHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDV 268
>Medtr5g068860.1 | transcription termination factor family protein |
HC | chr5:29165945-29163659 | 20130731
Length = 530
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 48 YLSTFEIKESHFLQMYERHMPSLQINV-CSAQERLDYLMSVGVKNRDVRKTLLRQPQILE 106
YL +IK ++ ER+ L + + + YL+ +GV R++ L R P+IL
Sbjct: 213 YLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILG 272
Query: 107 YTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKD 166
+ +K V++L LGIP I ++I P + + +D +KP + L EE + E
Sbjct: 273 MRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSL-EEFNVRETS 331
Query: 167 LGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPR 226
L +I P I+ ++ + L+ L + +++K PQ++ S +L
Sbjct: 332 LASIIAQYPDIIGTDLEPKLADKRSVLNSVLDLDAEDFGLIIEKMPQVVSLS-STPMLKH 390
Query: 227 INFLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSL 286
++FL+ G + D D +K + Y +E+ ++ L ++P + +
Sbjct: 391 VDFLKDCGF-SVDQMRKMIVGCPQLLALNIDIMKLSFDYFQSEMERPLEDLVEFPAFFTY 449
Query: 287 SLDQRIRPRHKFLVSLKKAPKGPFPLGYLVPTDESFCQRWD 327
L+ I+PRH + KK K L +DE F QR D
Sbjct: 450 GLESTIKPRHNMVT--KKGLKCSLAW-MLNCSDEKFEQRMD 487
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 75 CSAQER----LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRI 130
CS ++ LDYL +GV+ + + L PQ+L ++ +L V +L+G+ I I
Sbjct: 165 CSVKKNMVPVLDYLGKLGVRKSTITQFLRTYPQVLHASVVVDLVPVVKYLQGMDIKPDDI 224
Query: 131 GQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRY 190
+++ P + + ++ ++ + YL+ +G+ ++LG ++ P+IL R+
Sbjct: 225 PRVLERYPEVLGFKLEGTMSTSVAYLI-GIGVGRRELGGILTRFPEILGMRVGRVIKPFV 283
Query: 191 MFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMK 236
+L + LG PR ++ ++++ P +L + +D+ + P + L ++
Sbjct: 284 EYL-ESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNVR 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 70 LQINVCSAQERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSR 129
L + V +ER+D+L S+G+ D+ P +L +++ N+ +D+L LG+ S
Sbjct: 132 LPVTVDVMKERVDFLHSLGLTIEDINN----YPLVLGCSVKKNMVPVLDYLGKLGVRKST 187
Query: 130 IGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTR 189
I Q + P + SV L P +YL + + I D+ +V++ P++L +++ + +T
Sbjct: 188 ITQFLRTYPQVLHASVVVDLVPVVKYL-QGMDIKPDDIPRVLERYPEVLGFKLEGTMSTS 246
Query: 190 YMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGM 235
+L +G R + ++ + P++L + + P + +L S+G+
Sbjct: 247 VAYLIG-IGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGI 291
>Medtr5g041630.1 | transcription termination factor family protein |
HC | chr5:18278077-18276642 | 20130731
Length = 308
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 112 NLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVI 171
LK+ L +GI S++G+I+ P L + + + P +L+ EV I D+ K I
Sbjct: 88 TLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKSI 147
Query: 172 QLSPQILVQRIDISWNTRYMFLSKELG--APRDSVVKMVKKHPQLLHYSIDDGLLPRINF 229
P++LV ++ FL +ELG P + LL S++D LLP++ F
Sbjct: 148 LRCPRLLVSSVENRLRPALCFL-RELGFVGPHSLTCQTT----LLLVSSVEDTLLPKVEF 202
Query: 230 LRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSLD 289
L +G ++ + NL PK+ + + E+ +V L ++P Y S SL+
Sbjct: 203 LMGLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKFEFFLKEMNGDVAELKRFPQYFSFSLE 262
Query: 290 QRIRPRHKFLVSL 302
RI+PRH LV L
Sbjct: 263 GRIKPRHAMLVRL 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 81 LDYLMS-VGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGI--PNSRIGQIIAAA 137
LD+L++ V + DV K++LR P++L ++EN L+ + FLR LG P+S Q
Sbjct: 129 LDFLLNEVEIPYHDVHKSILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTL-- 186
Query: 138 PSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKEL 197
L SV+++L P +L+ +G ++ ++ SP +L +D + ++ F KE+
Sbjct: 187 --LLVSSVEDTLLPKVEFLM-GLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKFEFFLKEM 243
Query: 198 GAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGM 235
