Miyakogusa Predicted Gene
- Lj2g3v3109780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3109780.1 Non Characterized Hit- tr|G7K3E0|G7K3E0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,55.97,0,Rad18-like CCHC zinc finger,Zinc finger, Rad18-type
putative; seg,NULL; coiled-coil,NULL,CUFF.39746.1
(1378 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g091810.2 | hypothetical protein | HC | chr5:40073961-4006... 1014 0.0
Medtr5g091810.1 | hypothetical protein | HC | chr5:40074210-4006... 1014 0.0
Medtr3g452530.1 | hypothetical protein | LC | chr3:19216506-1921... 84 1e-15
>Medtr5g091810.2 | hypothetical protein | HC | chr5:40073961-40064781
| 20130731
Length = 1378
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/990 (58%), Positives = 677/990 (68%), Gaps = 49/990 (4%)
Query: 422 DLTKKKEDAYKRMVQTTVRSSRKLRGSTDNKSIALHDIDPSVHRKKLCLNGLSVRKKQEV 481
+ T+KKE A KR VQT V S RKLR + ++ AL DI+PSVHRKKL LNGLSV KK +V
Sbjct: 405 EFTRKKESANKREVQTDVNSCRKLRDTIGDEMGALQDIEPSVHRKKLGLNGLSVEKKPQV 464
Query: 482 KNCDSVGKQQKAVSSVGGIPKNHSKHVSGKTSSDCNSFQDGTEDSDYSDYNDQMPTSDRQ 541
KN +SVGK QKA S V GI +NH KHVSGK S+ C QDGTE+SD +Y DQ+ TSDR
Sbjct: 465 KNYNSVGKWQKADSPVRGIFRNHLKHVSGKISNAC-KIQDGTEESD--EY-DQVLTSDRH 520
Query: 542 VKFSGKADIHCEKERDSVDETMFNISSDAPATSSVKLQSSGSDEENASWGANRNYDHIAI 601
VKFS K +I ++R S DETMF+ SSDA ATS K QSSG+DEE +S+ AN+NYD IA+
Sbjct: 521 VKFSYKDEIVGPEKRYSFDETMFSTSSDALATSFAKEQSSGTDEECSSFEANKNYDQIAL 580
Query: 602 N--VDKEKSVCPIVESKQFVNTMEQVTVQSFLKPCTNQENXXXXXXXXXXXXXMAINDNN 659
N VDK + VCPI ESKQF T++QV +FLKPC NQE MA+ D+N
Sbjct: 581 NIEVDKREEVCPITESKQFSCTLKQVMGLNFLKPCINQEKANQLEQKSELLTKMAVYDDN 640
Query: 660 RLLHFDGGNTTTLLFSPYADMSRPLAAVKEDKTSGINTQVCESGSFSSSAKFIDHSEDPP 719
DGGN TT+ FS +PL+AV+E + N QV ESG FS KFID+SEDP
Sbjct: 641 NSQLLDGGNITTVNFS------KPLSAVQEGQMCAKNIQVSESGDFSFGGKFIDYSEDP- 693
Query: 720 TYQFGAVNKNGDTKTTLEHSSSYSVSYYKANENPEASLQTY---GDTDNSGHALGDRQLP 776
T+Q VNKN TKT LE SSSYS Y K NE PE+ + GD NS L D+QL
Sbjct: 694 TFQVDIVNKNASTKTLLEPSSSYSAPYGKVNEKPESPSPSSSYYGDNGNSNQTLDDKQLD 753
Query: 777 HVFPGSMIDNTFPFTSWSKGRDINSSSNPNFFGLPLNSHGELINFSSSVKVGLD------ 830
++FP MID ++PF+SW +G NS +PNFFGLPLNSHGELINFSS+ VG+D
Sbjct: 754 NMFPEDMIDKSYPFSSWGQGCIRNSCLDPNFFGLPLNSHGELINFSSNGNVGMDKINFSS 813
