Miyakogusa Predicted Gene
- Lj2g3v3106140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3106140.1 Non Characterized Hit- tr|D5ACZ6|D5ACZ6_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,34.38,3e-17,Sas10_Utp3,Sas10/Utp3/C1D,CUFF.39715.1
(180 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g014130.1 | Sas10/Utp3/C1D family protein | HC | chr1:3109... 195 2e-50
Medtr3g105925.3 | Sas10/Utp3/C1D family protein | HC | chr3:4885... 155 2e-38
Medtr3g105925.2 | Sas10/Utp3/C1D family protein | HC | chr3:4885... 155 2e-38
Medtr3g105925.4 | Sas10/Utp3/C1D family protein | HC | chr3:4885... 155 2e-38
Medtr3g105925.1 | Sas10/Utp3/C1D family protein | HC | chr3:4885... 155 2e-38
>Medtr1g014130.1 | Sas10/Utp3/C1D family protein | HC |
chr1:3109176-3113524 | 20130731
Length = 186
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 132/182 (72%), Gaps = 13/182 (7%)
Query: 1 MVKASEIDGVTV--PEAT-IESLNRTLHSVEQLEAQLPEFLSLSDPELLEQMPLLHRAHS 57
MVK +EI+ VTV PE+T IESL RTL++VEQL++QLPEFL+LSDP+ L +PLL RAHS
Sbjct: 1 MVKPNEIENVTVQQPESTTIESLKRTLYNVEQLQSQLPEFLALSDPDHLSTLPLLQRAHS 60
Query: 58 LFSLAKLTSTLFSLKLRCRGINPNDHPFKSELDRISKFQKKLELLPRLSEAQRQDMRNTS 117
LFSLAKLTSTLF LKL+CRGINPNDH FKSELDR+S QK+LE LP LSE Q QDM
Sbjct: 61 LFSLAKLTSTLFELKLKCRGINPNDHAFKSELDRLSVCQKRLERLPDLSEEQWQDMVEQK 120
Query: 118 RGEGPNMNCEEQAGQKRKYTSSEEQSAQTGAKEFLEKETGELRVDNRGNS---KEAIVID 174
EEQ GQKRKY SSEEQ +KE++EK GE V + KEAI+ID
Sbjct: 121 FY-------EEQTGQKRKYPSSEEQFDLIDSKEYVEKLPGEDVVGGSSSGSSIKEAIIID 173
Query: 175 IS 176
+S
Sbjct: 174 LS 175
>Medtr3g105925.3 | Sas10/Utp3/C1D family protein | HC |
chr3:48850057-48852759 | 20130731
Length = 228
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 123/211 (58%), Gaps = 31/211 (14%)
Query: 1 MVKASEIDGVT-VPEATIESLNRTLHSVEQLEAQLPEFLSLSDPELLEQMPLLHRAHSLF 59
MVK SE + VPEA ++S+N TL ++ + + +FL L +P++L Q+P L RAHSLF
Sbjct: 1 MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60
Query: 60 SLAKLTSTLFSLKLRCRGINPNDHPFKSELDRISKFQKKLEL------------------ 101
L+K+TSTL +LKLRC G+ P+D+P KSELDR+ +Q KLE
Sbjct: 61 LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120
Query: 102 ---------LPRLSEAQRQDMRNTSRGEGPNMNCEEQAGQKRKYTSSEEQ--SAQTGAKE 150
LP L+ Q Q MRN SRGEG +EQAGQKRKY SSE+ S Q A+E
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180
Query: 151 FLEKETGELRVDNRGNSKEAIVID-ISDDDD 180
FLEK EL N G K + ID +S+ DD
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDD 211
>Medtr3g105925.2 | Sas10/Utp3/C1D family protein | HC |
chr3:48850027-48853697 | 20130731
Length = 228
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 123/211 (58%), Gaps = 31/211 (14%)
Query: 1 MVKASEIDGVT-VPEATIESLNRTLHSVEQLEAQLPEFLSLSDPELLEQMPLLHRAHSLF 59
MVK SE + VPEA ++S+N TL ++ + + +FL L +P++L Q+P L RAHSLF
Sbjct: 1 MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60
Query: 60 SLAKLTSTLFSLKLRCRGINPNDHPFKSELDRISKFQKKLEL------------------ 101
L+K+TSTL +LKLRC G+ P+D+P KSELDR+ +Q KLE
Sbjct: 61 LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120
Query: 102 ---------LPRLSEAQRQDMRNTSRGEGPNMNCEEQAGQKRKYTSSEEQ--SAQTGAKE 150
LP L+ Q Q MRN SRGEG +EQAGQKRKY SSE+ S Q A+E
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180
Query: 151 FLEKETGELRVDNRGNSKEAIVID-ISDDDD 180
FLEK EL N G K + ID +S+ DD
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDD 211
>Medtr3g105925.4 | Sas10/Utp3/C1D family protein | HC |
chr3:48850124-48852790 | 20130731
Length = 228
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 123/211 (58%), Gaps = 31/211 (14%)
Query: 1 MVKASEIDGVT-VPEATIESLNRTLHSVEQLEAQLPEFLSLSDPELLEQMPLLHRAHSLF 59
MVK SE + VPEA ++S+N TL ++ + + +FL L +P++L Q+P L RAHSLF
Sbjct: 1 MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60
Query: 60 SLAKLTSTLFSLKLRCRGINPNDHPFKSELDRISKFQKKLEL------------------ 101
L+K+TSTL +LKLRC G+ P+D+P KSELDR+ +Q KLE
Sbjct: 61 LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120
Query: 102 ---------LPRLSEAQRQDMRNTSRGEGPNMNCEEQAGQKRKYTSSEEQ--SAQTGAKE 150
LP L+ Q Q MRN SRGEG +EQAGQKRKY SSE+ S Q A+E
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180
Query: 151 FLEKETGELRVDNRGNSKEAIVID-ISDDDD 180
FLEK EL N G K + ID +S+ DD
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDD 211
>Medtr3g105925.1 | Sas10/Utp3/C1D family protein | HC |
chr3:48850124-48853633 | 20130731
Length = 228
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 123/211 (58%), Gaps = 31/211 (14%)
Query: 1 MVKASEIDGVT-VPEATIESLNRTLHSVEQLEAQLPEFLSLSDPELLEQMPLLHRAHSLF 59
MVK SE + VPEA ++S+N TL ++ + + +FL L +P++L Q+P L RAHSLF
Sbjct: 1 MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60
Query: 60 SLAKLTSTLFSLKLRCRGINPNDHPFKSELDRISKFQKKLEL------------------ 101
L+K+TSTL +LKLRC G+ P+D+P KSELDR+ +Q KLE
Sbjct: 61 LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120
Query: 102 ---------LPRLSEAQRQDMRNTSRGEGPNMNCEEQAGQKRKYTSSEEQ--SAQTGAKE 150
LP L+ Q Q MRN SRGEG +EQAGQKRKY SSE+ S Q A+E
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180
Query: 151 FLEKETGELRVDNRGNSKEAIVID-ISDDDD 180
FLEK EL N G K + ID +S+ DD
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDD 211