Miyakogusa Predicted Gene

Lj2g3v3149230.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3149230.1 Non Characterized Hit- tr|I1HSF4|I1HSF4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,52.38,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.40486.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092140.1 | plant/F10M23-360 protein | HC | chr5:40237456-...   250   5e-67
Medtr5g036420.1 | plant/F10M23-360 protein | HC | chr5:15875140-...   164   4e-41

>Medtr5g092140.1 | plant/F10M23-360 protein | HC |
           chr5:40237456-40242077 | 20130731
          Length = 525

 Score =  250 bits (638), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 110/142 (77%), Positives = 130/142 (91%)

Query: 21  FSTFLVSLTGLQVSALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQ 80
            +T L+ LT LQ S  KSPFHP+DLLP++PKQ+SWPI+N+LHSAVDILP++V AASSPN 
Sbjct: 12  ITTLLIFLTCLQFSTFKSPFHPRDLLPLMPKQISWPIINSLHSAVDILPVFVAAASSPNN 71

Query: 81  IDEWKGACFYQNTAWMEFHNKSGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYY 140
             EWKGACFY+N AWMEFHNK+GS+FGGGTLH+KVSNAHS+TC+D+YIFATPYRVTWDYY
Sbjct: 72  TPEWKGACFYKNQAWMEFHNKTGSQFGGGTLHLKVSNAHSYTCMDIYIFATPYRVTWDYY 131

Query: 141 FLAREHTLEIKEWEGKAEYEYV 162
           FL+REHTLEIKEW+G+AEYEYV
Sbjct: 132 FLSREHTLEIKEWDGRAEYEYV 153


>Medtr5g036420.1 | plant/F10M23-360 protein | HC |
           chr5:15875140-15868742 | 20130731
          Length = 522

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 74/131 (56%), Positives = 95/131 (72%), Gaps = 2/131 (1%)

Query: 34  SALKSPFHPQDLLPVLPKQVSWPIMNTLHSAVDILPLYVGAASSPNQID-EWKGACFYQN 92
            + K PF   D+LPVLPK++SWP++N  HSAVD+LP +VG+ +  N    +WKGACF+ N
Sbjct: 22  DSFKVPFRVNDVLPVLPKEISWPVLNNFHSAVDLLPSFVGSVTPYNNGSIQWKGACFFDN 81

Query: 93  TAWMEFHNK-SGSEFGGGTLHIKVSNAHSWTCLDLYIFATPYRVTWDYYFLAREHTLEIK 151
            A +EF N    S+ GG  L++K   AHSWTC+DLY+FATPYR+TWDYYF AREHTL++ 
Sbjct: 82  QAKLEFTNHGDDSDLGGAVLYLKTGEAHSWTCMDLYVFATPYRITWDYYFSAREHTLKLD 141

Query: 152 EWEGKAEYEYV 162
            WE  AE EYV
Sbjct: 142 SWEEPAELEYV 152