Miyakogusa Predicted Gene

Lj2g3v3224240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224240.1 Non Characterized Hit- tr|F1A2U8|F1A2U8_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,30.59,9e-18,SYNTAXIN 51,NULL; SYNTAXIN,NULL; Helical region found
in SNAREs,Target SNARE coiled-coil domain; seg,CUFF.40009.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g031190.1 | syntaxin of plants protein | HC | chr8:1166847...   355   3e-98
Medtr8g031190.2 | syntaxin of plants protein | HC | chr8:1166758...   355   3e-98
Medtr3g055200.1 | syntaxin of plants protein | HC | chr3:2169266...   353   1e-97
Medtr5g094010.3 | syntaxin of plants protein | HC | chr5:4106888...   215   3e-56
Medtr5g094010.4 | syntaxin of plants protein | HC | chr5:4106888...   215   3e-56
Medtr5g094010.2 | syntaxin of plants protein | HC | chr5:4106888...   215   3e-56
Medtr5g094010.1 | syntaxin of plants protein | HC | chr5:4106888...   215   3e-56
Medtr3g052210.1 | syntaxin protein | HC | chr3:20656015-20651601...    52   5e-07

>Medtr8g031190.1 | syntaxin of plants protein | HC |
           chr8:11668474-11663639 | 20130731
          Length = 229

 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 174/212 (82%), Positives = 191/212 (90%), Gaps = 4/212 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSWVKEYNEA+KLADDIS MISE +S   SGPE QRH+SAIRRKITILGTRLDSL
Sbjct: 1   MASSSDSWVKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDA 120
           QSLLSKLP      SEKE+NRRKD LA+LRS+VN+MASTL+M NF+NRDSL GPEIKPDA
Sbjct: 61  QSLLSKLPVK----SEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDA 116

Query: 121 MSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQ 180
           MSRT GLDN G++GLQRQ+MKEQDEGLEKLEE+V STKHIALAVNEEL LHT LIDDLD+
Sbjct: 117 MSRTVGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDE 176

Query: 181 HVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
           HVD+TDSRLRRVQKNLA+LNKRT GGCSC+CM
Sbjct: 177 HVDITDSRLRRVQKNLAILNKRTKGGCSCMCM 208


>Medtr8g031190.2 | syntaxin of plants protein | HC |
           chr8:11667585-11663639 | 20130731
          Length = 229

 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 174/212 (82%), Positives = 191/212 (90%), Gaps = 4/212 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSWVKEYNEA+KLADDIS MISE +S   SGPE QRH+SAIRRKITILGTRLDSL
Sbjct: 1   MASSSDSWVKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 60

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDA 120
           QSLLSKLP      SEKE+NRRKD LA+LRS+VN+MASTL+M NF+NRDSL GPEIKPDA
Sbjct: 61  QSLLSKLPVK----SEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDA 116

Query: 121 MSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQ 180
           MSRT GLDN G++GLQRQ+MKEQDEGLEKLEE+V STKHIALAVNEEL LHT LIDDLD+
Sbjct: 117 MSRTVGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDE 176

Query: 181 HVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
           HVD+TDSRLRRVQKNLA+LNKRT GGCSC+CM
Sbjct: 177 HVDITDSRLRRVQKNLAILNKRTKGGCSCMCM 208


>Medtr3g055200.1 | syntaxin of plants protein | HC |
           chr3:21692668-21694888 | 20130731
          Length = 261

 Score =  353 bits (905), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 174/212 (82%), Positives = 191/212 (90%), Gaps = 4/212 (1%)

Query: 1   MASSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSL 60
           MASSSDSW+KEYNEA+KLADDIS MISE +S   SGPE QRH+SAIRRKITILGTRLDSL
Sbjct: 33  MASSSDSWLKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSL 92

Query: 61  QSLLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDA 120
           QSLLSKLP      SEKE+NRRKD LA+LRS+VN+MASTL+M NF+NRDSL GPEIKPDA
Sbjct: 93  QSLLSKLPVK----SEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDA 148

Query: 121 MSRTNGLDNKGVIGLQRQIMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLIDDLDQ 180
           MSRT GLDN G++GLQRQ+MKEQDEGLEKLEE+V STKHIALAVNEEL LHT LIDDLD+
Sbjct: 149 MSRTVGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDE 208

Query: 181 HVDVTDSRLRRVQKNLAVLNKRTNGGCSCLCM 212
           HVDVTDSRLRRVQKNLA+LNKRT GGCSC+CM
Sbjct: 209 HVDVTDSRLRRVQKNLAILNKRTKGGCSCMCM 240