+ V +K+ PQ +S++ + PR L +G+
Sbjct: 244 ----NGDVAELKRFPQYFSFSLEGRIKPRHAMLVRLGL 277
>Medtr1g115415.1 | transcription termination factor family protein |
HC | chr1:52109146-52107512 | 20130731
Length = 501
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 132/276 (47%), Gaps = 9/276 (3%)
Query: 27 KKYPRLSEEIVMDVKWLPLLDYLSTFEIKESHFLQMYERHMPSLQINV-CSAQERLDYLM 85
K YP++ V+ V+ P++ +L ++++ + +++ L + + + YL+
Sbjct: 161 KNYPQVLHASVI-VELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLV 219
Query: 86 SVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFSYSV 145
S+GV RD+ + + P L + +K VD+L LG+P + +++ L Y +
Sbjct: 220 SIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARMLEKRAYLLGYDL 279
Query: 146 DNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVV 205
+ ++KP L+ G+ ++ L VI P I+ + +++ F S +L +
Sbjct: 280 EETVKPNVDCLI-SFGLRKEYLPSVIAQYPLIIGLPLKAKLSSQQYFFSLKLKIDPEGFA 338
Query: 206 KMVKKHPQL--LHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKPKY 263
++V+K PQ+ LH ++ ++ + FL + + D+ E +K Y
Sbjct: 339 RVVEKMPQVVSLHQNV---IMKPVEFLLGRAIPSQDVASMVIKCPQLVALRVEL-MKNSY 394
Query: 264 LYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFL 299
+ +E+ VK L ++P Y + SL+ RI+PR++ L
Sbjct: 395 YFFKSEMGRPVKELVEFPEYFTYSLESRIKPRYQRL 430
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 75 CSAQER----LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRI 130
CS ++ L YL +G+ + + + PQ+L ++ L + FLRGL + I
Sbjct: 133 CSVRKNMIPVLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDI 192
Query: 131 GQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRY 190
G ++ P L + ++ ++ + YLV +G+N +D+G ++ P L R+
Sbjct: 193 GFVLQKYPELLGFKLEGTMSTSVAYLV-SIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLV 251
Query: 191 MFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMK 236
+L LG P+ + +M++K LL Y +++ + P ++ L S G++
Sbjct: 252 DYLVN-LGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLR 296
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 44 PLLDYLSTFEIKESHFLQMYERHMPSLQINVC-SAQERLDYLMSVGVKNRDVRKTLLRQP 102
PL+DYL + + +M E+ L ++ + + +D L+S G++ + + + P
Sbjct: 249 PLVDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYP 308
Query: 103 QILEYTIENNLKAHVDFLR-GLGIPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVG 161
I+ ++ L + F L I +++ P + S + +KP L
Sbjct: 309 LIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGR--A 366
Query: 162 INEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDD 221
I +D+ ++ PQ++ R+++ N+ Y F S E+G P VK + + P+ YS++
Sbjct: 367 IPSQDVASMVIKCPQLVALRVELMKNSYYFFKS-EMGRP----VKELVEFPEYFTYSLES 421
Query: 222 GLLPRINFLRSIGMK 236
+ PR L++ G+K
Sbjct: 422 RIKPRYQRLKTKGIK 436
>Medtr7g081270.1 | transcription termination factor family protein |
HC | chr7:31009132-31008262 | 20130731
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 15/255 (5%)
Query: 75 CSAQERLDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQII 134
+ E L YL ++ + N + + L P + N++ + FL+ + I +++
Sbjct: 41 TTYNENLHYLKALTIINPNTKPNNLPHPDTI-----NHILTIITFLKSHSFTEADIPRLV 95
Query: 135 AAAPSLFSYSVD-NSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFL 193
+P LF+ S+ SL P +L ++ + +D +I P +L ++ FL
Sbjct: 96 HHSPHLFTTSISPTSLSPVFTFLASDLLASVEDSHGLILRCPNLLFTDVNHILKPTLHFL 155
Query: 194 SKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSI-GMKNPDIXXXXXXXXXXXX 252
+E+G ++ + ++ LL+ ++ + R+ FL + G +
Sbjct: 156 REEVGV--SNLNRPTNRNAHLLNTRVEKMRM-RVRFLEEVVGFTYEEARNVCARLPAILG 212
Query: 253 XXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPL 312
E+NL PK++YLV E+ EV+ L K+P + SLD+RI PRH L K PL
Sbjct: 213 YDVENNLWPKFVYLVKEMEREVEELKKFPQFFGFSLDKRIVPRHLHL----KERGVRIPL 268
Query: 313 G-YLVPTDESFCQRW 326
L+ DE F +W
Sbjct: 269 NRMLMWGDEKFYAKW 283
>Medtr2g049780.1 | transcription termination factor family protein |
HC | chr2:22364848-22363786 | 20130731
