Miyakogusa Predicted Gene

Lj2g3v3150890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3150890.2 Non Characterized Hit- tr|I1J208|I1J208_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.93,4e-17,seg,NULL,CUFF.39797.2
         (500 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092580.1 | hypothetical protein | HC | chr5:40439801-4043...   412   e-115
Medtr6g033325.1 | hypothetical protein | HC | chr6:10658863-1065...   259   3e-69

>Medtr5g092580.1 | hypothetical protein | HC |
           chr5:40439801-40435401 | 20130731
          Length = 587

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/359 (61%), Positives = 258/359 (71%), Gaps = 11/359 (3%)

Query: 138 RKRKQGSDIPASSRMDTGQSGFVFPELTASPLRRFHLIXXXXXXXXX--XXXXXLNEVDP 195
           +KR   SDIPAS  ++TGQS FVFP+L  SP+ RF L+                 N+V P
Sbjct: 213 QKRDHASDIPASVGLETGQSSFVFPKLVTSPIPRFKLLDSDDDDDDLFGEDVGGENKVGP 272

Query: 196 GLKEAMS-NQSKPSSSLGQNRKTSFHVNQNPDLWKDFSPVKPFSVPTPAFNEICEEYFNS 254
                 + N++ P +   Q+RKT F VN+N DLWKDFSP+K FSVPTP FNE+ EEYF S
Sbjct: 273 SSSSGQTCNRNTPLTYSEQDRKTQFDVNRNQDLWKDFSPMKNFSVPTPVFNEVFEEYFCS 332

Query: 255 AKHKTVEQSGIDISESHNERYLGVNSSFQKDPQLSESTDPLPPAHRYFFHEDPRIRQLVC 314
            K   V +SGI +SE++NE Y GV+S +Q+D Q+ E   PLPPAHRYF HEDPRI+QLV 
Sbjct: 333 RKSTEVPRSGIGMSENYNETYCGVSSGYQQDEQIWEVAGPLPPAHRYFLHEDPRIQQLVR 392

Query: 315 SRLCNFSPLRVNRVNQQPNASHIDYMGQFDNGGASKTQGVKVNSTTSRKNKSKISSVEET 374
           SRLCNF PL VN VNQQ N SHIDYMGQFDNGGASKT G +VN +TSR++KS   +VEE+
Sbjct: 393 SRLCNFFPLGVNSVNQQQNGSHIDYMGQFDNGGASKTPG-RVNGSTSRRSKSTNLNVEES 451

Query: 375 FNASEGWVDPKVISHFSSGESSRKKATKRNSTKNSVSKRRNETNKSNSSNVPYASGNWVE 434
           FNASEGWVDPK+IS F SG SSRK  TKRN+TK SVSK +N   K N SNV   SGNWVE
Sbjct: 452 FNASEGWVDPKIISPFGSGTSSRKNTTKRNNTKRSVSKAKNAQCKLNPSNV---SGNWVE 508

Query: 435 PKSCTSMPKDAGKRRVQAGVQEGVQSAGHWFTNSDGRKVYVNKSGKELTGRIAYSHYRK 493
           PKS   MPKDAGKRRVQA      QSAGHW+T SDGRKVYV+KSG+ELTGR AY HYRK
Sbjct: 509 PKSRAGMPKDAGKRRVQA----SSQSAGHWYTGSDGRKVYVSKSGQELTGRNAYKHYRK 563



 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 94/232 (40%), Gaps = 12/232 (5%)

Query: 1   MAECEAPSFSLGFDLTLXXXXXXXXXXXXXXXXXXESLQAXXXXXXXXXXXXXXXXLLKR 60
           MAE EAPSFSLG DL                    + +                  +LKR
Sbjct: 1   MAEFEAPSFSLGLDL------DDTPPPSPSTSPNHDPVPQEVPDSDPESQPDPPIRILKR 54

Query: 61  LRRGXXXXXXXXXXXXXXXXXXXXXXXXXIEEFSSQDEPLQEHAHXXXXXXXXXXXXXXX 120
           LRR                          IEEFSSQ+EPLQ  AH               
Sbjct: 55  LRRAPPSSSQTESLPSFFDPDEDD-----IEEFSSQEEPLQVSAHSSVQNRSVCGSSKVS 109

Query: 121 XXXXXXFTPHSGSNSGERKRKQGSDIPASSRMDTGQSGFVFPELTASPLRRFHLIXXXXX 180
                  T HS SNS  +KRKQG D+PAS  ++TGQSGF+FP L  SP+RR  L+     
Sbjct: 110 LKGAGVLTSHSCSNSMGKKRKQGLDVPASVGLETGQSGFIFPNLADSPIRRCKLLDSDDD 169