Query: 831 -------QPEXXXXXXXXXXALPIDNILHQSMQENLSINERHVVQKTFPKDGLNPFTQYS 883
Q E L +NIL QS QENLSINERH QKT KDG N Y
Sbjct: 814 NGNVGTNQLETSSPLGDSLSGLSSNNILCQSSQENLSINERHFGQKTLGKDGPNSLPNYP 873
Query: 884 SGLAFTRLPCSEREDIHRPKSDF-SSHYVQPLNPELLKQNSF-------RMQNHSGNGMV 935
LA T L CS+ EDIH P S+ SSH+VQPL+ E LK NS R+QNH+ NGMV
Sbjct: 874 PRLAVTEL-CSQTEDIHPPNSEMCSSHHVQPLHSEFLKHNSCVEQNQRERVQNHNRNGMV 932
Query: 936 SLKEGSDHISPSSSQPTVRLMGKDVPIGRSSQEMQQFATDVWTDEES-RRHYSQY-ALEN 993
SLKEGSDHISPSSSQPT+RLMGKDVPI RSSQE QQF VW+DEES RRHY++Y ALEN
Sbjct: 933 SLKEGSDHISPSSSQPTMRLMGKDVPIARSSQEPQQFTGVVWSDEESKRRHYAEYTALEN 992
Query: 994 SFLGRCPKQDWVSGSSSQVSTDNVLHSAKFQSNQGLMDGADSGFSQPFIDLQSNHASRNG 1053
S L RC K DWVSGSS Q+STD+VL S K QS GL + GF Q F D+QSNH S+NG
Sbjct: 993 SLLQRCSKPDWVSGSSLQISTDSVLQSEKIQSTHGLQ--STQGFPQQFTDMQSNHVSQNG 1050
Query: 1054 SLGISRNSSSYFNPITQDSTSYAVCNRAHEDFPERCIPGAKPPGMNCRSPVLPTPCNFDQ 1113
SLG+ RN+ SYFN I Q+STSY V N D E+ I G+KP + R VLPTPCNF+Q
Sbjct: 1051 SLGVGRNAGSYFNSIAQESTSYTVYNGTPNDSSEQFIAGSKPSVLCSRPQVLPTPCNFNQ 1110
Query: 1114 PTCSSNRELNDRNKNPLATKSAFGFPFLQPSVDEQAKTSWFQRPYGHLPSWLSSSPGEML 1173
PTCS N ELN RNKNP TKSAFGFPFLQP+ +EQAKT W Q PY WLSSS +ML
Sbjct: 1111 PTCSRNGELNGRNKNPHVTKSAFGFPFLQPAANEQAKTYWSQGPYRSDIVWLSSSTDDML 1170
Query: 1174 PGTFSQQFSGIRSQGFPQNQWGNNFVTPSVNHSAEVLYPSNPLTSRGPMKTSPPCPASFS 1233
GT+SQQFSG+ +Q FPQN+WGNNF+TPS NHS +VLY SNPL SRGPMKT+P CPAS
Sbjct: 1171 SGTYSQQFSGVANQSFPQNRWGNNFITPSPNHSTKVLYSSNPLISRGPMKTTPLCPASIV 1230
Query: 1234 HPLRPSVKSSTLNSGCRNINKVPDSVRLDDIITED-HHPCINTRKRPAVYLDDSRKHVKL 1292
+ SV +T+N+ RNINK D V LD ++ +D HHPC N RKRPA LDDSRK +K+
Sbjct: 1231 QSPQASVTHTTMNNVFRNINKAVDRVMLDGMVVKDHHHPCTNIRKRPADNLDDSRKPIKV 1290
Query: 1293 SSNMDVKESSGDITRLPGENSSVELQRSTTAVELDSQVDSARSRC----GQNLNPTSYPA 1348
SN++V+E+ + +L ENS+VELQ + AV LD QV+ ARSRC QNLNPTSYPA
Sbjct: 1291 -SNIEVRENMSRMPKLTRENSNVELQCNKRAVVLDPQVEIARSRCCQNVAQNLNPTSYPA 1349
Query: 1349 FDSFKMDGGTVTSGPLRLGPKRAKLILRSS 1378
DSFK + GT+ S P+RLGPKRAK IL+SS
Sbjct: 1350 VDSFKPN-GTIRSSPVRLGPKRAKHILKSS 1378
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 170/342 (49%), Gaps = 57/342 (16%)
Query: 1 MAARPDNGFSIREYTSKMRSIDVFKCWPFTSNINRELTREELQSWLPPMTLRCPRSEPLN 60
