Miyakogusa Predicted Gene

Lj2g3v3244690.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3244690.1 tr|Q9LUV4|Q9LUV4_ARATH FRIGIDA-like protein
OS=Arabidopsis thaliana GN=At3g22440 PE=2 SV=1,29.57,6e-19,FAMILY NOT
NAMED,NULL; seg,NULL;
Frigida,Frigida-like,NODE_48423_length_1165_cov_56.521030.path1.1
         (281 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g094400.1 | frigida-LIKE protein | HC | chr5:41255364-4125...   319   2e-87
Medtr3g056070.1 | frigida-LIKE protein | HC | chr3:22278030-2228...   244   6e-65
Medtr1g103710.1 | frigida-LIKE protein | HC | chr1:46944448-4694...    97   2e-20
Medtr8g010170.1 | ABI3-interacting protein | HC | chr8:2595983-2...    96   5e-20
Medtr4g095080.1 | frigida-like protein | HC | chr4:39679199-3968...    87   1e-17
Medtr8g010160.1 | ABI3-interacting protein | HC | chr8:2588108-2...    76   4e-14
Medtr8g083500.1 | frigida-LIKE protein | HC | chr8:43605849-4361...    57   1e-08
Medtr2g091240.1 | frigida-LIKE protein | LC | chr2:39368928-3937...    57   2e-08
Medtr8g467200.1 | frigida-LIKE protein | LC | chr8:24079712-2407...    54   1e-07
Medtr2g091260.1 | frigida-LIKE protein | LC | chr2:39400462-3939...    50   2e-06

>Medtr5g094400.1 | frigida-LIKE protein | HC |
           chr5:41255364-41258863 | 20130731
          Length = 595

 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 182/345 (52%), Positives = 219/345 (63%), Gaps = 64/345 (18%)

Query: 1   MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
            L EL + ELA +S  A+ ND++ +L  I  L+D+V  ++QKLI+RGK +LAVK+IF F 
Sbjct: 251 FLPELNVGELAAYSATAATNDELPDLYQIIALSDRVQDVIQKLIERGKQILAVKFIFHFK 310

Query: 61  LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFP 120
           L +K PPVP+LKA+VN++EKL +RLA EGKS+ EI +REI+ALKSVIKVIE++NL+SEFP
Sbjct: 311 LTEKTPPVPVLKAYVNDAEKLAKRLASEGKSLNEIKSREIHALKSVIKVIESYNLDSEFP 370

Query: 121 TTSIEQRIEELKKLK------TTPAFAAKPPQH-QQQQSGIKRPRISAPVGPXXXXXXXX 173
             SIE+RIEEL K +        PAFAA P QH QQQ SGIKRP  SAP GP        
Sbjct: 371 RASIERRIEELSKQRKVGGKPVAPAFAAMPLQHPQQQLSGIKRPLTSAPFGPAPVLNNAG 430

Query: 174 XXXXXINQYQQPHFQSTGLLPEHSNPYMNLPP-LPYGVMAPTPTVPSYTGPSTGPYGIDG 232
                I+QYQQPHFQST LLPEH NPYM++PP  P+G+ A TPTV SYTGPSTGPYG+DG
Sbjct: 431 GTPSTIHQYQQPHFQSTSLLPEHPNPYMSMPPTTPFGMKAATPTVSSYTGPSTGPYGLDG 490

Query: 233 VPTG----------H------------------SGNLGEGGSHPNSSE---------TLV 255
           VP G          H                  +GNL +GGSHPNSSE         T+ 
Sbjct: 491 VPMGPIGNLNQGGSHLNSSQPQVMPGYYVPMGPNGNLSQGGSHPNSSEPRVMPGYYATMG 550

Query: 256 PS-------------------GYYDSVPAYEGYGLQHYYKTSYPQ 281
           PS                   GYYDS+ A  GYGLQHYY TSYPQ
Sbjct: 551 PSGNLDQGGSHPNPSEPQVMPGYYDSMSASGGYGLQHYYGTSYPQ 595


>Medtr3g056070.1 | frigida-LIKE protein | HC |
           chr3:22278030-22282431 | 20130731
          Length = 525

 Score =  244 bits (623), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 144/300 (48%), Positives = 178/300 (59%), Gaps = 19/300 (6%)

Query: 1   MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
           ++SE     L  F+  A+ N +  +L    G  DKVP +VQKL+++GKHVLAVK++F F+
Sbjct: 226 IVSEFRGYVLVEFAARAAINGEFMQLCRDIGFTDKVPEIVQKLVEKGKHVLAVKFVFEFS 285