Query: 181 XXXXXXXXXLNEVDPGLKEAMS-NQSKPSSSLGQNRKTSFHVNQNPDLWKDF 231
                    +N+V P      + NQS P +SL QNRKT F   Q  D   D 
Sbjct: 170 DLFGEDVFGVNKVGPSSSTGQAYNQSTPLTSLEQNRKTQFDATQKRDHASDI 221


>Medtr6g033325.1 | hypothetical protein | HC |
           chr6:10658863-10654509 | 20130731
          Length = 557

 Score =  259 bits (663), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 172/350 (49%), Positives = 210/350 (60%), Gaps = 59/350 (16%)

Query: 148 ASSRMDTGQSGFVFPE--LTASPLRRFHLIXXXXXXXXXXXXXX-LNEVDPGLKEAMSNQ 204
           AS  ++ GQS   FP+  L ASPLR+  L+                +++ P L     N 
Sbjct: 239 ASVGLEAGQSRSAFPKPKLAASPLRKIQLLDSDSDDDLIVEDVKGTDKLRPALSTGKRNT 298

Query: 205 SKPSSSLGQNRKTSF-HVNQNPDLWKDFSPVKPFSVPTPAFNEICEEYFNSAKHKTVEQS 263
             P +S  Q++K  F    QN    K FSPVK FS+PTPAFN++C+EYF SA +    +S
Sbjct: 299 --PLNSSKQDKKVRFVDEEQN---QKHFSPVKTFSIPTPAFNDVCDEYFRSANNTQAPKS 353

Query: 264 GIDISESHNERYLGVNSSFQKDPQLSESTDPLPPAHRYFFHEDPRIRQLVCSRLCNFSPL 323
                 +HNE Y  V+S  Q+D Q+ E+  PLPPAH Y+FHED RI QLV SRLCNFSPL
Sbjct: 354 ------NHNETYHRVDSECQEDEQIWEAAGPLPPAHHYYFHEDSRIPQLVSSRLCNFSPL 407

Query: 324 RVNRVNQQPNASHIDYMGQFDNGGASKTQGVKVNSTTSRKNKSKISSVEETFNASEGWVD 383
            VN ++QQ N   IDY+GQFD+GG           +T R++KSK       FN SEG VD
Sbjct: 408 CVNALDQQQN---IDYIGQFDSGG-----------STRRRSKSK------KFNGSEGSVD 447

Query: 384 PKVISHFSSGESSRKKATKRNSTKNSVSKRRNETNKSNSSNVPYASGNWVEPKSCTSMPK 443
           P +IS      SSRKKATKRNST     KR NET+K NSS+V   S +WVE       PK
Sbjct: 448 PNIIS-----TSSRKKATKRNST-----KRNNETSKLNSSDV---SASWVE-------PK 487

Query: 444 DAGKRRVQAGVQEGVQSAGHWFTNSDGRKVYVNKSGKELTGRIAYSHYRK 493
           DAG+RRVQA      QSAGHW+T SDGRKVYV+K+GKE TGR AY  YRK
Sbjct: 488 DAGQRRVQA----SDQSAGHWYTGSDGRKVYVDKNGKESTGRNAYRLYRK 533



 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 102/249 (40%), Gaps = 27/249 (10%)

Query: 1   MAECEAPSFSLGFDLTLXXXXXXXXXXXXXXXXXXESLQAXXXXXXXXXXXXXXXXLLKR 60
           M + EAPSFSLGFDL                      +                  +L R
Sbjct: 2   MDDEEAPSFSLGFDLDSPNQDPTTL------------IVPDSDSDPDTRPDPPPRRILSR 49

Query: 61  LRRGXXXXXXXXXXXXXX-----XXXXXXXXXXXIEEFSSQDEPLQEHAHXXXXXXXXXX 115
           LRRG                              IEEFSSQDEP+Q  AH          
Sbjct: 50  LRRGLPSSSSFVRRPTEPPPPLFVVDIDVDDYDDIEEFSSQDEPVQVSAHSSGRNRSVCS 109

Query: 116 XXXXXXXXXXXFTPHSGSNSGERKRKQGSDIPASSRMDTGQSGFVFPELTASPLRRFHLI 175
                        PHS  +S E+KRKQ  +IP S  ++TG+SG VF +  ASPLR+F LI
Sbjct: 110 SSKVSLKGAGVLIPHSSISSSEKKRKQDLEIPDSVGLETGRSGSVFRKFAASPLRKFQLI 169

Query: 176 XXXXXXXXXXXXXXLNEVDPGLKEA---MSNQSKPSSSLGQNRKTSF-HVNQN-PDLWKD 230
                           E  PG   +   M N++ P +SL Q+ KT F  VN+N  DLWKD
Sbjct: 170 DSDDDEMVVG-----GENKPGPSSSTGPMCNRNTPLTSLEQDSKTQFADVNRNQEDLWKD 224

Query: 231 FSPVKPFSV 239
            SPVK FS+
Sbjct: 225 LSPVKNFSI 233