Miyakogusa Predicted Gene

Lj2g3v3184270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3184270.1 Non Characterized Hit- tr|I1JJB4|I1JJB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.05,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Rab3 GTPase-activating
protein catalytic subuni,CUFF.39841.1
         (605 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093230.1 | Rab3 GTPase-activating protein catalytic subun...  1013   0.0  
Medtr3g052790.1 | Rab3 GTPase-activating protein catalytic subun...   786   0.0  
Medtr3g465600.1 | Rab3 GTPase-activating protein catalytic subun...   156   5e-38
Medtr5g093270.1 | Rab3 GTPase-activating protein catalytic subun...   128   2e-29
Medtr3g039910.1 | Rab3 GTPase-activating protein catalytic subun...    67   7e-11

>Medtr5g093230.1 | Rab3 GTPase-activating protein catalytic subunit
           | HC | chr5:40696171-40704190 | 20130731
          Length = 692

 Score = 1013 bits (2619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/601 (81%), Positives = 535/601 (89%), Gaps = 5/601 (0%)

Query: 5   PTFVSKARTAFNSAAAKAERVLMDFKSDREHDKESPXXXXXXXFTKQXXXXXXXXXXXXK 64
           PTFVSKARTAFNSAAAKAERVL+DFKSDR+ DK+SP        T+Q            K
Sbjct: 4   PTFVSKARTAFNSAAAKAERVLLDFKSDRDQDKQSPNS-----LTRQSQIESPSSDNESK 58

Query: 65  LRGEFKHKKWRPPHIGIKQDWQDRFRNIRIGKKDVEDTDKVGDANMAVAFYDENLYILNM 124
           LRGE KH KWRP +IGIKQDWQD+F+NIR+G+K+ EDTDK+GDANMA+ FYDENLYILN+
Sbjct: 59  LRGESKHIKWRPKNIGIKQDWQDKFKNIRLGRKEAEDTDKIGDANMAIPFYDENLYILNV 118

Query: 125 KNDQEAKASEAMPSVEGLTAATKDPIPPASVLKQLAIAVEAGSKSKSMKDFIASTGGSSP 184
           KND EAKASEA+P+VE LTAATKDPIPP+SVLKQLA+AVEAGSK+KSMKD IAS+GGSSP
Sbjct: 119 KNDLEAKASEAIPTVEALTAATKDPIPPSSVLKQLAMAVEAGSKTKSMKDVIASSGGSSP 178

Query: 185 ARERXXXXXXXXXXXXXREKEDNLTSEFSSDEKVVHLINSLFDPEGDFLRRKINSDPEET 244
           A+ER             REKED LTSEFSS+EKVVHLINSLFDPEGDFLRRKINS+PE  
Sbjct: 179 AKERGGLSLSAVKALVLREKEDKLTSEFSSNEKVVHLINSLFDPEGDFLRRKINSNPEGN 238

Query: 245 AITSLPRDIHGAPPESLVVKLAEIIGNYKTLRKMALFWCRVVAELRKLWSEEKHLPGIPQ 304
            +TSLPRDIHGAPPESLVVKLAEI+GNYKT+RKMALFWCRVV ELRK WSEE++LPG+PQ
Sbjct: 239 DMTSLPRDIHGAPPESLVVKLAEIVGNYKTVRKMALFWCRVVEELRKFWSEEQYLPGVPQ 298

Query: 305 NEIPDLKSCLLHQQFQVINCCITRKRLRAIATESLDSMMMQASSNIKEPTNNDGEAPASP 364
           N+IPDLK+CLL+Q FQVINCCI+RKRLR IATESL+SMMMQASSNIKE  N+DG APA+P
Sbjct: 299 NDIPDLKTCLLYQHFQVINCCISRKRLRIIATESLESMMMQASSNIKESANDDGGAPANP 358

Query: 365 VLYARLDNGELVLRLGADCPAGDLTLLETGEPVYSPLTQEGPLLTEDLIRETEEFVLRTG 424
           VLYARL+ GE VLRLGA   +GDLTLLETGEPVYSP+TQEGPLLTEDLIRETEEFVLRTG
Sbjct: 359 VLYARLNTGEHVLRLGAGRRSGDLTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTG 418

Query: 425 SVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLSTRG 484
           SVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLS++G
Sbjct: 419 SVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLSSKG 478

Query: 485 QLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNALEDIHPSELYRQLFVS 544
           QLSRRMQKEGNLW ELW TSKPVPAVKQAPLFDEDLAVEGIL+A EDIHP EL+ QLFVS
Sbjct: 479 QLSRRMQKEGNLWHELWATSKPVPAVKQAPLFDEDLAVEGILHAFEDIHPFELFGQLFVS 538

