Miyakogusa Predicted Gene
- Lj2g3v3106340.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3106340.2 tr|C1MMR2|C1MMR2_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3254,25.5,0.0000000000008,CROOKED NECK PROTEIN,NULL;
PRE-MRNA SPLICING FACTOR,NULL; TPR-like,NULL;
TPR_REGION,Tetratricopeptid,CUFF.39723.2
(414 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g009520.1 | cell cycle control protein crooked neck protei... 611 e-175
Medtr6g090890.1 | cell cycle control protein crooked neck protei... 579 e-165
Medtr4g118885.1 | crooked neck protein/cell cycle protein, putat... 218 9e-57
Medtr4g119010.1 | crooked neck protein/cell cycle protein, putat... 214 1e-55
Medtr4g011050.1 | crooked neck protein/cell cycle protein, putat... 146 4e-35
Medtr2g012310.1 | Pre-mRNA-splicing factor SYF1-like protein | H... 76 6e-14
Medtr1g011710.1 | pre-mRNA splicing factor-like protein | HC | c... 65 1e-10
Medtr7g068630.1 | pre-mRNA splicing factor-like protein | HC | c... 57 5e-08
Medtr7g068630.2 | pre-mRNA splicing factor-like protein | HC | c... 57 5e-08
Medtr7g068630.3 | pre-mRNA splicing factor-like protein | HC | c... 57 5e-08
Medtr4g122060.1 | PsbB mRNA maturation factor Mbb1 | HC | chr4:5... 52 2e-06
>Medtr5g009520.1 | cell cycle control protein crooked neck protein,
putative | HC | chr5:2293863-2287427 | 20130731
Length = 693
Score = 611 bits (1575), Expect = e-175, Method: Compositional matrix adjust.
Identities = 324/497 (65%), Positives = 348/497 (70%), Gaps = 84/497 (16%)
Query: 1 MSSSREGDPNLGYLTRKDTEVKLPRPTRVKNKTPAPIQITXXXXXXXXXXXXXXXXXPPK 60
MSSS++ DP LGYLTRKDTEVKLPRPTRVKNKTPAPIQIT PPK
Sbjct: 1 MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60
Query: 61 LKITDPHELGEYRLRKRKEFEDLIRRVRWNTSVWLKYAQWEVSQNDFKRAR--------- 111
KITD ELGEYRLRKRKEFEDLIRRVRWN SVW+KYAQWE SQ DF RAR
Sbjct: 61 QKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEV 120
Query: 112 -----SVWERALEVDYKNHTL--------------------------------------- 127
++W + EV+ KN +
Sbjct: 121 DYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQ 180
Query: 128 --------------WLKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLG 173
WL Y + E++ I AR +++R V PR+ W +Y E G
Sbjct: 181 VFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGA-WIRYAKFEMKNG 239
Query: 174 NVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAED 233
V R VYERAVE+LADDEEAE LFVAFAEFEERCKE+ERARCIYKFALDHIPKGRAED
Sbjct: 240 EVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAED 299
Query: 234 LYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEET------- 286
LYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEE+
Sbjct: 300 LYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERT 359
Query: 287 ---------NVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMIPHKKF 337
