Miyakogusa Predicted Gene

Lj2g3v3188380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3188380.1 Non Characterized Hit- tr|D7MKV0|D7MKV0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,28.87,0.000000000003,Ribonuclease III family,Ribonuclease III
domain; Double-stranded RNA binding motif,Double-stranded
R,CUFF.39849.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g058930.1 | ribonuclease III domain protein | HC | chr8:20...   425   e-119
Medtr3g096700.1 | ribonuclease III domain protein | HC | chr3:44...   402   e-112
Medtr3g079980.1 | ribonuclease III domain protein | LC | chr3:36...   170   2e-42
Medtr7g118350.2 | endoribonuclease dicer-like protein | HC | chr...   166   4e-41
Medtr7g118350.1 | endoribonuclease dicer-like protein | HC | chr...   166   4e-41
Medtr3g080000.1 | ribonuclease 3-like protein | HC | chr3:361608...   161   9e-40
Medtr3g079860.1 | ribonuclease III domain protein | LC | chr3:36...   158   7e-39
Medtr3g105390.1 | endoribonuclease dicer-like protein | HC | chr...   127   1e-29
Medtr2g030490.1 | endoribonuclease dicer-like protein | HC | chr...   125   4e-29
Medtr1g060740.1 | endoribonuclease dicer-like protein | HC | chr...   125   5e-29
Medtr4g116860.1 | endoribonuclease dicer-like protein | HC | chr...   110   2e-24
Medtr3g080020.1 | ribonuclease 3-like protein | HC | chr3:361739...    70   4e-12
Medtr8g069975.1 | endoribonuclease dicer-like protein | HC | chr...    68   1e-11
Medtr3g080010.1 | double-stranded RNA-binding motif protein | LC...    65   1e-10
Medtr6g071535.1 | double-stranded RNA-binding motif protein | LC...    54   2e-07
Medtr2g039820.1 | ribonuclease III domain protein | LC | chr2:17...    49   6e-06

>Medtr8g058930.1 | ribonuclease III domain protein | HC |
           chr8:20473610-20470150 | 20130731
          Length = 344

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/341 (60%), Positives = 261/341 (76%), Gaps = 3/341 (0%)

Query: 1   MEAAVVAVENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLAN 60
           MEA+V AVE I+ Y+F NKKLLE+ALTH+S+  + SYERLEF+GD +LGLAISN+++L+ 
Sbjct: 5   MEASVAAVEKIIGYTFLNKKLLEDALTHTSYPESVSYERLEFVGDAVLGLAISNHIFLSY 64

Query: 61  PSLDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGED--RT 118
            S+D GQLSLLRAANVSTEKLAR A+  G++R+VRHN+V +V K+ EF  A+  E     
Sbjct: 65  TSVDAGQLSLLRAANVSTEKLARAAVNHGLHRYVRHNTVNIVHKISEFADAVEREKDCAV 124

Query: 119 VCYGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVT 178
           V YGG VKAPK+LAD+VES+AAAVY+D+ FDL+ LWVI+RGLLEPIVTLDDLE  PQPVT
Sbjct: 125 VLYGGSVKAPKILADVVESIAAAVYVDVDFDLKKLWVILRGLLEPIVTLDDLERKPQPVT 184

Query: 179 MLFEICQKNGKQVDIKYWRDSDKSIAGVFVDGQIVASASSDQKDIXXXXXXXXXXXXXXX 238
            L+EICQKNG++V+I+  R+  KS A V+VDG++VA+A SDQKDI               
Sbjct: 185 TLYEICQKNGRKVEIRQSRNGAKSTASVYVDGELVATACSDQKDIARLDAAQIAVHELER 244

Query: 239 XXPSSTMTFDFCASIDGTFEIDVAKHRLHELCVMKKWSKPVYSIRKDEGPPHEKIYLCSV 298
             P++TM  D C  +DGTFEI+ AK +L+ +C  KKW KPVYSI KDEG P +KI++ SV
Sbjct: 245 VLPATTMMSDRCKGLDGTFEIEAAKQQLYAICGTKKWPKPVYSIEKDEGTPQKKIFVTSV 304

