Miyakogusa Predicted Gene

Lj2g3v3184290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3184290.1 Non Characterized Hit- tr|I1M6R0|I1M6R0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.65,2e-19,DUF313,Protein of unknown function DUF313; no
description,DNA-binding pseudobarrel domain; DNA-bindi,CUFF.39838.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092880.1 | B3 domain plant protein | LC | chr5:40556357-4...   107   4e-24
Medtr3g452640.1 | DUF313 domain protein | LC | chr3:19271113-192...    97   6e-21
Medtr7g098870.1 | DUF313 domain protein | LC | chr7:39616550-396...    96   1e-20
Medtr5g007910.1 | DUF313 domain protein | LC | chr5:1586527-1587...    92   2e-19
Medtr5g007890.1 | DUF313 domain protein | LC | chr5:1580417-1581...    79   1e-15
Medtr5g007950.1 | DUF313 domain protein | LC | chr5:1604377-1603...    79   1e-15
Medtr5g007920.1 | DUF313 domain protein | LC | chr5:1591249-1590...    64   7e-11
Medtr4g068060.1 | DUF313 domain protein | LC | chr4:25492856-254...    53   9e-08

>Medtr5g092880.1 | B3 domain plant protein | LC |
           chr5:40556357-40557391 | 20130731
          Length = 344

 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 6/145 (4%)

Query: 9   DQPVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLT-QEEV 67
           ++P LP+  +EKI+++ G EVKLVIQK+L  SDV+   +R SIP  +I   +FLT  EE+
Sbjct: 201 EKPELPLAFKEKIEQMEGCEVKLVIQKELTMSDVDKDQSRLSIPIGKI-EENFLTPTEEL 259

Query: 68  TL----LNGREGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSG 123
           +L     N +   K  G+ V VLDP+L L++ +  KKW+M +   Y I   W ++V  + 
Sbjct: 260 SLDYVPQNKKGRKKIVGMPVFVLDPNLILYKDMCFKKWKMVTGEVYIITNKWNELVAENR 319

Query: 124 LEPEDVVQLWSFRSNGQLNFALVKL 148
            + +  VQLWSFR  G+L FALVKL
Sbjct: 320 FKAKKKVQLWSFRCRGELYFALVKL 344


>Medtr3g452640.1 | DUF313 domain protein | LC |
           chr3:19271113-19270050 | 20130731
          Length = 336

 Score = 96.7 bits (239), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 4/137 (2%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLT--QEEVT 68
           P+LPI ++ KI+EL G+++K ++ KKL  S++    NR  +  +++   DFLT  +++V+
Sbjct: 195 PILPIHIENKIKELNGTDIKYIMGKKLFASNLKDDQNRLLMSIKEVKV-DFLTDIEKDVS 253

Query: 69  LLNGREGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPED 128
           L    E  KP GL V VLDPS   +  + L+KW M  +  Y+++ GW  VV  +  E   
Sbjct: 254 LTKKDENNKPVGLEVIVLDPSFREF-TMSLRKWSMGINKYYSLVHGWKTVVSKNSFEKGK 312

Query: 129 VVQLWSFRSNGQLNFAL 145
            + +W+FR N +L+F L
Sbjct: 313 KLNIWTFRVNDKLHFVL 329


>Medtr7g098870.1 | DUF313 domain protein | LC |
           chr7:39616550-39615735 | 20130731
          Length = 271

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 9/139 (6%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARD---FLTQEEV 67
           P+LPI V+ KI+EL G++++ ++ KKL  SD++ G +R  +P    L  D   FLT+ E 
Sbjct: 135 PILPINVKNKIKELNGTDIRYIMSKKLFASDIDEGQSRLLMP----LKEDELGFLTKTEK 190

Query: 68  TLLNGR-EGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEP 126
             L+ + E  KP GL V VLDP    +  +  KKW+MT+   Y++I  W   V+ +G E 
Sbjct: 191 ETLDEKDENDKPVGLEVIVLDPYFRSF-TMCFKKWKMTNKWVYSLIQNWKHAVRGNGFEI 249

Query: 127 EDVVQLWSFRSNGQLNFAL 145
             ++ +WSFR   +L F L
Sbjct: 250 GQILNVWSFRVKDKLQFVL 268


>Medtr5g007910.1 | DUF313 domain protein | LC | chr5:1586527-1587735
           | 20130731
          Length = 402

