Miyakogusa Predicted Gene

Lj2g3v3121040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3121040.1 tr|A9SXZ9|A9SXZ9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85491
,29.73,0.000000000007,HSP20-like chaperones,HSP20-like chaperone;
HSP20,Alpha crystallin/Hsp20 domain; PREDICTED: SIMILAR ,CUFF.39778.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091960.1 | peroxisomal small heat shock protein | HC | ch...   362   e-100

>Medtr5g091960.1 | peroxisomal small heat shock protein | HC |
           chr5:40143233-40140255 | 20130731
          Length = 259

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/260 (68%), Positives = 206/260 (79%), Gaps = 10/260 (3%)

Query: 1   MESELVRRRIDMISAHFAPSDEISTTHVLPLNCSGSMNSVLSRRDNKVYFARQASASFGY 60
           ME+E V+RR+D I+AHFA +++IS+TH+LP+NCSGS+NSVL R DNKVYFARQ+SASFGY
Sbjct: 1   MENEFVKRRLDTIAAHFASNEDISSTHLLPMNCSGSLNSVLRRCDNKVYFARQSSASFGY 60

Query: 61  FMRQASVKEGDSTTFIAPKIHGGKSEGPSNSRAPCFARPARTE---------PMTKVQGG 111
           FMRQ S +EGDST+ +APK +  K EGP+ +R PCFARPAR E         PMTK+QG 
Sbjct: 61  FMRQTSAEEGDSTSSVAPKTNMAKYEGPNYAREPCFARPARKESIVSNSVVQPMTKMQGY 120

Query: 112 DSSSIEPPKFSRPSKQIGQRNQLNYKKNSCHPDTGTVWSPRMDVVESEGKYVIAVEVPGS 171
           D  S+EPP F+RPSKQI Q  QLN +K   H + G  WSPRMDV ESE KYVI VEVPG 
Sbjct: 121 DFDSLEPPSFARPSKQIRQGEQLNNEKRIHHSEIGIEWSPRMDVAESESKYVIMVEVPGV 180

Query: 172 SINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKREILHGPYEVVWSLPPGVN 231
           S+NDIRVEVDDQKL +KGRRST   RVAGCP  +S SSYHKREIL+GPYEVVW LP GVN
Sbjct: 181 SVNDIRVEVDDQKLSIKGRRSTGSWRVAGCP-NASVSSYHKREILYGPYEVVWPLPHGVN 239

Query: 232 MDNISAEFSDGFLQIIVPKV 251
            DN+SAEF DGFLQII+PKV
Sbjct: 240 KDNVSAEFLDGFLQIIIPKV 259