Query: 545 LLGLGFAIAEPMLSSNSDFSKVFYDCKEYIVATCQSNKLSEKVDELVQVYETVETMLLNP 604
           LLGLGFAIAEPMLSS+ DFSK+F DCKEYIVATCQSNK SEKVD+LVQVYETVETML+NP
Sbjct: 539 LLGLGFAIAEPMLSSSKDFSKLFCDCKEYIVATCQSNKWSEKVDDLVQVYETVETMLMNP 598

Query: 605 E 605
           E
Sbjct: 599 E 599


>Medtr3g052790.1 | Rab3 GTPase-activating protein catalytic subunit
           | HC | chr3:20895915-20902043 | 20130731
          Length = 704

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/603 (66%), Positives = 460/603 (76%), Gaps = 3/603 (0%)

Query: 6   TFVSKARTAFNSAAAKAERVLMDFKSDREHDKESPXXXXXXXFTKQXXXXXXXXXXXXKL 65
           +FVSKART  +SAA KAERVL DFKSD   +             +             K 
Sbjct: 8   SFVSKARTVLHSAAVKAERVLNDFKSDLAGEDFDKHLREDDGMQRNQEDDYAKDENESKF 67

Query: 66  RGEFKHKKWRPPHIGIKQDWQDRFRNIRIGKKDVEDTDKVGDANMAVAFYDENLYILNMK 125
             E K  KWRP H G KQ W+DR  NIR G+K+ EDTDKV DA+M V    + + +L+++
Sbjct: 68  LVELKQIKWRPRHFGTKQHWKDRINNIRKGRKESEDTDKVEDASMDVIPLFDEMCVLHVE 127

Query: 126 NDQEAKASEAMPSVEGLTAATKDPIPPASVLKQLAIAVEAGSKSKSMKDFIASTGGSSPA 185
           ND +AK SEA  SVEGLT A +  IPP+SVLKQLAIAVEAG K+ SMK+F AST GSSP+
Sbjct: 128 NDLDAKGSEAFSSVEGLTVAARRLIPPSSVLKQLAIAVEAGMKANSMKNFAASTEGSSPS 187

Query: 186 RERXXXXXXXXXXXXXREKEDNLTSEFSSDEKVVHLINSLFDPEGDFLRRKINSDPEETA 245
            E+             REKED LTSEF+S EK V+LI+SLF+PEG FLRRKINS+ EE  
Sbjct: 188 IEKAGLRLSAVKALVLREKEDKLTSEFTSKEKFVYLISSLFNPEGYFLRRKINSNQEEIE 247

Query: 246 ITSLPRDIHGAPPESLVVKLAEIIGNYKTLRKMALFWCRVVAELRKLWSEEKHLPGIPQN 305
           I SL RDIHGAPPESLVVKLAE+IGN KTLR+M +FWCRV+AE+RKLWSEEKHLPG+P +
Sbjct: 248 IPSLIRDIHGAPPESLVVKLAEVIGNLKTLREMEIFWCRVIAEIRKLWSEEKHLPGVPLD 307

Query: 306 EIPDLKSCLLHQQFQVINCCITRKRLRAIATESLDSMMMQA-SSNIKEPTNNDGEAPASP 364
           +IPDLKSCLL+QQFQVINCCI+RKR   IA+ESLD M+M+A S+N  E TN      AS 
Sbjct: 308 DIPDLKSCLLNQQFQVINCCISRKRRHIIASESLDYMLMEANSNNTPESTNCCDGTSASR 367

Query: 365 VLYARLDNGELVLRLGADCPAGDLTLLETGEPVYSPLTQEGPLLTEDLIRETEEFVLRTG 424
           +LYARL  GELVLRLGA CP+G+LTLLETGEP YSP+TQE PLLTEDLI+ETEE +L+TG
Sbjct: 368 LLYARLSTGELVLRLGAHCPSGNLTLLETGEPAYSPITQEAPLLTEDLIKETEELILQTG 427

Query: 425 SVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIE--DSDVFDSGESLST 482
           S GAGCSQLLSDMQAFKAANPGCILEDFVRW+SPPDWT+ EAS E   S      +S S 
Sbjct: 428 SFGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTEIEASTEDSCSSDGSGSDSSSN 487

Query: 483 RGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNALEDIHPSELYRQLF 542
           RG LSRRM+KEGNLWRELWETSKPVPAVKQAPLFDEDL VEGIL+A +DI P EL+ QLF
Sbjct: 488 RGHLSRRMRKEGNLWRELWETSKPVPAVKQAPLFDEDLTVEGILDAFKDIQPVELFGQLF 547

Query: 543 VSLLGLGFAIAEPMLSSNSDFSKVFYDCKEYIVATCQSNKLSEKVDELVQVYETVETMLL 602
           VSLLGLGF IAEP+LS N DFSK+F DCKE++V TCQS +  EK+DELVQVYETVET+L 
Sbjct: 548 VSLLGLGFTIAEPLLSGNDDFSKLFNDCKEFVVTTCQSIRFGEKIDELVQVYETVETLLQ 607

