Miyakogusa Predicted Gene

Lj2g3v3109520.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3109520.2 Non Characterized Hit- tr|E1ZC01|E1ZC01_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,26.85,7e-18,alpha/beta-Hydrolases,NULL; no description,NULL;
seg,NULL,CUFF.39756.2
         (348 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091790.1 | transmembrane protein, putative | HC | chr5:40...   559   e-159

>Medtr5g091790.1 | transmembrane protein, putative | HC |
           chr5:40055907-40054001 | 20130731
          Length = 358

 Score =  559 bits (1440), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/358 (75%), Positives = 306/358 (85%), Gaps = 11/358 (3%)

Query: 2   MLRRGHKSK----LWNSRVPVLAIS--LAFMXXXXXXXXXXHNDSDGE-----KPSLAYE 50
           ML  G+KSK      N R+ VL +S  L  M           ND+DG+     KPSLAYE
Sbjct: 1   MLNHGYKSKQRSSAHNCRIQVLVMSFILMLMLVILFFIFDNVNDNDGDVKVKVKPSLAYE 60

Query: 51  VSEQKWSSFDSLVKLHPTREFRNGTDLIWQVPESPKGVMFLAHGCNGRSINFWDKSPECP 110
             +Q W+SFDSLVK HPTREFRNGTDLIWQ+PESPKGV+FLAHGCNG++INFWDKS ECP
Sbjct: 61  SHKQIWNSFDSLVKFHPTREFRNGTDLIWQIPESPKGVLFLAHGCNGKAINFWDKSIECP 120

Query: 111 NCIGLPEERLLVLHGLAQGFAVITISSARTCWSFGKEVLVVKDILEWWIGRRKLEKLPLV 170
           NCIGLPEERLLVLHGLAQGFAVITISSA  CWSFGKE+LVVKDILEWWIG+RKLEKLPLV
Sbjct: 121 NCIGLPEERLLVLHGLAQGFAVITISSANRCWSFGKELLVVKDILEWWIGKRKLEKLPLV 180

Query: 171 ALGASSGGYFVSVLATAVKFNSIVIMIAEGMFEEMDVKEDYPPTLFVHMPKDLYRQQKID 230
           ALGASSGGYFVS+LA++ KFNSIV+MIAEGMF+E+D+ EDYPPTLFVHMPKDLYRQQKID
Sbjct: 181 ALGASSGGYFVSLLASSKKFNSIVLMIAEGMFDEIDINEDYPPTLFVHMPKDLYRQQKID 240

Query: 231 EYVEVLKGKGIDVGVVECMEFPLSPNTLADRIPGLDLTLSRSLFEIFQGKGFVDQNGYMR 290
           EYV VLK KGID GVVECMEFPLSP+TLADRIPG+D TLSR+LFEIF+ KGF+D+ GYMR
Sbjct: 241 EYVMVLKDKGIDAGVVECMEFPLSPDTLADRIPGIDQTLSRNLFEIFKEKGFIDEKGYMR 300

Query: 291 KDGRRIKWEKAVEEKKTLSLDKRLVPHIQEELNLAFASHEMTSIHSDQIFKWFESHMG 348
           KDGR++KW+  ++E+K L +DK L+PHIQEELNLAF+ HEMTS+HSDQIFKWFESH+G
Sbjct: 301 KDGRKMKWQNILDERKNLLIDKHLIPHIQEELNLAFSYHEMTSVHSDQIFKWFESHIG 358