Miyakogusa Predicted Gene
- Lj2g3v3245700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3245700.1 Non Characterized Hit- tr|A5B745|A5B745_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.91,6e-19,Frigida,Frigida-like; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_48423_length_1165_cov_56.521030.path2.1
(281 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g094400.1 | frigida-LIKE protein | HC | chr5:41255364-4125... 319 2e-87
Medtr3g056070.1 | frigida-LIKE protein | HC | chr3:22278030-2228... 244 6e-65
Medtr1g103710.1 | frigida-LIKE protein | HC | chr1:46944448-4694... 97 2e-20
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2... 96 5e-20
Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968... 87 1e-17
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2... 76 4e-14
Medtr8g083500.1 | frigida-LIKE protein | HC | chr8:43605849-4361... 57 1e-08
Medtr2g091240.1 | frigida-LIKE protein | LC | chr2:39368928-3937... 57 2e-08
Medtr8g467200.1 | frigida-LIKE protein | LC | chr8:24079712-2407... 54 1e-07
Medtr2g091260.1 | frigida-LIKE protein | LC | chr2:39400462-3939... 50 2e-06
>Medtr5g094400.1 | frigida-LIKE protein | HC |
chr5:41255364-41258863 | 20130731
Length = 595
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/345 (52%), Positives = 219/345 (63%), Gaps = 64/345 (18%)
Query: 1 MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
L EL + ELA +S A+ ND++ +L I L+D+V ++QKLI+RGK +LAVK+IF F
Sbjct: 251 FLPELNVGELAAYSATAATNDELPDLYQIIALSDRVQDVIQKLIERGKQILAVKFIFHFK 310
Query: 61 LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFP 120
L +K PPVP+LKA+VN++EKL +RLA EGKS+ EI +REI+ALKSVIKVIE++NL+SEFP
Sbjct: 311 LTEKTPPVPVLKAYVNDAEKLAKRLASEGKSLNEIKSREIHALKSVIKVIESYNLDSEFP 370
Query: 121 TTSIEQRIEELKKLK------TTPAFAAKPPQH-QQQQSGIKRPRISAPVGPXXXXXXXX 173
SIE+RIEEL K + PAFAA P QH QQQ SGIKRP SAP GP
Sbjct: 371 RASIERRIEELSKQRKVGGKPVAPAFAAMPLQHPQQQLSGIKRPLTSAPFGPAPVLNNAG 430
Query: 174 XXXXXINQYQQPHFQSTGLLPEHSNPYMNLPP-LPYGVMAPTPTVPSYTGPSTGPYGIDG 232
I+QYQQPHFQST LLPEH NPYM++PP P+G+ A TPTV SYTGPSTGPYG+DG
Sbjct: 431 GTPSTIHQYQQPHFQSTSLLPEHPNPYMSMPPTTPFGMKAATPTVSSYTGPSTGPYGLDG 490
Query: 233 VPTG----------H------------------SGNLGEGGSHPNSSE---------TLV 255
VP G H +GNL +GGSHPNSSE T+
Sbjct: 491 VPMGPIGNLNQGGSHLNSSQPQVMPGYYVPMGPNGNLSQGGSHPNSSEPRVMPGYYATMG 550
Query: 256 PS-------------------GYYDSVPAYEGYGLQHYYKTSYPQ 281
PS GYYDS+ A GYGLQHYY TSYPQ
Sbjct: 551 PSGNLDQGGSHPNPSEPQVMPGYYDSMSASGGYGLQHYYGTSYPQ 595
>Medtr3g056070.1 | frigida-LIKE protein | HC |
chr3:22278030-22282431 | 20130731
Length = 525
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 178/300 (59%), Gaps = 19/300 (6%)
Query: 1 MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
++SE L F+ A+ N + +L G DKVP +VQKL+++GKHVLAVK++F F+
