Miyakogusa Predicted Gene

Lj2g3v3222880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3222880.1 tr|Q9LPT2|Q9LPT2_ARATH F11F12.6 protein
OS=Arabidopsis thaliana GN=F11F12.6 PE=4 SV=1,52.27,3e-17,PHD zinc
finger,Zinc finger, PHD-type; seg,NULL; FYVE/PHD zinc finger,Zinc
finger, FYVE/PHD-type; no,CUFF.39893.1
         (994 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093940.1 | PHD-finger protein | HC | chr5:41029626-410192...   750   0.0  
Medtr5g093940.3 | PHD-finger protein | HC | chr5:41029624-410192...   750   0.0  
Medtr5g093940.2 | PHD-finger protein | HC | chr5:41029624-410192...   739   0.0  

>Medtr5g093940.1 | PHD-finger protein | HC | chr5:41029626-41019219
           | 20130731
          Length = 829

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/536 (69%), Positives = 428/536 (79%), Gaps = 6/536 (1%)

Query: 26  ESEERCSKKPKLDEPNPNLDDGGAGGELKRIAEIVLVLSTMAAMRAGRKPTGVEVDLMRE 85
           + EER SKK K++E N N +      ELKR+AEIVLVLSTMA MR+G+KPT VEV+LMRE
Sbjct: 24  QQEERLSKKAKVEE-NENSE-----AELKRVAEIVLVLSTMATMRSGKKPTDVEVELMRE 77

Query: 86  ARTKLAHLCQGIAPKDIVASEAIGAVIEDLGFNAKFKDQRLGFRTPKMSIAERYSHAKWK 145
           ARTKLA LCQGIAPKDIV  EAIG+VI+DLG NAK  DQRLGFR PKMSIAE+Y  AK K
Sbjct: 78  ARTKLAVLCQGIAPKDIVGGEAIGSVIDDLGLNAKVVDQRLGFRVPKMSIAEKYLFAKSK 137

Query: 146 MEEAKKFSAPSTTYASQPLQTSIGGTVDNRVPTHTVRMIASDKSSHAAIPSTGTVMSIPP 205
           MEE+KK +APSTTY SQP QT+ GG VDNRVPT  VRM ASDKS+H ++PST ++ S+PP
Sbjct: 138 MEESKKCAAPSTTYTSQPFQTNTGGMVDNRVPTTAVRMFASDKSNHTSMPSTVSMASMPP 197

Query: 206 QVSVGSSAALQYQSTSNEVRPPVVPGVISSTHLGRNPSSVALPKVEHSQFKVGGGSNGPP 265
            ++ GSSA LQYQSTSNEVRPP+V GV+ S+H+GRNPSSVA+P+VE+ QFKV  G +G P
Sbjct: 198 HLAAGSSAPLQYQSTSNEVRPPIVSGVMPSSHMGRNPSSVAMPRVENPQFKVTAGLSGAP 257

Query: 266 YVLQVQANSSANQPLVNAPTWXXXXXXXXXXXXXXENKVPTLNSAKVEVAADVTISRAGP 325
           YVLQVQANS ANQ  VNAP+W              ENK P  NS KVE  AD T+SRAGP
Sbjct: 258 YVLQVQANSLANQSSVNAPSWSIQTQPVSLGRNVSENKAPAHNSVKVEGTADATVSRAGP 317

Query: 326 QITTDQSFRPFTTQTVPVNLSIMHQPLQGMNRVQAPVIPSHADIAKIVQKVLLPKLPDHP 385
           Q+T  Q+ RPF TQT P N+S MHQPLQG N V+ P+IPSH+DIAK+VQK+L+PKLPDHP
Sbjct: 318 QVTAAQNIRPFITQTGPGNMSAMHQPLQGGNMVRPPLIPSHSDIAKVVQKLLIPKLPDHP 377

Query: 386 TWTPPSRDYMNKGLTCQICEVTVNEVDTVLLCDACEKGFHLKCLPPSVLRGIHNRVDWYC 445
           TWTPPSRDYM+K  TCQ CE+TV+EVD+VLLCDACEKGFHLKCL PSV+RGIHNRVDW+C
Sbjct: 378 TWTPPSRDYMSKNFTCQTCELTVSEVDSVLLCDACEKGFHLKCLQPSVIRGIHNRVDWHC 437