NVPPAEEK YWQRYIYLWINYALYEELDAGD+ERTR+VYKE LN IPH+KF
Sbjct: 360 REVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKF 419
Query: 338 SFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE 397
SFAK+WLLAAQFEIRQLNL GAR ILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE
Sbjct: 420 SFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE 479
Query: 398 KYLEWAPENCYAWSKYA 414
KYLEW+PENCYAWSKYA
Sbjct: 480 KYLEWSPENCYAWSKYA 496
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 164/357 (45%), Gaps = 49/357 (13%)
Query: 91 TSVWLKYAQWEVSQNDFKRARSVWERALEV---DYKNHTLWLKYAEVEMKNKFINHARNV 147
W++YA++E+ + +AR+V+ERA+E D + L++ +AE E + K AR +
Sbjct: 225 VGAWIRYAKFEMKNGEVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCI 284
Query: 148 WDRAVTLLP--RIDQLWYKYIHMEEMLGN-------VAGGRQV-YERAVERLADDEEAEQ 197
+ A+ +P R + L+ K++ E+ G+ + G R+ YE V + + ++
Sbjct: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDS-- 342
Query: 198 LFVAFAEFEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVG 257
+ + EE ER R +Y+ A+ ++P + +++++ Y E ++ +
Sbjct: 343 -WFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDME 401
Query: 258 KRRFQYEDEVRKNPLNYDS----WFDYIRLE--ETNVPPAEEKL-----------YWQRY 300
+ R Y++ + + P S W + E + N+ A + L +++Y
Sbjct: 402 RTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKY 461
Query: 301 IYLWINYALYEELDAGDVERTREVYKEGLNMIPHKKFSFAKMWLLAAQFEIRQLNLKGAR 360
I + EL G+++R R++Y++ L P ++++K A+ E + AR
Sbjct: 462 IEI--------ELQLGNIDRCRKLYEKYLEWSPENCYAWSKY----AELERSLAETERAR 509
Query: 361 LILGNAIGKAPKDK---IFKKYIEIELQLGNIDRCRKLYEKYLEWAPENCYAWSKYA 414
I AI + D ++K YI+ E +R R LYE+ L+ ++ W YA
Sbjct: 510 AIFELAIAQPALDMPELLWKAYIDFETAECEFERARALYERLLD-RTKHLKVWQSYA 565
>Medtr6g090890.1 | cell cycle control protein crooked neck protein,
putative | HC | chr6:34787428-34790984 | 20130731
Length = 695
Score = 579 bits (1493), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/497 (63%), Positives = 339/497 (68%), Gaps = 85/497 (17%)
Query: 1 MSSSREGDPNLGYLTRKDTEVKLPRPTRVKNKTPAPIQITXXXXXXXXXXXXXXXXXPPK 60
MSSS+ DP LGYLTRKDTEVKLPRPTRVKNKTPAPIQIT PPK
Sbjct: 1 MSSSKVADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60
Query: 61 LKITDPHELGEYRLRKRKEFEDLIRRVRWNTSVWLKYAQWEVSQNDFKRA---------- 110
KITD ELGEYRLRKRKEFEDLIRRVRWN SVW+KYAQWE SQ DF RA
Sbjct: 61 QKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEV 120
Query: 111 ------------------------RSVWERALE----VD---YK---------------- 123
R+VW+RA+ VD YK
Sbjct: 121 DYKNHTLWLKYAQVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARL 180
Query: 124 ----------NHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLG 173
+ WL Y + E++ I AR +++R V PR+ W +Y E G
Sbjct: 181 VFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGA-WIRYAKFEMKNG 239
Query: 174 NVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAED 233