Sbjct: 226 IVSEFRGYVLVEFAARAAINGEFMQLCRDIGFTDKVPEIVQKLVEKGKHVLAVKFVFEFS 285
Query: 61 LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFP 120
L DK PPVPILKA V+ES KL RR + EGK EIT RE+ LK VI++IE H LESE+P
Sbjct: 286 LADKIPPVPILKAAVDESRKLARRRSEEGKRRMEITDRELRVLKRVIEIIEIHKLESEYP 345
Query: 121 TTSIEQRIEELK----KLKT-TPAF-----------AAKPPQHQQQQSGIKRPRISAPVG 164
S+EQRIE+LK +K TPA + + QQQQ+G K PR S VG
Sbjct: 346 RDSLEQRIEQLKGQDPNMKDRTPASILNQHTLQRRQQKRRMKKQQQQNGNKVPRTSTSVG 405
Query: 165 PXXX-XXXXXXXXXXINQYQQPHFQSTGLLPEHSNPYMNLPPLPYGVMAPTPTVPSYTGP 223
P + QYQQP +GL PEH NPY G++A PT+PSYTGP
Sbjct: 406 PAAVLKNDTNNDNSTMRQYQQPLVNPSGLFPEHPNPYKIPQATSSGMVASIPTIPSYTGP 465
Query: 224 STGPYGIDGVPTGHSGNLGEGGSHPNSSETLVPSGYYDSVP-AYEGYGLQHYYKT-SYPQ 281
STGPYG G+P G GNL GGSH NSSE VPS +Y S Y G QH+Y+ YPQ
Sbjct: 466 STGPYGFAGIPMGPGGNLILGGSHLNSSEPRVPSAFYGSNNFTYGGINRQHHYQAPYYPQ 525
>Medtr1g103710.1 | frigida-LIKE protein | HC |
chr1:46944448-46941301 | 20130731
Length = 519
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Query: 25 ELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRR 84
+L L GL D++ ++Q+LI +G+ + AV + F LVDKFPPVP+LK+++ +++K+
Sbjct: 287 KLALSLGLTDQMADMIQELISKGQQLDAVHFTFEVGLVDKFPPVPLLKSYLKDAKKVAAS 346
Query: 85 LAHE----GKSVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLK 135
+ + G++ +E +ALK+VIK IE +NLE+EFP S+++R+E+L+K+K
Sbjct: 347 ILEDPNNAGRAGYLAARKEQSALKAVIKCIEEYNLEAEFPAESLKKRLEQLEKVK 401
>Medtr8g010170.1 | ABI3-interacting protein | HC |
chr8:2595983-2590280 | 20130731
Length = 545
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 3 SELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLV 62
S+ EL+ M S Q ++L GL++K+PG+++ L+ G+ + AV F F+L
Sbjct: 315 SDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIKVLVKNGRQIDAVNLAFAFDLT 374
Query: 63 DKFPPVPILKAHVNESEKLGRRLAHEGKS---VKEITAREINALKSVIKVIENHNLESEF 119
D+F P+P+LK+++N+++K + S ++ RE+ ALK+VIK IE H LE ++
Sbjct: 375 DQFSPIPLLKSYLNDAKKTSSPVKSGNSSPTAQLDVNERELFALKAVIKCIEEHKLEEQY 434
Query: 120 PTTSIEQRIEELKKLKTTPAFAAKPPQHQQQQSGIKRPRIS-APVGP 165
P S+++R+ +L+K K A K + + + KRPR + A GP
Sbjct: 435 PIDSLQKRMIQLEKAK-----ADKKRETEATKPQPKRPRANGAGYGP 476
>Medtr4g095080.1 | frigida-like protein | HC |
chr4:39679199-39682625 | 20130731
Length = 545
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 1 MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
+ SE EL + N EL GL KVP L++ LI+ GKH+ AV ++ F
Sbjct: 303 IASEFDEEELCKLVPAVAQNRSAPELCRSIGLTHKVPALIEALINNGKHIAAVHFVQLFK 362
Query: 61 LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVK----EITAREINALKSVIKVIENHNLE 116
L + FPPVP+L+ ++ + + A + + + A+E+ AL++VIK IE + E
Sbjct: 363 LQESFPPVPLLRTYLKNQRRNSQVKADNVRDIATAKIDANAQELAALRNVIKCIEEYEFE 422
Query: 117 SEFPTTSIEQRIEELKKLKT 136
SE+P ++ +R+ +L+K KT
Sbjct: 423 SEYPLDTLHKRVHQLEKAKT 442
>Medtr8g010160.1 | ABI3-interacting protein | HC |
