Miyakogusa Predicted Gene

Lj2g3v3245810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3245810.1 Non Characterized Hit- tr|B9SYB3|B9SYB3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.92,3e-18,seg,NULL,NODE_37230_length_834_cov_169.990402.path2.1
         (294 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g064200.1 | GRAS family transcription factor | HC | chr4:2...   174   8e-44
Medtr2g097463.1 | GRAS family transcription factor | HC | chr2:4...   139   3e-33
Medtr2g097473.1 | GRAS family transcription factor | HC | chr2:4...   127   1e-29
Medtr2g097467.1 | GRAS family transcription factor | HC | chr2:4...   125   6e-29
Medtr4g064160.1 | GRAS family transcription factor | HC | chr4:2...    66   5e-11
Medtr7g062120.1 | GRAS family transcription factor | HC | chr7:2...    63   3e-10
Medtr2g097410.1 | GRAS family transcription factor | HC | chr2:4...    52   8e-07

>Medtr4g064200.1 | GRAS family transcription factor | HC |
           chr4:23928886-23931600 | 20130731
          Length = 652

 Score =  174 bits (442), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/298 (44%), Positives = 153/298 (51%), Gaps = 70/298 (23%)

Query: 2   DSLLENFPGSLNGCMFGNGPVSVFSNQNPGSGLNVEDSSSPSNHSELXXXXXXXXXXXXX 61
           ++L+ENFPGS+NGCMFGN PVSVFSNQNP +    EDS+S S  S+              
Sbjct: 5   ETLVENFPGSVNGCMFGNIPVSVFSNQNPENAFKFEDSNSISPSSD----------SVPS 54

Query: 62  XXXXXXXXXXXXXXXXXPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGR 121
                            PILRYISDILMDEED LE KPCMLQDCL+LQAAEKSFYDVLG 
Sbjct: 55  SVITSNGESSESSKYSNPILRYISDILMDEED-LETKPCMLQDCLKLQAAEKSFYDVLGS 113

Query: 122 SYPSSPHQVQGGFRDDNADPDDGFXXXXXXXXXXXXXXXDTSCESDLVNGAGDFESYFRQ 181
              +S           N D                             N   D       
Sbjct: 114 VTGTSSSSESYSNCSYNTD-----------------------------NSVVD------- 137

Query: 182 RALVDSP-GNSSEVLDGVPLDPLRGTQPGALFSNGALDVIQWKVKPQVIQESVIRGSAAT 240
               DSP  N+ EV D +P DP RG      F     DV  WK+  +    S + GS   
Sbjct: 138 ---CDSPENNAYEVFDKIPYDP-RG------FFGSPSDV--WKMNEE---GSFVLGS--- 179

Query: 241 KGPREKRGHLMN----NFSHVEEERSNKLSAVYSDDSELSEMFDEVLLCKDGKSPSFF 294
           +G  EKRG+LMN      SH E+ R NK+SAVY DD+ELSEMFD+VLLCKDGKSPS F
Sbjct: 180 RGLGEKRGYLMNCNDIGISHEEDLRRNKVSAVYYDDTELSEMFDDVLLCKDGKSPSIF 237


>Medtr2g097463.1 | GRAS family transcription factor | HC |
           chr2:41619642-41622827 | 20130731
          Length = 657

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 123/217 (56%), Gaps = 25/217 (11%)

Query: 79  PILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQVQGGFRDDN 138
           P LRYISDILMDEE DLER+PCMLQ+CLRL+AAEKSFYDVLG + PS          D +
Sbjct: 53  PFLRYISDILMDEEYDLEREPCMLQECLRLKAAEKSFYDVLGNNNPSP---------DGS 103

Query: 139 ADPDDGFXXXXXXXXXXXXXXXDTSCESDLVNGAGDFESYFRQRALVDSPGNSSEVLDGV 198
            D D  F               D SCESD VN  G+F+S + +   + +P          
Sbjct: 104 TDLDGNFGRTVSFESNGSSCTTDNSCESDSVNLVGEFDSSYLE---LQTPLVEQNYYGVA 160

Query: 199 PLDPLRGTQPGA-LFSNGALDVIQW-KVKPQVIQESVIRGSAATKGPREKRGHLM---NN 253
             DP+   Q  A  F NG      W +++P +++E      +A+  PREKR H M   ++
Sbjct: 161 QPDPVVNEQQAANHFQNGTWS---WNEIQPVMVEE-----VSASLVPREKRSHAMDDNDD 212

Query: 254 FSHVEEERSNKLSAVYSDDSELSEMFDEVLLCKDGKS 290
            S+ +E R +K+SA++SD+ E  E+ DEVLLC+ G++
Sbjct: 213 TSNEQEGRGSKISAIFSDELEPPEILDEVLLCQQGRT 249