Query: 603 NPE 605
           NPE
Sbjct: 608 NPE 610


>Medtr3g465600.1 | Rab3 GTPase-activating protein catalytic subunit
           | HC | chr3:26564199-26578240 | 20130731
          Length = 952

 Score =  156 bits (395), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 187/397 (47%), Gaps = 52/397 (13%)

Query: 251 RDIHGAPPESLVVKL---AEIIGNYKTLRKMALFWCRVVAELRKLWSEEKHLPGIPQNEI 307
           R + GAP ESL  +    +   GN   +R +++ W   V E+R  W E + LP +  N  
Sbjct: 422 RSVKGAPLESLFAQFCLHSLWFGNC-NIRAISVLWIEFVREVRWCWEESQPLPRMAPNGS 480

Query: 308 PDLKSCLLHQQFQVINCCITRK------RLRAIAT-ESLDSMMMQASS------NIKEPT 354
            DL + L++Q+ Q++  CI RK          I + + +DSM  + S       +I+ P+
Sbjct: 481 IDLSTSLIYQKLQMLAICIERKCQMNEDYQDCIGSIDHIDSMTEEESVVGDDLLSIQTPS 540

Query: 355 ----NNDGEAPASPVLYARLDNGELVLRLGADCPAGDLTLLETGEPVYSPLTQEGPLLTE 410
                     P    LY    +     R G+      + LL++ + +++P TQE PL+TE
Sbjct: 541 EIFPGKVDRKPEDMDLYKDKKSSNFTRR-GSAGIVDSMMLLKSYQSMHAPYTQEPPLMTE 599

Query: 411 DLIRETEEFVLRTGSVGAGCSQL-----LSDMQAFKAANPGCILEDFVRWHSPPDW---- 461
           D+  E  + V   G      +QL      SDM AFKAANP  I EDF+RWHSP DW    
Sbjct: 600 DMHEERMQAVEAIGDSFNFSAQLEKDILTSDMSAFKAANPDAIFEDFIRWHSPGDWEADD 659

Query: 462 ---TDNEASIEDSDVFDSGESLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDE 518
              +   AS    ++  S +S   RG+LS+RM + GN+WR++W +S  +PA +Q PL D 
Sbjct: 660 DPESSGSASSNALEINKSKDSWPPRGKLSKRMSEHGNMWRKIWSSSPALPASEQKPLLDP 719

Query: 519 DLAVEGILNALEDIHPSELYRQLFVSLLGLGFAIAEPMLSSNSDF------SKV--FYDC 570
           +   E +L+ LE + P +L  Q    ++   F  A   LS  S        +K+   Y  
Sbjct: 720 NREGEKVLHYLETLRPHQLLEQ----MVSTAFRAAADTLSQTSYGELKQMETKIQQLYPT 775

Query: 571 KEYIVATCQSNKLS------EKVDELVQVYETVETML 601
               +   Q N+LS      E    L  V+E VE +L
Sbjct: 776 MASALRPLQVNRLSADSETIEDFRRLCVVFERVEKLL 812


>Medtr5g093270.1 | Rab3 GTPase-activating protein catalytic subunit
           | HC | chr5:40717981-40719357 | 20130731
          Length = 95

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 72/86 (83%), Gaps = 6/86 (6%)

Query: 376 VLRLGADCPAGDLTLLETGEPVYSPLTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLS 435
           VLRLGAD  +G+LTLLETG+PVYS +TQEGPL+TEDLIR+ EE V     VGA CSQLLS
Sbjct: 15  VLRLGADRSSGNLTLLETGKPVYSSVTQEGPLITEDLIRQKEECV-----VGARCSQLLS 69

Query: 436 DMQAFKAANPGCILEDFVRWH-SPPD 460
           DMQAF+  NPGCILEDFVRWH SPPD
Sbjct: 70  DMQAFEDVNPGCILEDFVRWHSSPPD 95


>Medtr3g039910.1 | Rab3 GTPase-activating protein catalytic subunit
           | LC | chr3:13948256-13950884 | 20130731
          Length = 177

 Score = 66.6 bits (161), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 22/82 (26%)

Query: 426 VGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLSTRGQ 485
           VGAGCSQLLSDMQAFKA+                           S    S ES S +G 
Sbjct: 17  VGAGCSQLLSDMQAFKAS----------------------TEDSCSSDGSSSESSSNKGH 54

Query: 486 LSRRMQKEGNLWRELWETSKPV 507
           LSRRM+KEGNLWRELWETSK +
Sbjct: 55  LSRRMRKEGNLWRELWETSKFI 76