M +R D GFSIREYTSKMRSIDVFKCWPFTS N LTR++L SWLPPM+ CP N
Sbjct: 1 MDSRFD-GFSIREYTSKMRSIDVFKCWPFTSTSNPHLTRDQLHSWLPPMS-PCPSRSNQN 58
Query: 61 HHNKPEEPSRTRVEASRTVDVDSNEEESSKXXXXXXXXXXXXXXXXXXXXXXXXXEGGEA 120
H + ++ T + V + ++E +
Sbjct: 59 HQSSAQQQFSTIQSSKSDHPVRAEDDEKVE------------------------------ 88
Query: 121 MVCPVCREFNAATLTAVNAHIDGCLAQTXXXXXXXXXXXNLXXXXXXXXXXXX------- 173
M+CPVCREFNAATLTAVNAHIDGCLA++ N
Sbjct: 89 MICPVCREFNAATLTAVNAHIDGCLAESVRVERRHMRIINSKSKALKSFKSKSKSPKKRS 148
Query: 174 IAEIFXX------------XXXXXXXXXXXXXLKLWPLRXXXXXXXXXXXXXXXXXXXTV 221
IAEIF +KL L TV
Sbjct: 149 IAEIFKVEDKDRYIDQQHHQEKEKEAIQNESVMKLLQL-----PPEEEDVVQEDEVSITV 203
Query: 222 RKFQWLSNRLEALRSSRGDRESARLNAAXXXXXXXXXXXXCPVCRDFNAATVTAVNAHID 281
RKF+WLS RLEALRS G ESA+ + CPVC+DFNAATVTAVNAHID
Sbjct: 204 RKFRWLSQRLEALRSKPGGGESAK-ESEKLSIEEEKLEMICPVCKDFNAATVTAVNAHID 262
Query: 282 SCLAQAVRDERRQIKRSFPKLKPKAPKKRSIAEILTAAPPIE 323
SCL +AVRDERRQ R+ K KPKAPKKRSIAEIL PPIE
Sbjct: 263 SCLGKAVRDERRQTARTGFKSKPKAPKKRSIAEILNVVPPIE 304
>Medtr5g091810.1 | hypothetical protein | HC | chr5:40074210-40064781
| 20130731
Length = 1378
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/990 (58%), Positives = 677/990 (68%), Gaps = 49/990 (4%)
Query: 422 DLTKKKEDAYKRMVQTTVRSSRKLRGSTDNKSIALHDIDPSVHRKKLCLNGLSVRKKQEV 481
+ T+KKE A KR VQT V S RKLR + ++ AL DI+PSVHRKKL LNGLSV KK +V
Sbjct: 405 EFTRKKESANKREVQTDVNSCRKLRDTIGDEMGALQDIEPSVHRKKLGLNGLSVEKKPQV 464
Query: 482 KNCDSVGKQQKAVSSVGGIPKNHSKHVSGKTSSDCNSFQDGTEDSDYSDYNDQMPTSDRQ 541
KN +SVGK QKA S V GI +NH KHVSGK S+ C QDGTE+SD +Y DQ+ TSDR
Sbjct: 465 KNYNSVGKWQKADSPVRGIFRNHLKHVSGKISNAC-KIQDGTEESD--EY-DQVLTSDRH 520
Query: 542 VKFSGKADIHCEKERDSVDETMFNISSDAPATSSVKLQSSGSDEENASWGANRNYDHIAI 601
VKFS K +I ++R S DETMF+ SSDA ATS K QSSG+DEE +S+ AN+NYD IA+
Sbjct: 521 VKFSYKDEIVGPEKRYSFDETMFSTSSDALATSFAKEQSSGTDEECSSFEANKNYDQIAL 580
Query: 602 N--VDKEKSVCPIVESKQFVNTMEQVTVQSFLKPCTNQENXXXXXXXXXXXXXMAINDNN 659
N VDK + VCPI ESKQF T++QV +FLKPC NQE MA+ D+N
Sbjct: 581 NIEVDKREEVCPITESKQFSCTLKQVMGLNFLKPCINQEKANQLEQKSELLTKMAVYDDN 640
Query: 660 RLLHFDGGNTTTLLFSPYADMSRPLAAVKEDKTSGINTQVCESGSFSSSAKFIDHSEDPP 719
DGGN TT+ FS +PL+AV+E + N QV ESG FS KFID+SEDP
Sbjct: 641 NSQLLDGGNITTVNFS------KPLSAVQEGQMCAKNIQVSESGDFSFGGKFIDYSEDP- 693