>Medtr5g094010.3 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 122/139 (87%), Gaps = 1/139 (0%)

Query: 3   SSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQS 62
           +SSD+WVKEYNEA KLA+DIS+M+SE SS   SGPEAQR SS+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMS 122
           LLSKLP GKQP+SEKE NRR DMLA+LRS+VN+MASTL+M NF+N+D L GPE+KPD MS
Sbjct: 62  LLSKLP-GKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMS 120

Query: 123 RTNGLDNKGVIGLQRQIMK 141
           RT GLDN G++G QRQIMK
Sbjct: 121 RTVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.4 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 122/139 (87%), Gaps = 1/139 (0%)

Query: 3   SSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQS 62
           +SSD+WVKEYNEA KLA+DIS+M+SE SS   SGPEAQR SS+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMS 122
           LLSKLP GKQP+SEKE NRR DMLA+LRS+VN+MASTL+M NF+N+D L GPE+KPD MS
Sbjct: 62  LLSKLP-GKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMS 120

Query: 123 RTNGLDNKGVIGLQRQIMK 141
           RT GLDN G++G QRQIMK
Sbjct: 121 RTVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.2 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 122/139 (87%), Gaps = 1/139 (0%)

Query: 3   SSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQS 62
           +SSD+WVKEYNEA KLA+DIS+M+SE SS   SGPEAQR SS+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMS 122
           LLSKLP GKQP+SEKE NRR DMLA+LRS+VN+MASTL+M NF+N+D L GPE+KPD MS
Sbjct: 62  LLSKLP-GKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMS 120

Query: 123 RTNGLDNKGVIGLQRQIMK 141
           RT GLDN G++G QRQIMK
Sbjct: 121 RTVGLDNNGLVGFQRQIMK 139


>Medtr5g094010.1 | syntaxin of plants protein | HC |
           chr5:41068885-41070942 | 20130731
          Length = 167

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 122/139 (87%), Gaps = 1/139 (0%)

Query: 3   SSSDSWVKEYNEAVKLADDISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQS 62
           +SSD+WVKEYNEA KLA+DIS+M+SE SS   SGPEAQR SS+ R+KITILGTRLDSLQS
Sbjct: 2   ASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQS 61

Query: 63  LLSKLPAGKQPVSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFGPEIKPDAMS 122
           LLSKLP GKQP+SEKE NRR DMLA+LRS+VN+MASTL+M NF+N+D L GPE+KPD MS
Sbjct: 62  LLSKLP-GKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMS 120

Query: 123 RTNGLDNKGVIGLQRQIMK 141
           RT GLDN G++G QRQIMK
Sbjct: 121 RTVGLDNNGLVGFQRQIMK 139


>Medtr3g052210.1 | syntaxin protein | HC | chr3:20656015-20651601 |
           20130731
          Length = 243

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 25/209 (11%)

Query: 22  ISTMISERSSSVESGPEAQRHSSAIRRKITILGTRLDSLQSLLSKLP--------AGKQP 73
           + + I E   ++ S  E  +H+S    K+ +    L   +S+  ++         A ++P
Sbjct: 11  VKSEIQESIDNLHSTFEQWKHTSDSAEKVRVTKEVLSGCESIEWQVDELEKAIAVAAREP 70

Query: 74  ----VSEKELNRRKDMLASLRSRVNEMASTLSMPNFSNRDSLFG--------PE-IKPDA 120
               + + E+  R+   +S R++V  M  T+     S+  S+ G        P+  +P A
Sbjct: 71  SWYGIDDAEIENRRRWTSSARTQVGTMKKTVDAGKSSSTTSINGMHRELMRLPDSYQPYA 130

Query: 121 MSRTNGLDNKGVIGLQ--RQ--IMKEQDEGLEKLEESVTSTKHIALAVNEELDLHTSLID 176
            ++    DN   I  +  RQ  ++K+QDE L++L  SV     + L ++EEL     +ID
Sbjct: 131 SNQNAANDNDDFIQSESDRQTLLIKQQDEELDELSLSVQRIGGVGLTIHEELLSQEKIID 190

Query: 177 DLDQHVDVTDSRLRRVQKNLAVLNKRTNG 205
           +L   +D T +RL  VQK +A++ K+ + 
Sbjct: 191 ELGNEMDSTSNRLDFVQKKVAMVMKKASA 219