Miyakogusa Predicted Gene

Lj2g3v3210780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3210780.1 tr|A4RSJ3|A4RSJ3_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901) GN=Z PE=4
SV=1,29.75,8e-18,no description,Trigger factor, ribosome-binding,
bacterial; seg,NULL; Trigger factor ribosome-bindin,CUFF.39890.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093830.1 | trigger factor-like protein | HC | chr5:409621...   312   3e-85

>Medtr5g093830.1 | trigger factor-like protein | HC |
           chr5:40962135-40967479 | 20130731
          Length = 561

 Score =  312 bits (799), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 164/265 (61%), Positives = 187/265 (70%), Gaps = 18/265 (6%)

Query: 3   MELCTQTFTRVX--------XXXXXXXXXXXXXXXRANTSTRPFKSNSFKLSSLTPHIHL 54
           MELCT+TFT                           +NT+ +PFK   F LSS       
Sbjct: 24  MELCTRTFTTTSLPFNPSFSLPSSSSSSSSISLHLHSNTTLKPFK---FNLSS-----SF 75

Query: 55  FQPFIHHHXXXXXXXXXXXXXXXXX--EKDRLPADLIVTETEESNSRVRLHVEVPPLVCE 112
            QP ++HH                   E DRLPA L VTET+ESNSRV LHVEVP LVCE
Sbjct: 76  IQPSLYHHTSSPFTVSASSSSSVELFPENDRLPAQLKVTETKESNSRVTLHVEVPSLVCE 135

Query: 113 DCYNTVIAEFTKQAKIPGFRPGKKVPESILISYVGKKNVQGATIESILKRTLSHAMESVT 172
           DCY  V+ EFTK AK+PGFRPGKK+PESIL+ YVG KNVQ ATIESIL+RTLSHA+ +VT
Sbjct: 136 DCYERVLVEFTKFAKVPGFRPGKKIPESILVGYVGSKNVQKATIESILRRTLSHAVTAVT 195

Query: 173 GRALQDSVRIVTKFSDMEETYSSLGFLRYDVIVDVAPEIKWISDNAYKNLKIVVELDSDI 232
           GRALQDS+RIVTKFSDME+TYSSLG+LRYDV VDVAPEIKWISD+AYKNLK+VVE+D++I
Sbjct: 196 GRALQDSIRIVTKFSDMEDTYSSLGYLRYDVSVDVAPEIKWISDDAYKNLKVVVEIDNEI 255

Query: 233 DAHKASEQVFRRRYKSTGALKVVTD 257
           DAH ASE+ FRRRYKS G LKVVTD
Sbjct: 256 DAHIASEKEFRRRYKSAGVLKVVTD 280