Query: 446 MKCLGLSGGKPLPPKYGRVMRSSNTPPKLPSNTDTIQPSSEKEAGSIDPQVSQQLLTTNG 505
           MKCLGLSGGKPLPPKYGRVMRSS T P  PSN+  IQPSSEK+  ++DP+VS Q+LTTNG
Sbjct: 438 MKCLGLSGGKPLPPKYGRVMRSSITSPSFPSNSAGIQPSSEKKPDNLDPKVSPQMLTTNG 497

Query: 506 SSVQAVSSGNHSVEPSADSKTPDMNDIQVTNISSSIETIGEKSDPNFSMKSLSASA 561
           +SV   SS NH+ EPS DS TPD  DIQ +NISSSIETI EK DPN  +KS + SA
Sbjct: 498 NSVPTDSSTNHNTEPSFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAYSA 553



 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/319 (68%), Positives = 241/319 (75%), Gaps = 3/319 (0%)

Query: 677 SADSKAPDMSDIQVTNISSSIETIGEKSDXXXXXXXXXXXXXXXTGLQSES-SQQINSKA 735
           S DS  PD  DIQ +NISSSIETI EK D               TG+Q E  ++QI+SKA
Sbjct: 513 SFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAYSAS--TGVQGEGYAEQIDSKA 570

Query: 736 LICKETSESETLPILSEPAKCENLQPSQDFQVEQTESQDNAEVSSDKHVNSTCMTREQKE 795
           L CK+TSESETLP +SE AK  NLQ S   QVE   SQDNAE+SSD+H +S+ +   QKE
Sbjct: 571 LTCKDTSESETLPNISELAKSGNLQSSPGSQVENAVSQDNAEISSDRHDSSSFIISNQKE 630

Query: 796 SHGGENLTYDSKPDDLDVAQANFIGGSETIAEGRQHSALSSDSSHAVEWIGDVLQVVDEK 855
           SH GE+ TYD K DDLD AQ N + GS T  EG QH ALSSDSSHAVEWIGDV+Q+VDEK
Sbjct: 631 SHEGESTTYDIKRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDEK 690

Query: 856 KFYQSCSVNGITYRLQDHALFPSSHGKLTPSKIQSMWEDCKTGLNWVKVTNCYFPDNLPG 915
           K YQSC ++G+TYRLQ HA F SSHGKLTPSK+QSMWED KTG+ WVKVT CYFPD+LPG
Sbjct: 691 KHYQSCCIDGVTYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLPG 750

Query: 916 NISHPCISEVNEVYESNSDRTEMLGSIQGPCEVLPSDKFKQENDRRCQLENEPSARVQPI 975
           NI HPCISEVNEVYESNSDR EM  SI+GPC VLP DKFKQENDRRCQ   E SA VQPI
Sbjct: 751 NIGHPCISEVNEVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQPI 810

Query: 976 FLCRWFYDEIKSFFQPVTS 994
           FLCRWFYDEIK  FQPV S
Sbjct: 811 FLCRWFYDEIKKSFQPVIS 829


>Medtr5g093940.3 | PHD-finger protein | HC | chr5:41029624-41019219
           | 20130731
          Length = 829

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/536 (69%), Positives = 428/536 (79%), Gaps = 6/536 (1%)

Query: 26  ESEERCSKKPKLDEPNPNLDDGGAGGELKRIAEIVLVLSTMAAMRAGRKPTGVEVDLMRE 85
           + EER SKK K++E N N +      ELKR+AEIVLVLSTMA MR+G+KPT VEV+LMRE
Sbjct: 24  QQEERLSKKAKVEE-NENSE-----AELKRVAEIVLVLSTMATMRSGKKPTDVEVELMRE 77

Query: 86  ARTKLAHLCQGIAPKDIVASEAIGAVIEDLGFNAKFKDQRLGFRTPKMSIAERYSHAKWK 145
           ARTKLA LCQGIAPKDIV  EAIG+VI+DLG NAK  DQRLGFR PKMSIAE+Y  AK K
Sbjct: 78  ARTKLAVLCQGIAPKDIVGGEAIGSVIDDLGLNAKVVDQRLGFRVPKMSIAEKYLFAKSK 137