V R VYERAVE LADDEEAE LFVAFAEFEERCKE RARCIYKFALDHIPKGRAE
Sbjct: 240 EVPKARIVYERAVE-LADDEEAELLFVAFAEFEERCKEVGRARCIYKFALDHIPKGRAEV 298
Query: 234 LYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEET------- 286
LYRKF AFEKQYGDREGIEDAIVGKRRFQYEDEV KNPLNYD WFDYIRLEE+
Sbjct: 299 LYRKFAAFEKQYGDREGIEDAIVGKRRFQYEDEVMKNPLNYDLWFDYIRLEESVGNKERT 358
Query: 287 ---------NVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMIPHKKF 337
NVP AEEK YWQRYIYLWINYALYEELDAGD+E+TR+VYKE LN IPH+KF
Sbjct: 359 REVYERAIANVPLAEEKRYWQRYIYLWINYALYEELDAGDMEQTRDVYKECLNQIPHQKF 418
Query: 338 SFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE 397
SFAK+WLLAAQFEIRQLNL G+R ILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE
Sbjct: 419 SFAKIWLLAAQFEIRQLNLTGSRQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE 478
Query: 398 KYLEWAPENCYAWSKYA 414
KYLEW PENCYAW KYA
Sbjct: 479 KYLEWTPENCYAWCKYA 495
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 162/354 (45%), Gaps = 44/354 (12%)
Query: 91 TSVWLKYAQWEVSQNDFKRARSVWERALEV--DYKNHTLWLKYAEVEMKNKFINHARNVW 148
W++YA++E+ + +AR V+ERA+E+ D + L++ +AE E + K + AR ++
Sbjct: 225 VGAWIRYAKFEMKNGEVPKARIVYERAVELADDEEAELLFVAFAEFEERCKEVGRARCIY 284
Query: 149 DRAVTLLP--RIDQLWYKYIHMEEMLGNVAG------GRQVYERAVERLADDEEAEQLFV 200
A+ +P R + L+ K+ E+ G+ G G++ ++ E + + + L+
Sbjct: 285 KFALDHIPKGRAEVLYRKFAAFEKQYGDREGIEDAIVGKRRFQYEDEVMKNPLNYD-LWF 343
Query: 201 AFAEFEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRR 260
+ EE ER R +Y+ A+ ++P + +++++ Y E ++ + + R
Sbjct: 344 DYIRLEESVGNKERTREVYERAIANVPLAEEKRYWQRYIYLWINYALYEELDAGDMEQTR 403
Query: 261 FQYEDEVRKNPLNYDSW---------FDYIRLEETN--------VPPAEEKLYWQRYIYL 303
Y++ + + P S+ F+ +L T + A + +++YI +
Sbjct: 404 DVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGSRQILGNAIGKAPKDKIFKKYIEI 463
Query: 304 WINYALYEELDAGDVERTREVYKEGLNMIPHKKFSFAKMWLLAAQFEIRQLNLKGARLIL 363
EL G+++R R++Y++ L P ++ W A+ E + AR I
Sbjct: 464 --------ELQLGNIDRCRKLYEKYLEWTPENCYA----WCKYAELERSLAETERARAIF 511
Query: 364 GNAIGKAPKDK---IFKKYIEIELQLGNIDRCRKLYEKYLEWAPENCYAWSKYA 414
AI + D ++K Y++ E +R R LYE+ L+ ++ W YA
Sbjct: 512 ELAIAQPALDMPELLWKAYVDFETVECEFERARVLYERLLD-RTKHLKVWMSYA 564
>Medtr4g118885.1 | crooked neck protein/cell cycle protein, putative
| HC | chr4:49276802-49275501 | 20130731
Length = 433
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 126/168 (75%), Gaps = 16/168 (9%)
Query: 263 YEDEVRKNPLNYDSWFDYIRLEET----------------NVPPAEEKLYWQRYIYLWIN 306
+E+EVR+NP NYDSWF+YIRLEE+ NVPP +EK+ W+RYIYL IN
Sbjct: 82 FENEVRENPFNYDSWFEYIRLEESVGDKEKTREVYERAISNVPPNQEKISWRRYIYLLIN 141
Query: 307 YALYEELDAGDVERTREVYKEGLNMIPHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNA 366
YA YEE D ++ER R+VY+ L ++ HKKFS AK+WLLAAQFEIR LN KGAR IL A
Sbjct: 142 YARYEEFDTRNMERARDVYRNFLKLMAHKKFSSAKLWLLAAQFEIRMLNFKGARRILDYA 201
