Miyakogusa Predicted Gene

Lj2g3v3164170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3164170.1 tr|G7I4S9|G7I4S9_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_1g075520 PE=4
SV=1,83.78,0,LeuD/IlvD-like,Aconitase/3-isopropylmalate dehydratase,
swivel; no description,Aconitase/3-isopropyl,CUFF.39826.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC | ch...   277   2e-75
Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC | ch...   258   1e-69
Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC | ch...   251   2e-67
Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC | ch...   240   3e-64
Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC | ch...   240   4e-64
Medtr4g115490.1 | transmembrane protein, putative | LC | chr4:47...   112   1e-25
Medtr4g074000.1 | aconitase carboxy-terminal domain protein | LC...    86   1e-17

>Medtr1g075520.1 | cytoplasmic-like aconitate hydratase | HC |
           chr1:33443587-33449043 | 20130731
          Length = 895

 Score =  277 bits (709), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 124/148 (83%), Positives = 138/148 (93%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MFKSIYE+IT GNPMW  LSVP+STLYSWDPNS YIHEPPYFKNMTM+PPGL  I+DCYC
Sbjct: 609 MFKSIYETITKGNPMWDRLSVPASTLYSWDPNSTYIHEPPYFKNMTMEPPGLHRIKDCYC 668

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LLKFGDG+TTD ISPPG IHKDSPAA+YL+EHGVDH+DFNSYGSRRGN EVMVRGTF++I
Sbjct: 669 LLKFGDGVTTDQISPPGSIHKDSPAAKYLIEHGVDHKDFNSYGSRRGNHEVMVRGTFANI 728

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           RLVNKLLNGEVGPKT+H PTGEK++VY+
Sbjct: 729 RLVNKLLNGEVGPKTVHIPTGEKMTVYD 756


>Medtr4g048190.1 | cytoplasmic-like aconitate hydratase | HC |
           chr4:17044934-17035507 | 20130731
          Length = 979

 Score =  258 bits (660), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 116/148 (78%), Positives = 131/148 (88%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF+S YESIT GNPMW++L VP+ TLYSWD NS YIHEPPYFKNMTMDPPG  G++D YC
Sbjct: 693 MFRSTYESITKGNPMWNKLQVPADTLYSWDSNSTYIHEPPYFKNMTMDPPGSHGVKDAYC 752

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G I+KDSPAA+YLLEHGV+ +DFNSYGSRRGNDEVM RGTF++I
Sbjct: 753 LLNFGDSITTDHISPAGSINKDSPAAKYLLEHGVERKDFNSYGSRRGNDEVMARGTFANI 812

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           RLVNKLLNGEVGPKT+H PTGEKL V++
Sbjct: 813 RLVNKLLNGEVGPKTVHIPTGEKLYVFD 840


>Medtr2g088360.1 | cytoplasmic-like aconitate hydratase | HC |
           chr2:37230917-37240757 | 20130731
          Length = 979

 Score =  251 bits (641), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 130/148 (87%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF+S YE+IT GNPMW+EL VP+  LYSWDPNS YIHEPPYFK+MTMDPPG  G++D YC
Sbjct: 693 MFRSTYEAITKGNPMWNELQVPAEKLYSWDPNSTYIHEPPYFKDMTMDPPGPHGVKDAYC 752

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G I+KDSPAA+YL++ GV+ +DFNSYGSRRGNDEVM RGTF++I
Sbjct: 753 LLNFGDSITTDHISPAGNINKDSPAAQYLMQRGVEKKDFNSYGSRRGNDEVMSRGTFANI 812

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNKLLNGEVGPKT+H PTGEKL V++
Sbjct: 813 RIVNKLLNGEVGPKTVHIPTGEKLYVFD 840


>Medtr5g022940.2 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092237-9099824 | 20130731
          Length = 797

 Score =  240 bits (613), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 122/148 (82%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF+  Y +IT GNPMW+ LSVPS  LY+WD  S YIHEPPYFK M+M PPG  G+++ YC
Sbjct: 509 MFRETYNAITKGNPMWNSLSVPSGNLYAWDSTSTYIHEPPYFKGMSMSPPGSHGVKNAYC 568

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G IHKDSPAA YL E GVD +DFNSYGSRRGNDEVM RGTF++I
Sbjct: 569 LLNFGDSITTDHISPAGSIHKDSPAARYLTERGVDRRDFNSYGSRRGNDEVMARGTFANI 628

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNK LNGEVGPKTIH P+GEKLSV++
Sbjct: 629 RIVNKFLNGEVGPKTIHVPSGEKLSVFD 656


>Medtr5g022940.1 | cytoplasmic-like aconitate hydratase | HC |
           chr5:9092197-9099891 | 20130731
          Length = 901

 Score =  240 bits (612), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 122/148 (82%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF+  Y +IT GNPMW+ LSVPS  LY+WD  S YIHEPPYFK M+M PPG  G+++ YC
Sbjct: 613 MFRETYNAITKGNPMWNSLSVPSGNLYAWDSTSTYIHEPPYFKGMSMSPPGSHGVKNAYC 672

Query: 61  LLKFGDGITTDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDEVMVRGTFSSI 120
           LL FGD ITTDHISP G IHKDSPAA YL E GVD +DFNSYGSRRGNDEVM RGTF++I
Sbjct: 673 LLNFGDSITTDHISPAGSIHKDSPAARYLTERGVDRRDFNSYGSRRGNDEVMARGTFANI 732

Query: 121 RLVNKLLNGEVGPKTIHFPTGEKLSVYE 148
           R+VNK LNGEVGPKTIH P+GEKLSV++
Sbjct: 733 RIVNKFLNGEVGPKTIHVPSGEKLSVFD 760


>Medtr4g115490.1 | transmembrane protein, putative | LC |
           chr4:47711682-47713394 | 20130731
          Length = 282

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 70/111 (63%), Gaps = 26/111 (23%)

Query: 1   MFKSIYESITNGNPMWSELSVPSSTLYSWDPNSMYIHEPPYFKNMTMDPPGLQGIEDCYC 60
           MF S YE+IT GNPMW+EL VP+   YS DPNS  IH+                      
Sbjct: 187 MFTSTYEAITKGNPMWNELQVPAEKPYSRDPNSTCIHD---------------------- 224

Query: 61  LLKFGDGIT-TDHISPPGRIHKDSPAAEYLLEHGVDHQDFNSYGSRRGNDE 110
              FGD IT TDHISP G I+KDSPAA+YL++ GV+ +DFNSYGSRRGNDE
Sbjct: 225 ---FGDSITKTDHISPTGNINKDSPAAQYLMQSGVEKKDFNSYGSRRGNDE 272


>Medtr4g074000.1 | aconitase carboxy-terminal domain protein | LC |
           chr4:28119352-28122542 | 20130731
          Length = 222

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 47/57 (82%)

Query: 90  LEHGVDHQDFNSYGSRRGNDEVMVRGTFSSIRLVNKLLNGEVGPKTIHFPTGEKLSV 146
           ++ GV+ + FNSYGSRRGNDEVM RGTF++IR+VNKLLN EVGPKT H   GE LSV
Sbjct: 1   MQRGVEKKVFNSYGSRRGNDEVMSRGTFANIRIVNKLLNDEVGPKTAHSNRGEALSV 57