Query: 299 QIPTTPHGPLQMFGEEKSRLKDAENSAASFMIRALQERNFI 339
           QI  TP G L+M G+EKSRLKDA+NSAAS MIRALQ+  ++
Sbjct: 305 QI-ATPDGILKMLGDEKSRLKDAQNSAASLMIRALQQGQYV 344


>Medtr3g096700.1 | ribonuclease III domain protein | HC |
           chr3:44257088-44253252 | 20130731
          Length = 344

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/341 (58%), Positives = 249/341 (73%), Gaps = 3/341 (0%)

Query: 1   MEAAVVAVENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLAN 60
           ME +V AVE I+ Y+F+NK LLEEALTHSS+  + SYERLEFIGD +LG AISN+L+L  
Sbjct: 5   MEDSVAAVEKIIGYTFRNKNLLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVY 64

Query: 61  PSLDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGED--RT 118
            ++D  QLSLLR+ANVSTEKLAR A+ + ++R++R  +  L + +REF  A+  E     
Sbjct: 65  TNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAI 124

Query: 119 VCYGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVT 178
           V YGG VKAPKVLAD+VESVAAAVY+DL FDL+ LWV+IRGLLEPIVTL+DLE  PQPVT
Sbjct: 125 VLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVT 184

Query: 179 MLFEICQKNGKQVDIKYWRDSDKSIAGVFVDGQIVASASSDQKDIXXXXXXXXXXXXXXX 238
           ML+EIC KNGK+VDI++ R+ DKS A V+VDG++ A ASSDQKDI               
Sbjct: 185 MLYEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKLER 244

Query: 239 XXPSSTMTFDFCASIDGTFEIDVAKHRLHELCVMKKWSKPVYSIRKDEGPPHEKIYLCSV 298
             P +T T D C  +DGTFEI+  K +L+ LC  KKW  PVYSI +DEG P  KI++ SV
Sbjct: 245 VLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVTSV 304

Query: 299 QIPTTPHGPLQMFGEEKSRLKDAENSAASFMIRALQERNFI 339
           Q+  TP G L+M GEEKSR+KD++NSAAS MIRAL +   +
Sbjct: 305 QV-ATPDGTLKMLGEEKSRVKDSQNSAASLMIRALLQGQLV 344


>Medtr3g079980.1 | ribonuclease III domain protein | LC |
           chr3:36149988-36146306 | 20130731
          Length = 565

 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 127/195 (65%), Gaps = 7/195 (3%)

Query: 8   VENILRYSFKNKKLLEEALTHSSFTGAT--SYERLEFIGDPILGLAISNYLYLANPSLDP 65
           VE IL Y FKNK LLEEA TH ++      SYERLE++GD +L L I+   + A P+L P
Sbjct: 230 VEAILEYEFKNKLLLEEAFTHGTYGAENGLSYERLEYVGDSVLNLMITKEQFQAYPTLAP 289

Query: 66  GQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCYGGIV 125
           G L+ LRAANV TEKLARVAI+ G++R++RH    L D+++EF   IA  +  +   G++
Sbjct: 290 GHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKGIA--EYPLHSNGLI 347

Query: 126 KAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTMLFEICQ 185
             PK LADIVES   A+++D G  ++ +W + + LLEPI+  + ++ +  PVT L E+CQ
Sbjct: 348 DVPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRH--PVTELHEVCQ 405

Query: 186 KNGKQVDIK-YWRDS 199
           K   ++  +  W+++
Sbjct: 406 KKSLKLQFRDLWKET 420


>Medtr7g118350.2 | endoribonuclease dicer-like protein | HC |
            chr7:49139858-49129556 | 20130731
          Length = 1841

 Score =  166 bits (419), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 16/334 (4%)

Query: 7    AVENILRYSFKNKKLLEEALTHSS--FTGATSYERLEFIGDPILGLAISNYLYLANPSLD 64
            A+E  L   FK+K LL E++TH+S   +G + Y+RLEF+GD +L   I+ +L+ +   L 
Sbjct: 1505 ALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFSYTDLP 1564

Query: 65   PGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCYG-- 122
            PG+L+ LRAA V+ E  ARV ++  ++ H+RH S  L  ++++FV  +  E     +   
Sbjct: 1565 PGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKEVQDELSKPGFNSF 1624

Query: 123  --GIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTML 180
              G  KAPKVL DI+ES+A A+++D G +   +W + + LL P+VT + L  +  PV  L
Sbjct: 1625 GLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVTPETLPMH--PVREL 1682

Query: 181  FEICQKNGKQVDIKYWRDSDKSIAGVFVDGQIVASASSDQKDIXXXXXXXXXXXXXXXXX 240
             E CQ+  + ++ +  R  + +   VF+DG  V +A + QK +                 
Sbjct: 1683 QERCQQQAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKE 1742

Query: 241  PSSTM-TFDFCASIDG--TFEIDVAKHRLHELCVMKKWSKPVYSIRKDEGPPHEKIYLCS 297
             S      D   + +G  TF     +  L+++C+ + W  P Y    + GP H K +  +
Sbjct: 1743 ESKIQEKNDEKETKNGNQTF----TRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFA 1798

Query: 298  VQIPTTPHGPL-QMFGEEKSRLKDAENSAASFMI 330
            V++ TT  G   +  GE    +K A++SAA  ++
Sbjct: 1799 VRVNTTDKGWTDECVGEAMPSVKKAKDSAAVLLL 1832



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)

Query: 6    VAVENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLANPSLDP 65
            V ++N++ Y  +  K+LE ALT +S      YER E +GD  L   +S +L+L +P    
Sbjct: 1286 VQLKNMINYPVQASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHE 1344

Query: 66   GQLSLLRAANVSTEKLARVAIRSGIYRHV 94
            GQL+ +R   VS   L R A+  G+  ++
Sbjct: 1345 GQLTRMRQQMVSNMVLYRYALSKGLQSYI 1373


>Medtr7g118350.1 | endoribonuclease dicer-like protein | HC |
            chr7:49139858-49129556 | 20130731
          Length = 1880

 Score =  166 bits (419), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 16/334 (4%)

Query: 7    AVENILRYSFKNKKLLEEALTHSS--FTGATSYERLEFIGDPILGLAISNYLYLANPSLD 64
            A+E  L   FK+K LL E++TH+S   +G + Y+RLEF+GD +L   I+ +L+ +   L 
Sbjct: 1544 ALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFSYTDLP 1603

Query: 65   PGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCYG-- 122
            PG+L+ LRAA V+ E  ARV ++  ++ H+RH S  L  ++++FV  +  E     +   
Sbjct: 1604 PGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKEVQDELSKPGFNSF 1663

Query: 123  --GIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTML 180
              G  KAPKVL DI+ES+A A+++D G +   +W + + LL P+VT + L  +  PV  L
Sbjct: 1664 GLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVTPETLPMH--PVREL 1721

Query: 181  FEICQKNGKQVDIKYWRDSDKSIAGVFVDGQIVASASSDQKDIXXXXXXXXXXXXXXXXX 240
             E CQ+  + ++ +  R  + +   VF+DG  V +A + QK +                 
Sbjct: 1722 QERCQQQAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKE 1781

Query: 241  PSSTM-TFDFCASIDG--TFEIDVAKHRLHELCVMKKWSKPVYSIRKDEGPPHEKIYLCS 297
             S      D   + +G  TF     +  L+++C+ + W  P Y    + GP H K +  +
Sbjct: 1782 ESKIQEKNDEKETKNGNQTF----TRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFA 1837

Query: 298  VQIPTTPHGPL-QMFGEEKSRLKDAENSAASFMI 330
            V++ TT  G   +  GE    +K A++SAA  ++
Sbjct: 1838 VRVNTTDKGWTDECVGEAMPSVKKAKDSAAVLLL 1871



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)

Query: 6    VAVENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLANPSLDP 65
            V ++N++ Y  +  K+LE ALT +S      YER E +GD  L   +S +L+L +P    
Sbjct: 1325 VQLKNMINYPVQASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHE 1383

Query: 66   GQLSLLRAANVSTEKLARVAIRSGIYRHV 94
            GQL+ +R   VS   L R A+  G+  ++
Sbjct: 1384 GQLTRMRQQMVSNMVLYRYALSKGLQSYI 1412


>Medtr3g080000.1 | ribonuclease 3-like protein | HC |
           chr3:36160813-36156170 | 20130731
          Length = 313

 Score =  161 bits (407), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 8/218 (3%)