Query: 367 IGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWAPENCYAWSKYA 414
IGKAPK K+FKKYIE+EL+LGN DRCRKLY YLEW+ + C AWSKYA
Sbjct: 202 IGKAPKHKLFKKYIEMELELGNTDRCRKLYVNYLEWSADKCKAWSKYA 249
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 133/336 (39%), Gaps = 68/336 (20%)
Query: 7 GDPNLGYLTRKDTEVKLPRPTRVKNKTPAPIQITXXXXXXXXXXXXXXXXXPPKLK---- 62
L Y R+DT+ KLPRPT KNKT APIQIT PK K
Sbjct: 2 SHSTLSYFPREDTQWKLPRPTMEKNKTDAPIQITTEKILIEAKELQETKICTPKQKCPRS 61
Query: 63 ITDPHELGEYRLR---KRKEFEDLIRRVRWNTSVWLKYAQWEVSQNDFKRARSVWERAL- 118
+++ +L L K FE+ +R +N W +Y + E S D ++ R V+ERA+
Sbjct: 62 VSEVDDLNHTLLNYSCKIVVFENEVRENPFNYDSWFEYIRLEESVGDKEKTREVYERAIS 121
Query: 119 -------------------------EVDYKNH----------------------TLWLKY 131
E D +N LWL
Sbjct: 122 NVPPNQEKISWRRYIYLLINYARYEEFDTRNMERARDVYRNFLKLMAHKKFSSAKLWLLA 181
Query: 132 AEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLAD 191
A+ E++ AR + D A+ P+ +L+ KYI ME LGN R++Y +E AD
Sbjct: 182 AQFEIRMLNFKGARRILDYAIGKAPK-HKLFKKYIEMELELGNTDRCRKLYVNYLEWSAD 240
Query: 192 DEEAEQLFVAFAE-FEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG 250
+A + +AE E E+ERAR I++ A+ + E ++ F FE + E
Sbjct: 241 KCKA---WSKYAEDLERSLSETERARAIFESAIARPELVKQELFWKAFHDFETAKCEFE- 296
Query: 251 IEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEET 286
+ R YE + + + W Y E T
Sbjct: 297 -------RTRVHYERIPNRKKQHLEIWISYAEFEAT 325
>Medtr4g119010.1 | crooked neck protein/cell cycle protein, putative
| HC | chr4:49280326-49279055 | 20130731
Length = 423
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 123/168 (73%), Gaps = 16/168 (9%)
Query: 263 YEDEVRKNPLNYDSWFDYIRLEET----------------NVPPAEEKLYWQRYIYLWIN 306
+E E R+NP NYDSW YIRLEE+ NVPP +EK+ W+ YI+L+I
Sbjct: 71 FEKEARENPFNYDSWLSYIRLEESVGDEEKTREVYERAISNVPPNQEKISWRSYIFLFIK 130
Query: 307 YALYEELDAGDVERTREVYKEGLNMIPHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNA 366
YALYEELDAGD+ER R+VY+ N++ HKK S AK+WLLAAQFEIR LN GAR ILG A
Sbjct: 131 YALYEELDAGDMERARDVYRRCFNLMAHKKISSAKLWLLAAQFEIRMLNFNGARRILGYA 190
Query: 367 IGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWAPENCYAWSKYA 414
IG APK ++FKKYIE+EL+LGN DRCR LY KYLEW+ + C AWSKYA
Sbjct: 191 IGIAPKHELFKKYIEMELELGNTDRCRNLYVKYLEWSAKKCNAWSKYA 238
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 128/325 (39%), Gaps = 66/325 (20%)
Query: 10 NLGYLTRKDTEVKLPRPTRVKNKTPAPIQITXXXXXXXXXXXXXXXXXPPKLKITDPHEL 69
L Y TR+DTEV PRPT V NKT APIQIT P++ + H L
Sbjct: 5 TLSYHTREDTEVNFPRPTTVNNKTDAPIQITTELILIEDKELQQIKL--PEVDYLN-HTL 61
Query: 70 GEYRLRKRKEFEDLIRRVRWNTSVWLKYAQWEVSQNDFKRARSVWERAL----------- 118
Y K FE R +N WL Y + E S D ++ R V+ERA+
Sbjct: 62 LNYPC-KIVAFEKEARENPFNYDSWLSYIRLEESVGDEEKTREVYERAISNVPPNQEKIS 120
Query: 119 ---------------EVD----------------------YKNHTLWLKYAEVEMKNKFI 141
E+D + LWL A+ E++