Query: 146 MEEAKKFSAPSTTYASQPLQTSIGGTVDNRVPTHTVRMIASDKSSHAAIPSTGTVMSIPP 205
           MEE+KK +APSTTY SQP QT+ GG VDNRVPT  VRM ASDKS+H ++PST ++ S+PP
Sbjct: 138 MEESKKCAAPSTTYTSQPFQTNTGGMVDNRVPTTAVRMFASDKSNHTSMPSTVSMASMPP 197

Query: 206 QVSVGSSAALQYQSTSNEVRPPVVPGVISSTHLGRNPSSVALPKVEHSQFKVGGGSNGPP 265
            ++ GSSA LQYQSTSNEVRPP+V GV+ S+H+GRNPSSVA+P+VE+ QFKV  G +G P
Sbjct: 198 HLAAGSSAPLQYQSTSNEVRPPIVSGVMPSSHMGRNPSSVAMPRVENPQFKVTAGLSGAP 257

Query: 266 YVLQVQANSSANQPLVNAPTWXXXXXXXXXXXXXXENKVPTLNSAKVEVAADVTISRAGP 325
           YVLQVQANS ANQ  VNAP+W              ENK P  NS KVE  AD T+SRAGP
Sbjct: 258 YVLQVQANSLANQSSVNAPSWSIQTQPVSLGRNVSENKAPAHNSVKVEGTADATVSRAGP 317

Query: 326 QITTDQSFRPFTTQTVPVNLSIMHQPLQGMNRVQAPVIPSHADIAKIVQKVLLPKLPDHP 385
           Q+T  Q+ RPF TQT P N+S MHQPLQG N V+ P+IPSH+DIAK+VQK+L+PKLPDHP
Sbjct: 318 QVTAAQNIRPFITQTGPGNMSAMHQPLQGGNMVRPPLIPSHSDIAKVVQKLLIPKLPDHP 377

Query: 386 TWTPPSRDYMNKGLTCQICEVTVNEVDTVLLCDACEKGFHLKCLPPSVLRGIHNRVDWYC 445
           TWTPPSRDYM+K  TCQ CE+TV+EVD+VLLCDACEKGFHLKCL PSV+RGIHNRVDW+C
Sbjct: 378 TWTPPSRDYMSKNFTCQTCELTVSEVDSVLLCDACEKGFHLKCLQPSVIRGIHNRVDWHC 437

Query: 446 MKCLGLSGGKPLPPKYGRVMRSSNTPPKLPSNTDTIQPSSEKEAGSIDPQVSQQLLTTNG 505
           MKCLGLSGGKPLPPKYGRVMRSS T P  PSN+  IQPSSEK+  ++DP+VS Q+LTTNG
Sbjct: 438 MKCLGLSGGKPLPPKYGRVMRSSITSPSFPSNSAGIQPSSEKKPDNLDPKVSPQMLTTNG 497

Query: 506 SSVQAVSSGNHSVEPSADSKTPDMNDIQVTNISSSIETIGEKSDPNFSMKSLSASA 561
           +SV   SS NH+ EPS DS TPD  DIQ +NISSSIETI EK DPN  +KS + SA
Sbjct: 498 NSVPTDSSTNHNTEPSFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAYSA 553



 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/319 (68%), Positives = 241/319 (75%), Gaps = 3/319 (0%)

Query: 677 SADSKAPDMSDIQVTNISSSIETIGEKSDXXXXXXXXXXXXXXXTGLQSES-SQQINSKA 735
           S DS  PD  DIQ +NISSSIETI EK D               TG+Q E  ++QI+SKA
Sbjct: 513 SFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAYSAS--TGVQGEGYAEQIDSKA 570

Query: 736 LICKETSESETLPILSEPAKCENLQPSQDFQVEQTESQDNAEVSSDKHVNSTCMTREQKE 795
           L CK+TSESETLP +SE AK  NLQ S   QVE   SQDNAE+SSD+H +S+ +   QKE
Sbjct: 571 LTCKDTSESETLPNISELAKSGNLQSSPGSQVENAVSQDNAEISSDRHDSSSFIISNQKE 630