Query: 8   VENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLANPSLDPGQ 67
           VE IL Y FKNK+LLEEALTH+++     YERLE++GD +L L ++   +++ P+L PG 
Sbjct: 72  VEEILGYEFKNKQLLEEALTHTTYGAENDYERLEYVGDAVLNLLMAREQFVSYPNLKPGI 131

Query: 68  LSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCYGGIVKA 127
           L+ LR+ NV +EKLARVAI  G+ R++RH    L +++  F  AI  ED  +   G +  
Sbjct: 132 LTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQIEAFTKAI--EDYPIHSNGHIHV 189

Query: 128 PKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTMLFEICQKN 187
           PK LAD+VES   A++ID    L+ +W + R LLEPI+  + +E    PV+ L E+CQK 
Sbjct: 190 PKDLADMVESTIGALFIDCDSSLEIVWKVFRKLLEPIIEPNTVE--KHPVSELQEVCQK- 246

Query: 188 GKQVDIKYWRDSDKSIA-GVFVDGQIVASAS-SDQKDI 223
            K++++++    +KS+   VF++ + V   +   +KDI
Sbjct: 247 -KKLNLQFVDLWEKSMNIDVFINEKFVGRGTYGSKKDI 283


>Medtr3g079860.1 | ribonuclease III domain protein | LC |
           chr3:36083908-36074928 | 20130731
          Length = 505

 Score =  158 bits (399), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 9/217 (4%)

Query: 8   VENILRYSFKNKKLLEEALTHSSFTGAT--SYERLEFIGDPILGLAISNYLYLANPSLDP 65
           VE IL Y FKN  LLEEA TH ++      SYERLE+IGD +L L I+   + A P+L P
Sbjct: 169 VEAILEYEFKNILLLEEAFTHCTYGAENGLSYERLEYIGDSVLNLMITTEQFHAYPTLAP 228

Query: 66  GQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCYGGIV 125
           G L+ LRAANV TEKLARVAI+ G++R+VRH    L D+++ F+  +   +  +   G++
Sbjct: 229 GHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQAFIKEVV--EYPLHSNGLI 286

Query: 126 KAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTMLFEICQ 185
             PK+LADIVES   A+++D G  ++ +W   + LL P++    ++ +P     L E CQ
Sbjct: 287 DVPKILADIVESTIGAIFVDCGSSIETVWKFFKKLLVPVIDPHTIQRHPS--AELNEFCQ 344

Query: 186 KNGKQVDIK-YWRDSDKSIAGVFVDGQIVASASSDQK 221
           K G ++  +  W+ S+  I  V +  ++V S     K
Sbjct: 345 KRGLKLQFRDLWKVSE--IVEVLISEELVGSGKCGSK 379


>Medtr3g105390.1 | endoribonuclease dicer-like protein | HC |
            chr3:48587251-48600607 | 20130731
          Length = 1730

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 7/212 (3%)

Query: 5    VVAVENILRYSFKNKKLLEEALTH---SSFTGATSYERLEFIGDPILGLAISNYLYLANP 61
            + ++E  + Y F  K LL EA TH   S       YERLEF+GD +L L I+ +L+ ++ 
Sbjct: 1293 IASLEAKIGYEFSVKGLLVEATTHLSESEHGTGCCYERLEFLGDSVLDLLITWHLFQSHT 1352

Query: 62   SLDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAG-EDRTVC 120
             +DPG+L+ LR+A+V+ E  A+ A+R  +++H+ H+S  L  ++ E+   I+  ED  V 
Sbjct: 1353 EIDPGELTDLRSASVNNENFAQAAVRRNLHQHLLHSSGLLQSQILEYAKVISEPEDNAVP 1412

Query: 121  YGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTML 180
              GI KAPK L D+VES+A A+ ID   DL  +W +   LL PIVT + LE    P+  L
Sbjct: 1413 LQGI-KAPKALGDLVESIAGAILIDTKLDLDQVWKVFNPLLSPIVTPEKLEL--PPLREL 1469

Query: 181  FEICQKNGKQVDIKYWRDSDKSIAGVFVDGQI 212
             ++    G  V +K   D   ++  V +  Q+
Sbjct: 1470 MQLSDSLGYFVKVKVSHDKKGTMEHVEIRVQL 1501