Sbjct: 121 WRSYIFLFIKYALYEELDAGDMERARDVYRRCFNLMAHKKISSAKLWLLAAQFEIRMLNF 180
Query: 142 NHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVA 201
N AR + A+ + P+ +L+ KYI ME LGN R +Y + +E A A +
Sbjct: 181 NGARRILGYAIGIAPK-HELFKKYIEMELELGNTDRCRNLYVKYLEWSAKKCNAWSKYA- 238
Query: 202 FAEFEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRF 261
E E E+ERAR I++ A I + E L++ F+ FE + E + R
Sbjct: 239 -EELERSSSETERARAIFESA---IARPEHELLWKAFLDFETAKIEFE--------RTRV 286
Query: 262 QYEDEVRKNPLNYDSWFDYIRLEET 286
YE + + + W Y E T
Sbjct: 287 HYERIPNRKKQHLEIWISYAEFEAT 311
>Medtr4g011050.1 | crooked neck protein/cell cycle protein, putative
| HC | chr4:2598431-2596012 | 20130731
Length = 161
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 192 DEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGI 251
D +++++ F +F ERC E+E A CIYKF +D+IPKGRAEDLY KFVAFEKQYGDREGI
Sbjct: 3 DYKSKEVSSYFMDFVERCNEAECAMCIYKFPIDYIPKGRAEDLYGKFVAFEKQYGDREGI 62
Query: 252 EDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEETNVPPAEEKLYWQRYIYLWINYALYE 311
EDAIVGKRR+ +++ N + + NVP A+E YWQ YIYL YALYE
Sbjct: 63 EDAIVGKRRW------KESVGNKERTMEVYERAIANVPLADENRYWQHYIYLC--YALYE 114
Query: 312 ELDAGDVERTREVYKE 327
EL+ GD+ERTR+VY E
Sbjct: 115 ELNVGDIERTRDVYSE 130
>Medtr2g012310.1 | Pre-mRNA-splicing factor SYF1-like protein | HC |
chr2:3026039-3032585 | 20130731
Length = 925
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 72/347 (20%)
Query: 82 DLIRRVRWNTSVWLKYAQWEVSQNDFKRARSVWERALEVDYKN----HTLWLKYAEVEMK 137
D ++ V ++W+ +A+ ND AR ++++A++V+YK ++W ++AE+E+K
Sbjct: 426 DPMKAVGRPHTLWVAFAKLYEEHNDLANARVIFDKAVQVNYKTVDNLASVWCEWAEIELK 485
Query: 138 NKFINHARNVWDRAVTLLPRID---------------------QLWYKYIHMEEMLGNVA 176
++ A ++ RA T P ++ +LW ++ +EE LG++
Sbjct: 486 HENFKGALDLMRRA-TAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFFVDLEESLGSLE 544
Query: 177 GGRQVYERAVE-RLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAEDLY 235
R+VYER ++ R+A Q+ + +A F E K E A +Y+ + +D++
Sbjct: 545 STREVYERILDLRIA----TPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIW 600
Query: 236 RKFVA-FEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEETNVPPAEEK 294
+++ F K+YG R +E A R +E+ V P + V P
Sbjct: 601 VTYLSKFVKRYG-RTKLERA-----RELFENAVETAPAD-------------QVKP---- 637
Query: 295 LYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMIP-HKKFSFAKMWLLAAQFEIRQ 353
L++ YA EE D G +R +VY + +P ++K S ++++ A EI
Sbjct: 638 --------LYLQYAKLEE-DYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAA-EI-- 685
Query: 354 LNLKGARLILGNAIGKAPKDKIFK----KYIEIELQLGNIDRCRKLY 396
+ R I AI DK K KY E+E LG I+R R +Y
Sbjct: 686 FGVPKTREIYEQAIESGLPDKDVKTMCLKYAELERSLGEIERARGVY 732
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 93 VWLKYAQWEV---SQNDFKRARSVWERALEVDYKNHT--LWLKYAEVEMKNKFINHARNV 147