Query: 720 TYQFGAVNKNGDTKTTLEHSSSYSVSYYKANENPEASLQTY---GDTDNSGHALGDRQLP 776
T+Q VNKN TKT LE SSSYS Y K NE PE+ + GD NS L D+QL
Sbjct: 694 TFQVDIVNKNASTKTLLEPSSSYSAPYGKVNEKPESPSPSSSYYGDNGNSNQTLDDKQLD 753
Query: 777 HVFPGSMIDNTFPFTSWSKGRDINSSSNPNFFGLPLNSHGELINFSSSVKVGLD------ 830
++FP MID ++PF+SW +G NS +PNFFGLPLNSHGELINFSS+ VG+D
Sbjct: 754 NMFPEDMIDKSYPFSSWGQGCIRNSCLDPNFFGLPLNSHGELINFSSNGNVGMDKINFSS 813
Query: 831 -------QPEXXXXXXXXXXALPIDNILHQSMQENLSINERHVVQKTFPKDGLNPFTQYS 883
Q E L +NIL QS QENLSINERH QKT KDG N Y
Sbjct: 814 NGNVGTNQLETSSPLGDSLSGLSSNNILCQSSQENLSINERHFGQKTLGKDGPNSLPNYP 873
Query: 884 SGLAFTRLPCSEREDIHRPKSDF-SSHYVQPLNPELLKQNSF-------RMQNHSGNGMV 935
LA T L CS+ EDIH P S+ SSH+VQPL+ E LK NS R+QNH+ NGMV
Sbjct: 874 PRLAVTEL-CSQTEDIHPPNSEMCSSHHVQPLHSEFLKHNSCVEQNQRERVQNHNRNGMV 932
Query: 936 SLKEGSDHISPSSSQPTVRLMGKDVPIGRSSQEMQQFATDVWTDEES-RRHYSQY-ALEN 993
SLKEGSDHISPSSSQPT+RLMGKDVPI RSSQE QQF VW+DEES RRHY++Y ALEN
Sbjct: 933 SLKEGSDHISPSSSQPTMRLMGKDVPIARSSQEPQQFTGVVWSDEESKRRHYAEYTALEN 992
Query: 994 SFLGRCPKQDWVSGSSSQVSTDNVLHSAKFQSNQGLMDGADSGFSQPFIDLQSNHASRNG 1053
S L RC K DWVSGSS Q+STD+VL S K QS GL + GF Q F D+QSNH S+NG
Sbjct: 993 SLLQRCSKPDWVSGSSLQISTDSVLQSEKIQSTHGLQ--STQGFPQQFTDMQSNHVSQNG 1050
Query: 1054 SLGISRNSSSYFNPITQDSTSYAVCNRAHEDFPERCIPGAKPPGMNCRSPVLPTPCNFDQ 1113
SLG+ RN+ SYFN I Q+STSY V N D E+ I G+KP + R VLPTPCNF+Q
Sbjct: 1051 SLGVGRNAGSYFNSIAQESTSYTVYNGTPNDSSEQFIAGSKPSVLCSRPQVLPTPCNFNQ 1110
Query: 1114 PTCSSNRELNDRNKNPLATKSAFGFPFLQPSVDEQAKTSWFQRPYGHLPSWLSSSPGEML 1173
PTCS N ELN RNKNP TKSAFGFPFLQP+ +EQAKT W Q PY WLSSS +ML
Sbjct: 1111 PTCSRNGELNGRNKNPHVTKSAFGFPFLQPAANEQAKTYWSQGPYRSDIVWLSSSTDDML 1170
Query: 1174 PGTFSQQFSGIRSQGFPQNQWGNNFVTPSVNHSAEVLYPSNPLTSRGPMKTSPPCPASFS 1233
GT+SQQFSG+ +Q FPQN+WGNNF+TPS NHS +VLY SNPL SRGPMKT+P CPAS
Sbjct: 1171 SGTYSQQFSGVANQSFPQNRWGNNFITPSPNHSTKVLYSSNPLISRGPMKTTPLCPASIV 1230
Query: 1234 HPLRPSVKSSTLNSGCRNINKVPDSVRLDDIITED-HHPCINTRKRPAVYLDDSRKHVKL 1292
+ SV +T+N+ RNINK D V LD ++ +D HHPC N RKRPA LDDSRK +K+
Sbjct: 1231 QSPQASVTHTTMNNVFRNINKAVDRVMLDGMVVKDHHHPCTNIRKRPADNLDDSRKPIKV 1290
Query: 1293 SSNMDVKESSGDITRLPGENSSVELQRSTTAVELDSQVDSARSRC----GQNLNPTSYPA 1348
