Miyakogusa Predicted Gene

Lj2g3v3109470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3109470.1 tr|Q9LXR8|Q9LXR8_ARATH At3g58840 OS=Arabidopsis
thaliana GN=T20N10_190 PE=2 SV=1,31,3e-18,coiled-coil,NULL;
seg,NULL,CUFF.39736.1
         (305 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091710.1 | tropomyosin-like protein, putative | HC | chr5...   152   4e-37
Medtr5g008430.1 | transmembrane protein, putative | HC | chr5:17...    69   5e-12

>Medtr5g091710.1 | tropomyosin-like protein, putative | HC |
           chr5:40018589-40021260 | 20130731
          Length = 345

 Score =  152 bits (384), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 171/314 (54%), Gaps = 63/314 (20%)

Query: 1   MADDSFANGV-----EEESTSK---LERERDELVAENVAKKEQIKKLTAELEESR----- 47
           MADD  +NGV     E++S +K   LE+ERDELV EN  KKE+IKKLT E+EE R     
Sbjct: 35  MADDGVSNGVVDDQYEDQSVTKISALEKERDELVQENNEKKEEIKKLTLEMEELRSKGEE 94

Query: 48  ------KMTDVI-------------AARASDLETELSRLQHDMGSEMSAGEDARAKVAEL 88
                 +M DV+             AARA+DLET+++R+QHDM ++MSAGE+ + +   L
Sbjct: 95  MREKIEEMRDVVEKSQDSAKAAEVIAARAADLETQIARMQHDMITDMSAGEEMKKEAEGL 154

Query: 89  TKAVGDKESRIXXXXXXXXXXXXXXXXNEFLVKEVGELKKVAGENELKVRDFERKIGDLE 148
            + + DKE R+                 E LVKEV  LKKV  E+E +V+       DLE
Sbjct: 155 KEVLKDKEGRV-----------------EELVKEVEGLKKVKAESEARVK-------DLE 190

Query: 149 RKIGVFETKEVEERNKRIRVEEEVRDKIDYQDKEINLYXXXXXXXXXXXXXXXXXXXXXX 208
           ++IGV E KE+EERNKRIRVEEE+RD I  +D+EI+ +                      
Sbjct: 191 KRIGVLEMKEIEERNKRIRVEEELRDTIGEKDREIDGFRNKVEELEKVGAEKKDEAGDWL 250

Query: 209 XXXXXXVTSL-ESDVILLREEAGEAEKVIRLLSEKAGEAEKVIRSLNEKTVETVRSGVNG 267
                   +L ES+     E+A   E  I  L E+ GE+ K+I+SLNEK  E V   +NG
Sbjct: 251 NEKLSYEKALRESE-----EKAKGFESQIVQLLEEVGESGKMIKSLNEKAAEIVGREING 305

Query: 268 IHGDEGKGLNLQWP 281
           IHG+E K   LQWP
Sbjct: 306 IHGEE-KDFKLQWP 318


>Medtr5g008430.1 | transmembrane protein, putative | HC |
           chr5:1778111-1776914 | 20130731
          Length = 220

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 38/183 (20%)

Query: 1   MADDSFANGVEEESTSKLERERDELVAENVAKKEQIKKLTAELEESRKMTDVIAARASDL 60
           M DD    G  E+  + LE ER EL  EN+   E+I+K+  E+E+ RK +D  A    +L
Sbjct: 1   MGDDK---GSSEKIMAVLECERGELETENIKNNEEIEKMKTEIEKLRKNSDSTA----EL 53

Query: 61  ETELSRLQHDMGSEMSAGEDARAKVAELTKAVGDKESRIXXXXXXXXXXXXXXXXNEFLV 120
           E E +RL+ ++        +++ ++ +L K + +KE++I                 E + 
Sbjct: 54  EKEAARLRREVV-------ESKVEIEKLRKIIDEKENKI-----------------EIVE 89

Query: 121 KEVGELKKVAGENELKVRDFERKIGDLERKIGVFETKEVEERNKRIRVEEEVRDKIDYQD 180
           KE  ELK+   E E+KVR+       LER+IGV E KEVEE +KR+R+EEE+++KI  ++
Sbjct: 90  KEGKELKQENVEMEMKVRE-------LERRIGVIEMKEVEENSKRVRIEEEMKEKIYEKE 142

Query: 181 KEI 183
            E+
Sbjct: 143 MEV 145