+W+ Y V + +RAR ++E A+E + L+L+YA++E A V
Sbjct: 599 IWVTYLSKFVKRYGRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKV 658
Query: 148 WDRAVTLLPRIDQL--WYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEF 205
+D+A +P ++L + YI + V R++YE+A+E D++ + + + +AE
Sbjct: 659 YDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAEL 718
Query: 206 EERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 259
E E ERAR +Y FA D + + FE Q+G+ + + + KR
Sbjct: 719 ERSLGEIERARGVYVFASKFADPRSDPDFWNDWHEFEVQHGNEDTFREMLRIKR 772
>Medtr1g011710.1 | pre-mRNA splicing factor-like protein | HC |
chr1:2191122-2188299 | 20130731
Length = 895
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 34/321 (10%)
Query: 93 VWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W+ A+ ++ + AR++++ AL V ++W+K A++E + + RAV
Sbjct: 482 TWVADAEECEKRDSIETARAIYDHALNVFLTKKSIWIKAAQLERSHGTRESFDGLLRRAV 541
Query: 153 TLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKES 212
T +P+++ LW + + G+V R + + A + + EE L++A + E E
Sbjct: 542 TYIPQVEVLWLMLAKEKWLAGDVPAARALLQEAYAAIPNSEE---LWLAAFKLEFENHEP 598
Query: 213 ERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPL 272
ERAR + A D I G E ++ K E++ G+ E + R + +++ P
Sbjct: 599 ERARMLLAKARDQI--GGTERVWMKSAIVERELGNVE--------EERRMLNEGLKQFPS 648
Query: 273 NYDSWFDYIRLEETNVPPAE-EKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNM 331
Y W +LEE + + +R+ ++ ++VY+ G
Sbjct: 649 FYKLWLMLGQLEERLAKTTKRQDQPEKRHSHMMT---------------AKKVYESGQKN 693
Query: 332 IPHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKD-KIFKKYIEIELQLGNID 390
P+ +WL A E L R+I A K P++ +++ I EL+ G
Sbjct: 694 CPNS----VPLWLSLANLEEEMNGLSKVRVIFTMARKKNPQNPELWLAAIRAELKHGYKK 749
Query: 391 RCRKLYEKYLEWAPENCYAWS 411
L K L+ P + W+
Sbjct: 750 EADTLMAKALQECPNSGILWA 770
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 39/310 (12%)
Query: 110 ARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHME 169
AR + RA+E + LWL A +E ++A+ V ++A++ LP+ +W +E
Sbjct: 362 ARLLLHRAVECCPLHAELWLALARLET----YDNAKIVLNKALSRLPKEATIWIAMAKLE 417
Query: 170 EMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKG 229
E GN + ++A+E E ++ AE ER E R I K + I G
Sbjct: 418 EANGNTDKVGKRIQKALEEGGVVINRET-WMKEAEVAERGGSIETCRAIIK---NTIGIG 473
Query: 230 -RAEDLYRKFVAFEKQYGDREGIEDA-----------IVGKRRFQYEDEVRKNPLNYDSW 277
ED R +VA ++ R+ IE A + K + ++ ++ +S+
Sbjct: 474 VEEEDRKRTWVADAEECEKRDSIETARAIYDHALNVFLTKKSIWIKAAQLERSHGTRESF 533
Query: 278 FDYIRLEETNVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMIPHKKF 337
+R T +P E LW+ A E+ AGDV R + +E IP+ +
Sbjct: 534 DGLLRRAVTYIPQVE---------VLWLMLA-KEKWLAGDVPAARALLQEAYAAIPNSE- 582
Query: 338 SFAKMWLLAAQFEIRQLNLKGARLILGNA---IGKAPKDKIFKKYIEIELQLGNIDRCRK 394
++WL A + E + AR++L A IG ++++ K +E +LGN++ R+
Sbjct: 583 ---ELWLAAFKLEFENHEPERARMLLAKARDQIGGT--ERVWMKSAIVERELGNVEEERR 637
