Miyakogusa Predicted Gene

Lj2g3v3224260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224260.1 Non Characterized Hit- tr|A9NK26|A9NK26_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,64.29,4e-19,ATP_synt_H,ATPase, V0 complex, subunit E; VACUOLAR ATP
SYNTHASE SUBUNIT H,ATPase, V0 complex, subuni,CUFF.39895.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g094130.1 | ATPase, V0 complex, subunit E | HC | chr5:4111...   112   1e-25

>Medtr5g094130.1 | ATPase, V0 complex, subunit E | HC |
           chr5:41112260-41115481 | 20130731
          Length = 70

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 60/70 (85%)

Query: 43  MGFPATTLIFAAIGIVASLCTVICFNRGSSSNLFHLTLVLTATICCWMMWAIVYLAQMKP 102
           MGF  T+LIF  IGI+A L T ICFN+G S+NLFHLTLVLT+TICCWMMWAIVYLAQM P
Sbjct: 1   MGFVVTSLIFLLIGIIACLSTRICFNKGPSANLFHLTLVLTSTICCWMMWAIVYLAQMNP 60

Query: 103 LIVPILSEAE 112
           LIVPILS+ E
Sbjct: 61  LIVPILSDGE 70