>Medtr2g030490.1 | endoribonuclease dicer-like protein | HC |
            chr2:11495894-11486899 | 20130731
          Length = 1377

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 116/187 (62%), Gaps = 14/187 (7%)

Query: 8    VENILRYSFKNKKLLEEALTHSSFT---GATSYERLEFIGDPILGLAISNYLYLANPSLD 64
            +E++L+YSF+++ LL EALTH S+        Y+RLE++GD +L   I+ +LY   P + 
Sbjct: 1140 LESLLKYSFRDRSLLVEALTHGSYMLPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMS 1199

Query: 65   PGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIA---GEDRTVCY 121
            PGQL+ +R+A+V+ +  A  AI+  +++HV H S     ++ + +VA      +  +  +
Sbjct: 1200 PGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHAS----QELHKHIVATLDKFDDQSSSSF 1255

Query: 122  GGIVKA--PKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTM 179
            G   +A  PKVL DI+ES+A A+++D G+D + +W  IR LLEP+VT D L     P+  
Sbjct: 1256 GWESEATFPKVLGDIIESLAGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTL--TIHPIRE 1313

Query: 180  LFEICQK 186
            L E+CQK
Sbjct: 1314 LNELCQK 1320


>Medtr1g060740.1 | endoribonuclease dicer-like protein | HC |
            chr1:26454644-26463238 | 20130731
          Length = 1385

 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 115/187 (61%), Gaps = 7/187 (3%)

Query: 5    VVAVENILRYSFKNKKLLEEALTHSSFT---GATSYERLEFIGDPILGLAISNYLYLANP 61
            V  +E++L++SF+++ LL EA+TH S+        Y+RLE++GD +L   I+ +LY  +P
Sbjct: 1139 VSFLESLLKHSFRDRSLLVEAMTHGSYMLPDVPRCYQRLEYLGDAVLDYLITTHLYNEHP 1198

Query: 62   SLDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTVCY 121
             + PGQL+ +R+A+V+ +  A  AI+  +++HV H S  L   +   +     +  +  +
Sbjct: 1199 GMTPGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHASQELHKHIAATLDKFDEQSSSQTF 1258

Query: 122  GGIVKA--PKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTM 179
            G   +A  PKVL DI+ES+A A+++D G++ + +W  IR LLEP+VT D L     P+  
Sbjct: 1259 GWESEASFPKVLGDIIESLAGAIFVDSGYNKEVVWQSIRPLLEPLVTPDTL--TIHPIRE 1316

Query: 180  LFEICQK 186
            L E+CQK
Sbjct: 1317 LTELCQK 1323


>Medtr4g116860.1 | endoribonuclease dicer-like protein | HC |
            chr4:48375007-48390158 | 20130731
          Length = 1625

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 3/194 (1%)

Query: 2    EAAVVAVENILRYSFKNKKLLEEALTHSSFT--GATSYERLEFIGDPILGLAISNYLYLA 59
            E  + ++E  L + F +K LL +A  H S+   G   Y+RLEF+GD +L   I++YLY A
Sbjct: 1198 EVDIPSLEGKLGHHFVHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSA 1257

Query: 60   NPSLDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRHNSVPLVDKVREFVVAIAGEDRTV 119
             P L PGQL+ LR+ +V+ +  A VA+    +  +  +S  L   ++++   I       
Sbjct: 1258 YPKLKPGQLTDLRSLSVNNKAFACVAVDRCFHEFLLCDSSALTGAIKKYADYIRRPASDR 1317

Query: 120  CYGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPIVTLDDLEHNPQPVTM 179
               G    PK L D+VES   AV +D GFDL  +W I+   L+PI+          PV  
Sbjct: 1318 DKNGGPNCPKALGDLVESCIGAVLLDSGFDLNKVWKIMTSFLDPIMKFSS-SLQLSPVRD 1376

Query: 180  LFEICQKNGKQVDI 193
            L E+CQ +  ++++
Sbjct: 1377 LQELCQSHNLELEL 1390


>Medtr3g080020.1 | ribonuclease 3-like protein | HC |
           chr3:36173987-36169101 | 20130731
          Length = 124

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 4/68 (5%)