Query: 395 LYEKYLEWAP 404
+ + L+ P
Sbjct: 638 MLNEGLKQFP 647
>Medtr7g068630.1 | pre-mRNA splicing factor-like protein | HC |
chr7:25167319-25162067 | 20130731
Length = 1054
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 136/320 (42%), Gaps = 33/320 (10%)
Query: 93 VWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W+ A+ + + AR++++ AL V ++W+K A++E + ++ +AV
Sbjct: 633 TWVADAEECKKRGSIETARAIYDHALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAV 692
Query: 153 TLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKES 212
T P+ + LW + + G+V R + + A + + EE +++A + E E
Sbjct: 693 TYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE---IWLAAFKLEFENHEP 749
Query: 213 ERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPL 272
ERAR + A + +G E ++ K E++ G+ E + R + +++ P
Sbjct: 750 ERARMLLAKARE---RGGTERVWMKSAIVERELGNIE--------EERKLLNEGLKQFPS 798
Query: 273 NYDSWFDYIRLEETNVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMI 332
+ W +LEE A+++ ++ +++A ++VY GL
Sbjct: 799 FFKLWLMLGQLEERLAEAAKQQDQTEKQ--------HSHKMEA------KKVYDSGLKSC 844
Query: 333 PHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKD-KIFKKYIEIELQLGNIDR 391
P+ +WL A E L AR L A + P++ +++ + EL+ G
Sbjct: 845 PNS----VPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900
Query: 392 CRKLYEKYLEWAPENCYAWS 411
L K L+ P + W+
Sbjct: 901 ADILMAKALQECPNSGILWA 920
>Medtr7g068630.2 | pre-mRNA splicing factor-like protein | HC |
chr7:25167319-25161996 | 20130731
Length = 1054
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 136/320 (42%), Gaps = 33/320 (10%)
Query: 93 VWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W+ A+ + + AR++++ AL V ++W+K A++E + ++ +AV
Sbjct: 633 TWVADAEECKKRGSIETARAIYDHALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAV 692
Query: 153 TLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKES 212
T P+ + LW + + G+V R + + A + + EE +++A + E E
Sbjct: 693 TYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE---IWLAAFKLEFENHEP 749
Query: 213 ERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPL 272
ERAR + A + +G E ++ K E++ G+ E + R + +++ P
Sbjct: 750 ERARMLLAKARE---RGGTERVWMKSAIVERELGNIE--------EERKLLNEGLKQFPS 798
Query: 273 NYDSWFDYIRLEETNVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMI 332
+ W +LEE A+++ ++ +++A ++VY GL
Sbjct: 799 FFKLWLMLGQLEERLAEAAKQQDQTEKQ--------HSHKMEA------KKVYDSGLKSC 844
Query: 333 PHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKD-KIFKKYIEIELQLGNIDR 391
P+ +WL A E L AR L A + P++ +++ + EL+ G
Sbjct: 845 PNS----VPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900
Query: 392 CRKLYEKYLEWAPENCYAWS 411
L K L+ P + W+
Sbjct: 901 ADILMAKALQECPNSGILWA 920
>Medtr7g068630.3 | pre-mRNA splicing factor-like protein | HC |
chr7:25167319-25162067 | 20130731
Length = 1054