chr8:2588108-2583935 | 20130731
Length = 547
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 9 ELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPV 68
EL+ M S Q ++L GL++K+PG+++ L + G+ + AV F F+L +F PV
Sbjct: 321 ELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLANSGRQIDAVNLAFAFDLTKQFSPV 380
Query: 69 PILKAHVNESEKLG---RRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFPTTSIE 125
+LK+++ ++ +R+ + E+ RE+ A K+VIK IE L+ ++P +
Sbjct: 381 SLLKSYLQDARNSCSPVKRVNSSPTAQIEVNERELIAHKAVIKCIEERKLDEQYPLDPLM 440
Query: 126 QRIEELKKLKTTPAFAAKPPQHQQQQSGIKRPR 158
+R+ +L+K K A K + + + KRPR
Sbjct: 441 KRVVQLEKAK-----ADKKRETEATKPQPKRPR 468
>Medtr8g083500.1 | frigida-LIKE protein | HC |
chr8:43605849-43610391 | 20130731
Length = 539
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 32 LADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRRLAHEGK- 90
DK+ ++ +L+ GK + AV + L ++F P+ +L ++V E + G
Sbjct: 275 FGDKMIDIIDELVKNGKEMEAVYFASESGLTERFKPIELLNSYVRNYENNVATILKSGNN 334
Query: 91 ---SVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLK 135
+ E E+ ++K VIK +E+H LES+F +++R+ +L K K
Sbjct: 335 SQVATDEANTLELTSIKDVIKCVEDHKLESKFRLDKLKRRVSQLDKNK 382
>Medtr2g091240.1 | frigida-LIKE protein | LC |
chr2:39368928-39372660 | 20130731
Length = 591
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Query: 10 LATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVP 69
L F+F+A + EL G A+K V+ LI R + V+AV++I +NL +K V
Sbjct: 461 LELFAFVAEHKIAM-ELFGTMGFANKASDFVENLIRRKQFVVAVRFISAYNLANKNKLVD 519
Query: 70 ILKAHVNESEKLGRRLAHEGKSVK----EITAR----EINALKSVIKVIENHNLES-EFP 120
+L+ HV + +L EG K EI + EI +L++V++ I +HNL+S +
Sbjct: 520 LLQEHVQNA-----KLICEGSCKKTNSIEIKDKARDQEIASLRTVLQCILDHNLQSADLL 574
Query: 121 TTSIEQRIEELK 132
I+ RI ELK
Sbjct: 575 DKEIQYRILELK 586
>Medtr8g467200.1 | frigida-LIKE protein | LC |
chr8:24079712-24077248 | 20130731
Length = 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 10 LATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVP 69
L F +A + + EL G DK+ V LI +H+ AV++IF +NLVDK+ V
Sbjct: 276 LKLFEVVAHHKEAV-ELFRTLGFVDKISYFVDNLIKNLRHIGAVRFIFAYNLVDKYRLVS 334
Query: 70 I--LKAHVNESEKLG----RRLAHEGKSVKEITAR--EINALKSVIKVIENHNLE 116
I L+ + +++++ RR H VK AR EI +LK +++ I + NLE
Sbjct: 335 IVMLQLEMQKAKEISYEVVRREKHREPKVK---ARDTEIASLKDILQCISDCNLE 386
>Medtr2g091260.1 | frigida-LIKE protein | LC |
chr2:39400462-39395750 | 20130731
Length = 877
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 25 ELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRR 84
EL G A+KV V+ LI R + V+AV++ +NL D+ + +L+ HV ++ +
Sbjct: 761 ELFETLGFANKVSDFVKNLIRRKQFVVAVRFSCAYNLADENQSIDMLREHVQNAKLICES 820
Query: 85 LAHEGKSVK---EITAREINALKSVIKVIENHNLESE-FPTTSIEQRIEELKKLK 135
+ SV+ + +EI L +V++ I ++LESE I+ RI EL K
Sbjct: 821 SCKKTNSVEIKDKARDQEIACLGTVLQCISENSLESEDLLRKEIQYRILELNSNK 875