>Medtr2g097473.1 | GRAS family transcription factor | HC |
           chr2:41625860-41628478 | 20130731
          Length = 656

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 113/212 (53%), Gaps = 18/212 (8%)

Query: 80  ILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQVQGGFRDDNA 139
           ILRYI+DILMDEEDDLE+KPCMLQ+CLRLQAAEKSFYDVLG + PS          +D+ 
Sbjct: 54  ILRYINDILMDEEDDLEQKPCMLQECLRLQAAEKSFYDVLGHNQPSP---------NDST 104

Query: 140 DPDDGFXXXXXXXXXXXXXXXDTSCESDLVNGAGDFESYFRQRALVDSPGNSSEVLDGVP 199
           DPD  F               D S ES+ VN   +FES+  Q   + SP       D   
Sbjct: 105 DPDGNFNCAASFERNGSSCIADNSYESNWVNHVVEFESFPIQ---LKSPLIEKNYYDLTE 161

Query: 200 LDPLR-GTQPGALFSNGALDVIQWKVKPQVIQESVIRGSAATKGPREKRGHLMNNFSHVE 258
            DP+   TQ    F NG      W     V  E V+  +   K  R ++    N+  + +
Sbjct: 162 ADPVVIETQGANHFHNGTWS---WNDIQPVTLEEVLPSTVPEK--RSRKMDRDNDTCNEQ 216

Query: 259 EERSNKLSAVYSDDSELSEMFDEVLLCKDGKS 290
           E R +K+SA+ SD+ E  E+ DEVLL + GK+
Sbjct: 217 EGRGSKVSAILSDELEPPEILDEVLLYQKGKT 248


>Medtr2g097467.1 | GRAS family transcription factor | HC |
           chr2:41622958-41625456 | 20130731
          Length = 656

 Score =  125 bits (313), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 117/215 (54%), Gaps = 24/215 (11%)

Query: 80  ILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQVQGGFRDDNA 139
           ILRYI+DILMDEEDDLE+KPCMLQ+CLRLQAAEKSFYDVLG + PS          +D+ 
Sbjct: 54  ILRYINDILMDEEDDLEQKPCMLQECLRLQAAEKSFYDVLGHNQPSP---------NDST 104

Query: 140 DPDDGFXXXXXXXXXXXXXXXDTSCESDLVNGAGDFESYFRQRALVDSPGNSSEVLDGVP 199
           DPD  F               D S ES+ VN   +F+S   Q   + +P       D   
Sbjct: 105 DPDGNFDHDASFERNGSSYTTDNSYESNWVNHVVEFDSSSIQ---LQTPLIEKNYDDLTE 161

Query: 200 LDPLR-GTQPGALFSNGALDVIQWKVKPQVIQESVIRGSAATKGPREKRGHLMNN---FS 255
            DP+   T+    F NG      W      IQ   ++  + +  P EKR H M+N     
Sbjct: 162 ADPVVIETRGDKHFCNGT-----WSWND--IQPVTVKEVSPSTVP-EKRSHKMDNDNGTC 213

Query: 256 HVEEERSNKLSAVYSDDSELSEMFDEVLLCKDGKS 290
           + +E R++K+SA++SD+ E  E+ DEVLL + GK+
Sbjct: 214 NEQEGRASKVSAIFSDELEPPEILDEVLLYQTGKT 248


>Medtr4g064160.1 | GRAS family transcription factor | HC |
           chr4:23918205-23915589 | 20130731
          Length = 686

 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)

Query: 80  ILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQ 129
           +LRYI+ +LM+E  D++ KPCM  D L LQAAEKSFY+V+G++YPSS  Q
Sbjct: 38  VLRYINQMLMEE--DMDMKPCMFHDSLALQAAEKSFYEVIGQTYPSSSVQ 85


>Medtr7g062120.1 | GRAS family transcription factor | HC |
           chr7:22543834-22546912 | 20130731
          Length = 742

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)

Query: 80  ILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSP 127
           +L YI++ILM+E  D+E K CMLQD L LQ AEKSFY+V+G  YP SP
Sbjct: 76  VLSYINNILMEE--DMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSP 121


>Medtr2g097410.1 | GRAS family transcription factor | HC |
           chr2:41596394-41599413 | 20130731
          Length = 743

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 2/49 (4%)

Query: 81  LRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQ 129
           ++YIS ILM+EE   E+KPCM  D L LQ  EK F+D L  + P SP+Q
Sbjct: 69  VKYISQILMEEE--FEQKPCMCYDPLSLQHTEKIFFDALESNLPLSPNQ 115