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 7/135 (5%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLL 70
           P+LPI V+ KI+E  G+++K ++ KKL  SD+    NR  +P +++   DFLT      +
Sbjct: 268 PILPIHVENKIKEFNGTDIKNIMCKKLSASDLRDDQNRLLMPLKEVKV-DFLTD-----I 321

Query: 71  NGREGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPEDVV 130
              E  K  GL V VLDPS   +  + L+KW M ++  Y+++ GW  VV  +  +    +
Sbjct: 322 EKDESNKQDGLEVTVLDPSFREF-TMSLRKWSMGTNKYYSLLRGWKTVVSKNSFKKGKKL 380

Query: 131 QLWSFRSNGQLNFAL 145
            +W+FR N +L+F L
Sbjct: 381 NIWTFRVNDKLHFVL 395


>Medtr5g007890.1 | DUF313 domain protein | LC | chr5:1580417-1581241
           | 20130731
          Length = 274

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLL 70
           P+LPI+V+ KI+EL G+++K ++ K+L  SD++   +R  +  ++ +A DFL   E    
Sbjct: 138 PILPIDVEIKIKELNGTDIKHIMCKELFDSDLSKHQSRLLMSLKEDIADDFLNDTEKKTF 197

Query: 71  NGREGG---KPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPE 127
             ++ G   K  G+ V VLDPS   +  + L+KW       Y+++  W  V++ +  E  
Sbjct: 198 GRKDRGTKSKLVGIEVIVLDPSFREF-TMSLRKW---GKSLYSLVQDWKHVMRQNSFEIG 253

Query: 128 DVVQLWSFRSNGQLNFALVK 147
             + +W+FR N +L+F L K
Sbjct: 254 QKLNIWTFRVNSKLHFLLDK 273


>Medtr5g007950.1 | DUF313 domain protein | LC | chr5:1604377-1603574
           | 20130731
          Length = 267

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLL 70
           P+LPI+V+ KI+EL G+++K ++ K+L  SD++   +R  +  ++ +A DFL   E    
Sbjct: 131 PILPIDVEIKIKELNGTDIKHIMCKELFDSDLSKHQSRLLMSLKEDIADDFLNDTEKKTF 190

Query: 71  NGREGG---KPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWMKVVKNSGLEPE 127
             ++ G   K  G+ V VLDPS   +  + L+KW       Y+++  W  V++ +  E  
Sbjct: 191 GRKDRGTKSKLVGIEVIVLDPSFREF-TMSLRKW---GKSLYSLVQDWKHVMRQNSFEIG 246

Query: 128 DVVQLWSFRSNGQLNFALVK 147
             + +W+FR N +L+F L K
Sbjct: 247 QKLNIWTFRVNSKLHFLLDK 266


>Medtr5g007920.1 | DUF313 domain protein | LC | chr5:1591249-1590599
           | 20130731
          Length = 216

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 9/106 (8%)

Query: 11  PVLPIEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLL 70
           P+LPI V+ KI+E  G+++K ++ KKL  SD+    NR  +P +++   DFLT      +
Sbjct: 119 PILPIHVENKIKEFNGTDIKNIMCKKLSASDLRDDQNRLLMPLKEVKV-DFLTD-----I 172

Query: 71  NGREGGKPAGLTVNVLDPSLELWEGLRLKKWEMTSSPTYNIIGGWM 116
              E  KP GL V VLDPS   +   R+   E      YN  G ++
Sbjct: 173 EKDESDKPVGLEVIVLDPS---FREFRMSFRENAVLVGYNFDGNFL 215


>Medtr4g068060.1 | DUF313 domain protein | LC |
           chr4:25492856-25493374 | 20130731
          Length = 172

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 5/74 (6%)

Query: 15  IEVQEKIQELGGSEVKLVIQKKLHKSDVNAGHNRFSIPSQQILARDFLTQEEVTLLNGRE 74
           I V+  I  L G++++ V+ K L  +D++ GHNR S+P  QI    F+T+EE  +L+ R+
Sbjct: 102 IRVRNMIAALNGTDIRYVMCKNLFATDLSKGHNRLSLPGGQI----FVTKEEKKILDSRD 157

Query: 75  -GGKPAGLTVNVLD 87
              KP G  V VL+
Sbjct: 158 KDDKPVGFEVIVLE 171