Query: 61  LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFP 120
           L DK PPVPILKA V+ES KL RR + EGK   EIT RE+  LK VI++IE H LESE+P
Sbjct: 286 LADKIPPVPILKAAVDESRKLARRRSEEGKRRMEITDRELRVLKRVIEIIEIHKLESEYP 345

Query: 121 TTSIEQRIEELK----KLKT-TPAF-----------AAKPPQHQQQQSGIKRPRISAPVG 164
             S+EQRIE+LK     +K  TPA              +  + QQQQ+G K PR S  VG
Sbjct: 346 RDSLEQRIEQLKGQDPNMKDRTPASILNQHTLQRRQQKRRMKKQQQQNGNKVPRTSTSVG 405

Query: 165 PXXX-XXXXXXXXXXINQYQQPHFQSTGLLPEHSNPYMNLPPLPYGVMAPTPTVPSYTGP 223
           P              + QYQQP    +GL PEH NPY        G++A  PT+PSYTGP
Sbjct: 406 PAAVLKNDTNNDNSTMRQYQQPLVNPSGLFPEHPNPYKIPQATSSGMVASIPTIPSYTGP 465

Query: 224 STGPYGIDGVPTGHSGNLGEGGSHPNSSETLVPSGYYDSVP-AYEGYGLQHYYKT-SYPQ 281
           STGPYG  G+P G  GNL  GGSH NSSE  VPS +Y S    Y G   QH+Y+   YPQ
Sbjct: 466 STGPYGFAGIPMGPGGNLILGGSHLNSSEPRVPSAFYGSNNFTYGGINRQHHYQAPYYPQ 525


>Medtr1g103710.1 | frigida-LIKE protein | HC |
           chr1:46944448-46941301 | 20130731
          Length = 519

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 80/115 (69%), Gaps = 4/115 (3%)

Query: 25  ELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRR 84
           +L L  GL D++  ++Q+LI +G+ + AV + F   LVDKFPPVP+LK+++ +++K+   
Sbjct: 287 KLALSLGLTDQMADMIQELISKGQQLDAVHFTFEVGLVDKFPPVPLLKSYLKDAKKVAAS 346

Query: 85  LAHE----GKSVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLK 135
           +  +    G++      +E +ALK+VIK IE +NLE+EFP  S+++R+E+L+K+K
Sbjct: 347 ILEDPNNAGRAGYLAARKEQSALKAVIKCIEEYNLEAEFPAESLKKRLEQLEKVK 401


>Medtr8g010170.1 | ABI3-interacting protein | HC |
           chr8:2595983-2590280 | 20130731
          Length = 545

 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 9/167 (5%)

Query: 3   SELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLV 62
           S+    EL+    M S   Q ++L    GL++K+PG+++ L+  G+ + AV   F F+L 
Sbjct: 315 SDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIKVLVKNGRQIDAVNLAFAFDLT 374

Query: 63  DKFPPVPILKAHVNESEKLGRRLAHEGKS---VKEITAREINALKSVIKVIENHNLESEF 119
           D+F P+P+LK+++N+++K    +     S     ++  RE+ ALK+VIK IE H LE ++
Sbjct: 375 DQFSPIPLLKSYLNDAKKTSSPVKSGNSSPTAQLDVNERELFALKAVIKCIEEHKLEEQY 434

Query: 120 PTTSIEQRIEELKKLKTTPAFAAKPPQHQQQQSGIKRPRIS-APVGP 165
           P  S+++R+ +L+K K     A K  + +  +   KRPR + A  GP
Sbjct: 435 PIDSLQKRMIQLEKAK-----ADKKRETEATKPQPKRPRANGAGYGP 476


>Medtr4g095080.1 | frigida-like protein | HC |
           chr4:39679199-39682625 | 20130731
          Length = 545

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 1   MLSELTMNELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFN 60
           + SE    EL       + N    EL    GL  KVP L++ LI+ GKH+ AV ++  F 
Sbjct: 303 IASEFDEEELCKLVPAVAQNRSAPELCRSIGLTHKVPALIEALINNGKHIAAVHFVQLFK 362

Query: 61  LVDKFPPVPILKAHVNESEKLGRRLAHEGKSVK----EITAREINALKSVIKVIENHNLE 116
           L + FPPVP+L+ ++    +  +  A   + +     +  A+E+ AL++VIK IE +  E
Sbjct: 363 LQESFPPVPLLRTYLKNQRRNSQVKADNVRDIATAKIDANAQELAALRNVIKCIEEYEFE 422

Query: 117 SEFPTTSIEQRIEELKKLKT 136
           SE+P  ++ +R+ +L+K KT
Sbjct: 423 SEYPLDTLHKRVHQLEKAKT 442


>Medtr8g010160.1 | ABI3-interacting protein | HC |
           chr8:2588108-2583935 | 20130731
          Length = 547