Query: 796 SHGGENLTYDSKPDDLDVAQANFIGGSETIAEGRQHSALSSDSSHAVEWIGDVLQVVDEK 855
           SH GE+ TYD K DDLD AQ N + GS T  EG QH ALSSDSSHAVEWIGDV+Q+VDEK
Sbjct: 631 SHEGESTTYDIKRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDEK 690

Query: 856 KFYQSCSVNGITYRLQDHALFPSSHGKLTPSKIQSMWEDCKTGLNWVKVTNCYFPDNLPG 915
           K YQSC ++G+TYRLQ HA F SSHGKLTPSK+QSMWED KTG+ WVKVT CYFPD+LPG
Sbjct: 691 KHYQSCCIDGVTYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLPG 750

Query: 916 NISHPCISEVNEVYESNSDRTEMLGSIQGPCEVLPSDKFKQENDRRCQLENEPSARVQPI 975
           NI HPCISEVNEVYESNSDR EM  SI+GPC VLP DKFKQENDRRCQ   E SA VQPI
Sbjct: 751 NIGHPCISEVNEVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQPI 810

Query: 976 FLCRWFYDEIKSFFQPVTS 994
           FLCRWFYDEIK  FQPV S
Sbjct: 811 FLCRWFYDEIKKSFQPVIS 829


>Medtr5g093940.2 | PHD-finger protein | HC | chr5:41029624-41019219
           | 20130731
          Length = 846

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/553 (66%), Positives = 428/553 (77%), Gaps = 23/553 (4%)

Query: 26  ESEERCSKKPKLDEPNPNLDDGGAGGELKRIAEIVLVLSTMAAMRAGRKPTGVEVDLMRE 85
           + EER SKK K++E N N +      ELKR+AEIVLVLSTMA MR+G+KPT VEV+LMRE
Sbjct: 24  QQEERLSKKAKVEE-NENSE-----AELKRVAEIVLVLSTMATMRSGKKPTDVEVELMRE 77

Query: 86  ARTKLAHLCQGIAPKDIVASEAIGAVIEDLGFNAKFKDQRLGFRTPKMSIAERYSHAKWK 145
           ARTKLA LCQGIAPKDIV  EAIG+VI+DLG NAK  DQRLGFR PKMSIAE+Y  AK K
Sbjct: 78  ARTKLAVLCQGIAPKDIVGGEAIGSVIDDLGLNAKVVDQRLGFRVPKMSIAEKYLFAKSK 137

Query: 146 MEEAKKFSAPSTTYASQPLQTSIGGTVDNRVPTHTVRMIASDKSSHAAIPSTGTVMSIPP 205
           MEE+KK +APSTTY SQP QT+ GG VDNRVPT  VRM ASDKS+H ++PST ++ S+PP
Sbjct: 138 MEESKKCAAPSTTYTSQPFQTNTGGMVDNRVPTTAVRMFASDKSNHTSMPSTVSMASMPP 197

Query: 206 QVSVGSSAALQYQSTSNEVRPPVVPGVISSTHLGRNPSSVALPKVEHSQFKVGGGSNGPP 265
            ++ GSSA LQYQSTSNEVRPP+V GV+ S+H+GRNPSSVA+P+VE+ QFKV  G +G P
Sbjct: 198 HLAAGSSAPLQYQSTSNEVRPPIVSGVMPSSHMGRNPSSVAMPRVENPQFKVTAGLSGAP 257

Query: 266 YVLQVQ-----------------ANSSANQPLVNAPTWXXXXXXXXXXXXXXENKVPTLN 308
           YVLQVQ                 ANS ANQ  VNAP+W              ENK P  N
Sbjct: 258 YVLQVQGNFHQASHQSHIPRGGRANSLANQSSVNAPSWSIQTQPVSLGRNVSENKAPAHN 317