Query: 8   VENILRYSFKNKKLLEEALTHSSFTGAT---SYERLEFIGDPILGLAISNYLYLANPSLD 64
           VE IL Y FKNK LLEEA THS++ GA    SYE+LE++GD +LGL ++   + + P+L 
Sbjct: 58  VEAILGYEFKNKHLLEEAFTHSTY-GAEDDLSYEQLEYLGDAVLGLLVAKEQFFSYPNLK 116

Query: 65  PGQLSLLR 72
           P  L+LLR
Sbjct: 117 PNFLTLLR 124


>Medtr8g069975.1 | endoribonuclease dicer-like protein | HC |
            chr8:29673147-29681500 | 20130731
          Length = 1219

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 3/78 (3%)

Query: 5    VVAVENILRYSFKNKKLLEEALTHSSFT---GATSYERLEFIGDPILGLAISNYLYLANP 61
            V  +E++L+YSF+++ LL EA+TH S+        Y+RLE++GD +L   I+ +LY   P
Sbjct: 1141 VSYLESLLKYSFRDRSLLVEAMTHGSYMLPDVPRCYQRLEYLGDSVLDYLITTHLYNEYP 1200

Query: 62   SLDPGQLSLLRAANVSTE 79
             + PGQL+ +R+A+V+ E
Sbjct: 1201 GMTPGQLTDMRSASVNNE 1218


>Medtr3g080010.1 | double-stranded RNA-binding motif protein | LC |
           chr3:36163396-36162490 | 20130731
          Length = 147

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 12/124 (9%)

Query: 104 KVREFVVAIAGEDRTVCYGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEP 163
           K+  F  AI  E+  +   G +  PK LADIVES   A++ID    L+ +W I R LLEP
Sbjct: 2   KIEAFTKAI--EEYPIHSNGHIGVPKDLADIVESTIGALFIDCNSSLEIVWKIFRKLLEP 59

Query: 164 IVTLDDLEHNPQPVTMLFEICQKNGKQVDIKY---WRDSDKSIAGVFVDGQIVASAS-SD 219
           I+  D  E    P+T L E+CQK  K++++++   W++S      VF++ + V   +   
Sbjct: 60  IIEPDAFEM--HPLTELTEVCQK--KKLNLQFVDLWKESMN--IDVFINEKFVGRGTYGS 113

Query: 220 QKDI 223
           +KDI
Sbjct: 114 KKDI 117


>Medtr6g071535.1 | double-stranded RNA-binding motif protein | LC |
           chr6:26527444-26530728 | 20130731
          Length = 350

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 65/115 (56%), Gaps = 11/115 (9%)

Query: 105 VREFVVAIAGEDRTVCYGGIVKAPKVLADIVESVAAAVYIDLGFDLQNLWVIIRGLLEPI 164
           ++EF   +A  +  +   G++  PK LADI+ES   A+++D    ++ +W + + LLEPI
Sbjct: 110 IQEFTKGVA--EYPLHSNGLIDVPKDLADIIESTIGAIFVDCNSLVETVWKVFKKLLEPI 167

Query: 165 VTLDDLEHNPQPVTMLFEICQKNGKQVDIKY---WRDSDKSIAGVFVDGQIVASA 216
           +  + ++ +  P+  L E+C  + K++ +++   W++S +    V ++ + V S 
Sbjct: 168 IDPNTIQRH--PMAELHEVC--HNKRLKLQFRDLWKESMR--VEVLINEEFVGSG 216


>Medtr2g039820.1 | ribonuclease III domain protein | LC |
          chr2:17454403-17454962 | 20130731
          Length = 141

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 25/94 (26%)

Query: 3  AAVVAVENILRYSFKNKKLLEEALTHSSFTGATSYERLEFIGDPILGLAISNYLYLANPS 62
          A +  VE ++ Y FKNK LLEEA TH  F  +                      YL   +
Sbjct: 24 ALLNEVEALIGYEFKNKHLLEEAFTHFFFFFS----------------------YL---N 58

Query: 63 LDPGQLSLLRAANVSTEKLARVAIRSGIYRHVRH 96
          L PG L+ LR+ N  +EKLA VAI+ G+ R+++H
Sbjct: 59 LKPGILTPLRSKNADSEKLACVAIKHGLDRYLQH 92