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 8/153 (5%)

Query: 9   ELATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPV 68
           EL+    M S   Q ++L    GL++K+PG+++ L + G+ + AV   F F+L  +F PV
Sbjct: 321 ELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLANSGRQIDAVNLAFAFDLTKQFSPV 380

Query: 69  PILKAHVNESEKLG---RRLAHEGKSVKEITAREINALKSVIKVIENHNLESEFPTTSIE 125
            +LK+++ ++       +R+     +  E+  RE+ A K+VIK IE   L+ ++P   + 
Sbjct: 381 SLLKSYLQDARNSCSPVKRVNSSPTAQIEVNERELIAHKAVIKCIEERKLDEQYPLDPLM 440

Query: 126 QRIEELKKLKTTPAFAAKPPQHQQQQSGIKRPR 158
           +R+ +L+K K     A K  + +  +   KRPR
Sbjct: 441 KRVVQLEKAK-----ADKKRETEATKPQPKRPR 468


>Medtr8g083500.1 | frigida-LIKE protein | HC |
           chr8:43605849-43610391 | 20130731
          Length = 539

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 32  LADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRRLAHEGK- 90
             DK+  ++ +L+  GK + AV +     L ++F P+ +L ++V   E     +   G  
Sbjct: 275 FGDKMIDIIDELVKNGKEMEAVYFASESGLTERFKPIELLNSYVRNYENNVATILKSGNN 334

Query: 91  ---SVKEITAREINALKSVIKVIENHNLESEFPTTSIEQRIEELKKLK 135
              +  E    E+ ++K VIK +E+H LES+F    +++R+ +L K K
Sbjct: 335 SQVATDEANTLELTSIKDVIKCVEDHKLESKFRLDKLKRRVSQLDKNK 382


>Medtr2g091240.1 | frigida-LIKE protein | LC |
           chr2:39368928-39372660 | 20130731
          Length = 591

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 15/132 (11%)

Query: 10  LATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVP 69
           L  F+F+A     + EL    G A+K    V+ LI R + V+AV++I  +NL +K   V 
Sbjct: 461 LELFAFVAEHKIAM-ELFGTMGFANKASDFVENLIRRKQFVVAVRFISAYNLANKNKLVD 519

Query: 70  ILKAHVNESEKLGRRLAHEGKSVK----EITAR----EINALKSVIKVIENHNLES-EFP 120
           +L+ HV  +     +L  EG   K    EI  +    EI +L++V++ I +HNL+S +  
Sbjct: 520 LLQEHVQNA-----KLICEGSCKKTNSIEIKDKARDQEIASLRTVLQCILDHNLQSADLL 574

Query: 121 TTSIEQRIEELK 132
              I+ RI ELK
Sbjct: 575 DKEIQYRILELK 586


>Medtr8g467200.1 | frigida-LIKE protein | LC |
           chr8:24079712-24077248 | 20130731
          Length = 491

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)

Query: 10  LATFSFMASANDQISELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVP 69
           L  F  +A   + + EL    G  DK+   V  LI   +H+ AV++IF +NLVDK+  V 
Sbjct: 276 LKLFEVVAHHKEAV-ELFRTLGFVDKISYFVDNLIKNLRHIGAVRFIFAYNLVDKYRLVS 334

Query: 70  I--LKAHVNESEKLG----RRLAHEGKSVKEITAR--EINALKSVIKVIENHNLE 116
           I  L+  + +++++     RR  H    VK   AR  EI +LK +++ I + NLE
Sbjct: 335 IVMLQLEMQKAKEISYEVVRREKHREPKVK---ARDTEIASLKDILQCISDCNLE 386


>Medtr2g091260.1 | frigida-LIKE protein | LC |
           chr2:39400462-39395750 | 20130731
          Length = 877

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 25  ELTLIAGLADKVPGLVQKLIDRGKHVLAVKYIFGFNLVDKFPPVPILKAHVNESEKLGRR 84
           EL    G A+KV   V+ LI R + V+AV++   +NL D+   + +L+ HV  ++ +   
Sbjct: 761 ELFETLGFANKVSDFVKNLIRRKQFVVAVRFSCAYNLADENQSIDMLREHVQNAKLICES 820

Query: 85  LAHEGKSVK---EITAREINALKSVIKVIENHNLESE-FPTTSIEQRIEELKKLK 135
              +  SV+   +   +EI  L +V++ I  ++LESE      I+ RI EL   K
Sbjct: 821 SCKKTNSVEIKDKARDQEIACLGTVLQCISENSLESEDLLRKEIQYRILELNSNK 875