SN++V+E+ + +L ENS+VELQ + AV LD QV+ ARSRC QNLNPTSYPA
Sbjct: 1291 -SNIEVRENMSRMPKLTRENSNVELQCNKRAVVLDPQVEIARSRCCQNVAQNLNPTSYPA 1349
Query: 1349 FDSFKMDGGTVTSGPLRLGPKRAKLILRSS 1378
DSFK + GT+ S P+RLGPKRAK IL+SS
Sbjct: 1350 VDSFKPN-GTIRSSPVRLGPKRAKHILKSS 1378
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 170/342 (49%), Gaps = 57/342 (16%)
Query: 1 MAARPDNGFSIREYTSKMRSIDVFKCWPFTSNINRELTREELQSWLPPMTLRCPRSEPLN 60
M +R D GFSIREYTSKMRSIDVFKCWPFTS N LTR++L SWLPPM+ CP N
Sbjct: 1 MDSRFD-GFSIREYTSKMRSIDVFKCWPFTSTSNPHLTRDQLHSWLPPMS-PCPSRSNQN 58
Query: 61 HHNKPEEPSRTRVEASRTVDVDSNEEESSKXXXXXXXXXXXXXXXXXXXXXXXXXEGGEA 120
H + ++ T + V + ++E +
Sbjct: 59 HQSSAQQQFSTIQSSKSDHPVRAEDDEKVE------------------------------ 88
Query: 121 MVCPVCREFNAATLTAVNAHIDGCLAQTXXXXXXXXXXXNLXXXXXXXXXXXX------- 173
M+CPVCREFNAATLTAVNAHIDGCLA++ N
Sbjct: 89 MICPVCREFNAATLTAVNAHIDGCLAESVRVERRHMRIINSKSKALKSFKSKSKSPKKRS 148
Query: 174 IAEIFXX------------XXXXXXXXXXXXXLKLWPLRXXXXXXXXXXXXXXXXXXXTV 221
IAEIF +KL L TV
Sbjct: 149 IAEIFKVEDKDRYIDQQHHQEKEKEAIQNESVMKLLQL-----PPEEEDVVQEDEVSITV 203
Query: 222 RKFQWLSNRLEALRSSRGDRESARLNAAXXXXXXXXXXXXCPVCRDFNAATVTAVNAHID 281
RKF+WLS RLEALRS G ESA+ + CPVC+DFNAATVTAVNAHID
Sbjct: 204 RKFRWLSQRLEALRSKPGGGESAK-ESEKLSIEEEKLEMICPVCKDFNAATVTAVNAHID 262
Query: 282 SCLAQAVRDERRQIKRSFPKLKPKAPKKRSIAEILTAAPPIE 323
SCL +AVRDERRQ R+ K KPKAPKKRSIAEIL PPIE
Sbjct: 263 SCLGKAVRDERRQTARTGFKSKPKAPKKRSIAEILNVVPPIE 304
>Medtr3g452530.1 | hypothetical protein | LC |
chr3:19216506-19211445 | 20130731
Length = 752
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 582 GSDEENASWGANRNYDHIAINVDKEKSVCPIVESKQFVNTMEQVTVQSFLKPCTNQENXX 641
G DE A+ N N ++IA N+ K K VCPI NT +V VQ+ LK C QE
Sbjct: 264 GPDEGTANLKVNTNDENIAKNMHKRKEVCPIE------NTRGEVAVQNILKSCAKQEKSK 317
Query: 642 XXXXXXXXXXXMAINDNNRLLHFDGGNTTTLLFSPYADMSRPLAAVKEDKTSGINTQVCE 701
++ +D+N L+ FD G+TT + FSP ++SRPL+A +E+ + INT+V +
Sbjct: 318 QPVKKCKSLSKVSFSDDN-LIQFDKGDTTKVHFSPDVELSRPLSAFQEEGINSINTEVVK 376
Query: 702 SGSFSSSA 709
S S SA
Sbjct: 377 SESSQPSA 384
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Query: 9 FSIREYTSKMRSIDVFKCWPFTSNINRELTREELQSWLPPMT 50
FS+R+Y++KMR+I+ F+CWPF S +LT+E++ S LPPMT
Sbjct: 3 FSMRDYSNKMRTINAFECWPFES--KEDLTQEKINSMLPPMT 42