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 136/320 (42%), Gaps = 33/320 (10%)
Query: 93 VWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W+ A+ + + AR++++ AL V ++W+K A++E + ++ +AV
Sbjct: 633 TWVADAEECKKRGSIETARAIYDHALSVFLTKKSIWIKAAQLERSHGTRETLDSLLRKAV 692
Query: 153 TLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKES 212
T P+ + LW + + G+V R + + A + + EE +++A + E E
Sbjct: 693 TYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE---IWLAAFKLEFENHEP 749
Query: 213 ERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPL 272
ERAR + A + +G E ++ K E++ G+ E + R + +++ P
Sbjct: 750 ERARMLLAKARE---RGGTERVWMKSAIVERELGNIE--------EERKLLNEGLKQFPS 798
Query: 273 NYDSWFDYIRLEETNVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKEGLNMI 332
+ W +LEE A+++ ++ +++A ++VY GL
Sbjct: 799 FFKLWLMLGQLEERLAEAAKQQDQTEKQ--------HSHKMEA------KKVYDSGLKSC 844
Query: 333 PHKKFSFAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKD-KIFKKYIEIELQLGNIDR 391
P+ +WL A E L AR L A + P++ +++ + EL+ G
Sbjct: 845 PNS----VPLWLSLANLEEEMSGLSKARAALTMARKRNPQNPELWLAAVRAELKHGYKKE 900
Query: 392 CRKLYEKYLEWAPENCYAWS 411
L K L+ P + W+
Sbjct: 901 ADILMAKALQECPNSGILWA 920
>Medtr4g122060.1 | PsbB mRNA maturation factor Mbb1 | HC |
chr4:50401178-50394986 | 20130731
Length = 670
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 34/169 (20%)
Query: 90 NTSVWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLW--------------------- 128
+ + WL +AQ EV Q +++ AR ++E A++ KN W
Sbjct: 322 SCASWLAWAQMEVEQENYRIARKLFENAVQASPKNRFAWHVWGIFEANLGKIDKGRKLLK 381
Query: 129 -------------LKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNV 175
A +E K+ N AR ++ RA L P+ +W+ + ME GN+
Sbjct: 382 IGHALNPRDAVLLQSLALIEYKHSSANRARVLFKRASELDPKHQPVWFAWGWMEWKEGNL 441
Query: 176 AGGRQVYERAVERLADDEEAEQLFVAFAEFEERCKESERARCIYKFALD 224
R++Y +A+ + E A + A+ E+R AR +++ +L+
Sbjct: 442 NTARELYRKALSIDQNSESAARCLQAWGVLEQRVGNLLAARRLFRSSLN 490
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 90 NTSVWLKYAQWEVSQNDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWD 149
N ++ A E N +++AR ++ +A + K+ WL +A++E++ + AR +++
Sbjct: 288 NEYIYQTLALLEAKANRYQQARYLFNQATRCNPKSCASWLAWAQMEVEQENYRIARKLFE 347
Query: 150 RAVTLLPRIDQLWYKYIHMEEMLGNVAGGRQVYERAVERLADDEEAEQLFVAFAEFEERC 209
AV P+ W+ + E LG + GR++ + + + +A L + A E +
Sbjct: 348 NAVQASPKNRFAWHVWGIFEANLGKIDKGRKLLK--IGHALNPRDA-VLLQSLALIEYKH 404
Query: 210 KESERARCIYKFALDHIPK------------------GRAEDLYRKFVAFEKQ------- 244
+ RAR ++K A + PK A +LYRK ++ ++
Sbjct: 405 SSANRARVLFKRASELDPKHQPVWFAWGWMEWKEGNLNTARELYRKALSIDQNSESAARC 464
Query: 245 ---YGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEETNVPP--AEE--KLYW 297
+G E ++ RR + + N +Y +W + LEE P AEE LY+
Sbjct: 465 LQAWGVLEQRVGNLLAARRL-FRSSLNINSQSYVTWMTWASLEEDQGNPVRAEEIRNLYF 523
Query: 298 QR 299
Q+
Sbjct: 524 QQ 525