Miyakogusa Predicted Gene

Lj2g3v3149360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3149360.1 Non Characterized Hit- tr|I3SLZ9|I3SLZ9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,64.58,0.00000000004, ,77514_g.1
         (84 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092140.1 | plant/F10M23-360 protein | HC | chr5:40237456-...    70   6e-13

>Medtr5g092140.1 | plant/F10M23-360 protein | HC |
          chr5:40237456-40242077 | 20130731
          Length = 525

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 39/48 (81%)

Query: 34 ELQMLSSPQYPQDLLPLLSKQVSWTIINSLHSAVDILPLYMGAASSPN 81
          +     SP +P+DLLPL+ KQ+SW IINSLHSAVDILP+++ AASSPN
Sbjct: 23 QFSTFKSPFHPRDLLPLMPKQISWPIINSLHSAVDILPVFVAAASSPN 70