Miyakogusa Predicted Gene

Lj2g3v3246900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3246900.1 Non Characterized Hit- tr|A2Z6T7|A2Z6T7_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,42.71,9e-17,RCC_reductase,Red chlorophyll catabolite reductase;
seg,NULL,CUFF.39939.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g096150.1 | red chlorophyll catabolite reductase, putative...   484   e-137

>Medtr5g096150.1 | red chlorophyll catabolite reductase, putative |
           HC | chr5:42035639-42033043 | 20130731
          Length = 319

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 227/273 (83%), Positives = 253/273 (92%)

Query: 45  ETNGRSKFLDFPFVSAPHKNLMVDLVSSFENRFHSQLLPCSLPPDVQHYQSQTGAAQVSL 104
           +  GRSKFL+FPFVSAPHKNLM+DLVS+ E+RF S LLPCSLPPDVQ+Y+S+ G +QVSL
Sbjct: 47  KKQGRSKFLEFPFVSAPHKNLMLDLVSTVEDRFESHLLPCSLPPDVQYYKSKNGTSQVSL 106

Query: 105 HIRPGHTDSPIDFVLGSWVHVALPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMVI 164
           HIRP +TDSPIDFV+GSWVH  LPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTM+I
Sbjct: 107 HIRPSNTDSPIDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLI 166

Query: 165 LILDLPPRKDPVLWPDYLKTFYEDTKLDTHRQALERVPEVQSYFSSSLFIRTVASPTAIM 224
           L+LDLPPRKD VLWPDYLKTFYEDTKLDTH+QALE++PEVQ Y +SSLFIR+VASPTAI 
Sbjct: 167 LVLDLPPRKDLVLWPDYLKTFYEDTKLDTHKQALEKIPEVQPYITSSLFIRSVASPTAIF 226

Query: 225 VRIQTENGGEERMEEIIKNHLDPISKQVLGIWLDHCACAKREVGEEDRAYLKKRDGLIRN 284
           VRIQTEN   ER++EIIKNH+DP+SKQVLGIWLDHCACA+REVGEED+AYL KRDG+IRN
Sbjct: 227 VRIQTENDEGERIDEIIKNHIDPVSKQVLGIWLDHCACAEREVGEEDKAYLIKRDGVIRN 286

Query: 285 KTIEVDLGSSFPRLFGPEAANRILEAIKEYFAV 317
           KTIEVDLGSSFPRLFGPEAA +ILEAIKEYF V
Sbjct: 287 KTIEVDLGSSFPRLFGPEAAKQILEAIKEYFTV 319