Query: 309 SAKVEVAADVTISRAGPQITTDQSFRPFTTQTVPVNLSIMHQPLQGMNRVQAPVIPSHAD 368
           S KVE  AD T+SRAGPQ+T  Q+ RPF TQT P N+S MHQPLQG N V+ P+IPSH+D
Sbjct: 318 SVKVEGTADATVSRAGPQVTAAQNIRPFITQTGPGNMSAMHQPLQGGNMVRPPLIPSHSD 377

Query: 369 IAKIVQKVLLPKLPDHPTWTPPSRDYMNKGLTCQICEVTVNEVDTVLLCDACEKGFHLKC 428
           IAK+VQK+L+PKLPDHPTWTPPSRDYM+K  TCQ CE+TV+EVD+VLLCDACEKGFHLKC
Sbjct: 378 IAKVVQKLLIPKLPDHPTWTPPSRDYMSKNFTCQTCELTVSEVDSVLLCDACEKGFHLKC 437

Query: 429 LPPSVLRGIHNRVDWYCMKCLGLSGGKPLPPKYGRVMRSSNTPPKLPSNTDTIQPSSEKE 488
           L PSV+RGIHNRVDW+CMKCLGLSGGKPLPPKYGRVMRSS T P  PSN+  IQPSSEK+
Sbjct: 438 LQPSVIRGIHNRVDWHCMKCLGLSGGKPLPPKYGRVMRSSITSPSFPSNSAGIQPSSEKK 497

Query: 489 AGSIDPQVSQQLLTTNGSSVQAVSSGNHSVEPSADSKTPDMNDIQVTNISSSIETIGEKS 548
             ++DP+VS Q+LTTNG+SV   SS NH+ EPS DS TPD  DIQ +NISSSIETI EK 
Sbjct: 498 PDNLDPKVSPQMLTTNGNSVPTDSSTNHNTEPSFDSNTPDTRDIQGSNISSSIETIDEKP 557

Query: 549 DPNFSMKSLSASA 561
           DPN  +KS + SA
Sbjct: 558 DPNICVKSAAYSA 570



 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/319 (68%), Positives = 241/319 (75%), Gaps = 3/319 (0%)

Query: 677 SADSKAPDMSDIQVTNISSSIETIGEKSDXXXXXXXXXXXXXXXTGLQSES-SQQINSKA 735
           S DS  PD  DIQ +NISSSIETI EK D               TG+Q E  ++QI+SKA
Sbjct: 530 SFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAYSAS--TGVQGEGYAEQIDSKA 587

Query: 736 LICKETSESETLPILSEPAKCENLQPSQDFQVEQTESQDNAEVSSDKHVNSTCMTREQKE 795
           L CK+TSESETLP +SE AK  NLQ S   QVE   SQDNAE+SSD+H +S+ +   QKE
Sbjct: 588 LTCKDTSESETLPNISELAKSGNLQSSPGSQVENAVSQDNAEISSDRHDSSSFIISNQKE 647

Query: 796 SHGGENLTYDSKPDDLDVAQANFIGGSETIAEGRQHSALSSDSSHAVEWIGDVLQVVDEK 855
           SH GE+ TYD K DDLD AQ N + GS T  EG QH ALSSDSSHAVEWIGDV+Q+VDEK
Sbjct: 648 SHEGESTTYDIKRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDEK 707

Query: 856 KFYQSCSVNGITYRLQDHALFPSSHGKLTPSKIQSMWEDCKTGLNWVKVTNCYFPDNLPG 915
           K YQSC ++G+TYRLQ HA F SSHGKLTPSK+QSMWED KTG+ WVKVT CYFPD+LPG
Sbjct: 708 KHYQSCCIDGVTYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLPG 767

Query: 916 NISHPCISEVNEVYESNSDRTEMLGSIQGPCEVLPSDKFKQENDRRCQLENEPSARVQPI 975
           NI HPCISEVNEVYESNSDR EM  SI+GPC VLP DKFKQENDRRCQ   E SA VQPI
Sbjct: 768 NIGHPCISEVNEVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQPI 827

Query: 976 FLCRWFYDEIKSFFQPVTS 994
           FLCRWFYDEIK  FQPV S
Sbjct: 828 FLCRWFYDEIKKSFQPVIS 846