Miyakogusa Predicted Gene

Lj2g3v3224500.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224500.3 CUFF.40158.3
         (102 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g094210.1 | Lipid transfer protein | HC | chr5:41145512-41...   102   6e-23
Medtr3g055250.1 | Lipid transfer protein | HC | chr3:21730556-21...    91   2e-19
Medtr7g052640.1 | Nodule Cysteine-Rich (NCR) secreted peptide | ...    62   1e-10
Medtr4g069200.1 | Lipid transfer protein | HC | chr4:26010191-26...    53   7e-08
Medtr4g069220.1 | Lipid transfer protein | HC | chr4:26018774-26...    52   2e-07
Medtr4g069170.1 | Lipid transfer protein | HC | chr4:26002859-26...    48   2e-06

>Medtr5g094210.1 | Lipid transfer protein | HC |
           chr5:41145512-41145820 | 20130731
          Length = 102

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 1   MAQSSGKALVQWXXXXXXXXXXXXXXXVALCNIDTSQLK-SCRAAATGEHPPPPDKNCCD 59
           MA S GKAL QW               V +CNID + LK SC    TG +PP  D+ CC 
Sbjct: 1   MAHSQGKALAQWMIGALLFAMLAGSLAVQICNIDPNDLKQSCSKFVTGRNPPRADEACCG 60

Query: 60  VVRQANLPCLCKYKSALPSFGINPTQALKLPSECGLSTPPEC 101
           V+R+ANLPCLC YKSAL  +GIN  +AL LP +CGL TP  C
Sbjct: 61  VLRRANLPCLCGYKSALTYYGINAKKALALPGQCGLQTPSNC 102


>Medtr3g055250.1 | Lipid transfer protein | HC |
           chr3:21730556-21730236 | 20130731
          Length = 106

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 55/75 (73%)

Query: 28  VALCNIDTSQLKSCRAAATGEHPPPPDKNCCDVVRQANLPCLCKYKSALPSFGINPTQAL 87
           + +C+IDT++L  C  A TG+ PP P   CC ++++A+L CLC+YKS LP+ GINPT+AL
Sbjct: 20  IIVCSIDTNKLDVCHDAITGKRPPKPTTKCCALIKKADLSCLCRYKSLLPALGINPTKAL 79

Query: 88  KLPSECGLSTPPECQ 102
            LP +CG  TPP C+
Sbjct: 80  ALPKKCGRKTPPGCR 94


>Medtr7g052640.1 | Nodule Cysteine-Rich (NCR) secreted peptide | HC
           | chr7:18510625-18509814 | 20130731
          Length = 104

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 28  VALCNIDTSQLKSCRAAATGEHPPPPDKNCCDVVRQANLPCLCKYKSA--LPSFGINPTQ 85
           ++LCN++   L +C+ + T  +P  P   CC  +  A+L CLC YK++  LP  GI+PT 
Sbjct: 29  MSLCNMNEDGLDACKPSVTQPYPAKPSTECCKALTGADLQCLCSYKNSAELPLLGIDPTL 88

Query: 86  ALKLPSECGLSTPPEC 101
           A  LP EC L+ P  C
Sbjct: 89  AASLPKECDLTPPSNC 104


>Medtr4g069200.1 | Lipid transfer protein | HC |
           chr4:26010191-26010639 | 20130731
          Length = 104

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)

Query: 28  VALCNIDTSQLKSCRAAATGEHPPPPD----KNCCDVVRQANLPCLCKYKSA--LPSFGI 81
           + +CN+   + ++C    +GE+         K CC V+ +A+L C C+YK++  L  +GI
Sbjct: 25  ITICNLTREERETCEPYVSGENSVDATRKTFKACCSVMAKADLECFCRYKNSILLSYYGI 84

Query: 82  NPTQALKLPSECGLSTPPEC 101
           +P  AL+LP +C L    +C
Sbjct: 85  DPKLALELPVKCKLRKSFKC 104


>Medtr4g069220.1 | Lipid transfer protein | HC |
           chr4:26018774-26019491 | 20130731
          Length = 104

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 29  ALCNIDTSQLKSCRAAATGEHP---PPPDKNCCDVVRQANLPCLCKYKSA--LPSFGINP 83
           +LC++    LK+C    +G++      P   CC  + +A+L CLC+YK +  L  +GI+P
Sbjct: 27  SLCHMTKQGLKACAPYVSGDNSVNGQKPSDVCCSAIAKADLQCLCRYKDSGLLSFYGIDP 86

Query: 84  TQALKLPSECGLSTPPEC 101
            QA++LP  C L     C
Sbjct: 87  NQAMELPVNCKLMDNFHC 104


>Medtr4g069170.1 | Lipid transfer protein | HC |
           chr4:26002859-26003563 | 20130731
          Length = 104

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 29  ALCNIDTSQLKSCRAAATGEHPPP---PDKNCCDVVRQANLPCLCKYKSA--LPSFGINP 83
           +LC +    LK+C    +G        P   CC    +A+L CLC YK +  L  +GI+P
Sbjct: 27  SLCQMTNKGLKACEPYVSGVKIAAFQIPSDACCHATAKADLECLCSYKDSGLLSFYGIDP 86

Query: 84  TQALKLPSECGLSTPPEC 101
            QA+ LP +C L     C
Sbjct: 87  DQAMDLPVKCKLVDSFNC 104