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 82 DYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLF 141
+ ++ + V D K L + P + T+E+ + + + FL GI + + +I P +
Sbjct: 71 EKILCLEVMGIDSGKALSQNPNLHTATLES-IHSIITFLVSKGIQHKDLPRIFGMCPKIL 129
Query: 142 SYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPR 201
+ S+ L P +L+ ++ + + KVI+ P++L + +L++ LG R
Sbjct: 130 TSSIKTDLNPVFDFLIHDLKVPDHSFRKVIKKCPRLLTSSVVDQLKPALFYLNR-LGL-R 187
Query: 202 DSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXXXXXXEDNLKP 261
D + + + LL +++ ++P++ L S+G + E+N +P
Sbjct: 188 D-LEALAYQDCVLLVSNVERTIIPKLKHLESLGFTKEEARCMVLRCPALLTFSIENNFQP 246
Query: 262 KYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRH 296
K+ Y E++ +++ L ++P Y S SL+ RI+ RH
Sbjct: 247 KFEYFSVEMKGKLEELKEFPQYFSFSLENRIKVRH 281
>Medtr8g105560.1 | transcription termination factor family protein |
HC | chr8:44520352-44517998 | 20130731
Length = 560
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 113/232 (48%), Gaps = 16/232 (6%)
Query: 13 ILFFQLQFGRNSKEKKY--PRLSEEIVMD-----VKWLPLLDYLSTFEIKESHFLQMYER 65
+LFF L ++SK +Y P ++ ++ V + + DYL I ++ +
Sbjct: 20 VLFFNLYGTQDSKFPEYEMPTVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPD---ELQDL 76
Query: 66 HMPSLQINVCSAQERLDYLMSVGVKNRDVRK-TLLRQPQILEYTIENNLKAHVDFLRGLG 124
+PS V +ER++++ +G+ D+ + L+ +L ++ L + FLRGL
Sbjct: 77 ELPS---TVEVMRERVEFIQKLGLTIDDINQYPLILGCSVLHASVIVELAPVIKFLRGLD 133
Query: 125 IPNSRIGQIIAAAPSLFSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDI 184
+ IG ++ P L + ++ ++ + YLV +G+N +D+G ++ P L R+
Sbjct: 134 VEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLV-SIGVNPRDIGPMVAQYPYFLGMRVGT 192
Query: 185 SWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMK 236
+L LG P+ + +M++K LL Y +++ + P ++ L S G++
Sbjct: 193 MIKPFVDYLVN-LGLPKKILARMLEKRAYLLGYVLEETMKPNVDCLISFGLR 243
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 83 YLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSLFS 142
YL+S+GV RD+ + + P L + +K VD+L LG+P + +++ L
Sbjct: 164 YLVSIGVNPRDIGPMVAQYPYFLGMRVGTMIKPFVDYLVNLGLPKKILARMLEKRAYLLG 223
Query: 143 YSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPRD 202
Y ++ ++KP L+ G+ ++ L VI PQI+ + + + F S +L +
Sbjct: 224 YVLEETMKPNVDCLI-SFGLRKECLPSVIAQYPQIIGLPLTAKLSLQQYFYSLKLKIDSE 282
Query: 203 SVVKMVKKHPQLL 215
K+V+K PQ++
Sbjct: 283 GFAKVVEKMPQVV 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 81 LDYLMSVGVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLGIPNSRIGQIIAAAPSL 140
+DYL+++G+ + + + L ++ +L Y +E +K +VD L G+ + +IA P +
Sbjct: 198 VDYLVNLGLPKKILARMLEKRAYLLGYVLEETMKPNVDCLISFGLRKECLPSVIAQYPQI 257
Query: 141 FSYSVDNSLKPTARYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAP 200
+ L + ++ I+ + KV++ PQ++ ++ L + + P
Sbjct: 258 IGLPLTAKLSLQQYFYSLKLKIDSEGFAKVVEKMPQVVSLHQNVIMKPVEFLLGRAI--P 315
Query: 201 RDSVVKMVKKHPQLLHYSID 220
V MV K PQL+ ++
Sbjct: 316 LQDVASMVIKCPQLIALRVE 335
>Medtr3g092710.1 | plastid transcriptionally active 15 protein | HC
| chr3:42360298-42362077 | 20130731
Length = 506
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 37/226 (16%)
Query: 88 GVKNRDVRKTLLRQPQILEYTIENNLKAHVDFLRGLG-IPNSRIGQIIAAAPSLFSYSVD 146
G + K L R P IL Y++E+ L+ H+ FLR + + +I +I+ P++F+ S +
Sbjct: 264 GGDEDSIGKVLNRFPIILNYSVEH-LEEHIKFLRCFADLDDQQIFKIVLVFPAIFTSSRE 322
Query: 147 NSLKPTARYLVEEVGINEKDLGKVIQLSPQIL--------VQRIDISWNTRYMFLSKELG 198
L+P ++L +E G++ ++ K++ + L ++ + Y + +KEL
Sbjct: 323 RKLRPRIQFL-KECGLDADEIFKLLTKAALFLSISFRSNLAYKLGVLVKIGYKYRTKELA 381
Query: 199 -----APRDSVVKMVKKHPQLLHY--SIDDGLLPRINFLRSIGMKNPDIXXXXXXXXXXX 251
+ R S M K L+Y S++D + ++ K+P I
Sbjct: 382 VAIAASTRISCENMQKMVSLFLNYGFSLED--------IFAMSKKHPQILQYH------- 426
Query: 252 XXXXEDNLKPKYLYLVNELRNEVKSLTKYPMYLSLSLDQRIRPRHK 297
+L+ K Y++ E+ +++ L +P YL LD RI+ R++
Sbjct: 427 ----HASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHRYE 468