Miyakogusa Predicted Gene

Lj2g3v3103790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3103790.1 tr|G7KD42|G7KD42_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula GN=MTR_5g09,94.09,0,seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; CONSERVED OLIGOMERIC GOLGI
COMPLEX COMPONENT 5,NODE_13046_length_2215_cov_144.518280.path2.1
         (559 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091250.2 | transport complex-like protein | HC | chr5:397...  1005   0.0  
Medtr5g091250.1 | transport complex-like protein | HC | chr5:397...  1005   0.0  

>Medtr5g091250.2 | transport complex-like protein | HC |
           chr5:39772704-39766993 | 20130731
          Length = 826

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/558 (87%), Positives = 505/558 (90%)

Query: 1   MGAKSVSVALDMKAITXXXXXXXXXXXXXXXXXXXXXXXVKAREALWQRLGTCMDQLHSI 60
           MGAKSVSVALDMKAIT                        KAREALWQRLG CMDQLHSI
Sbjct: 268 MGAKSVSVALDMKAITGSSGSGFGPGGIRGTGTPQIGGGGKAREALWQRLGNCMDQLHSI 327

Query: 61  AVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF 120
            VAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF
Sbjct: 328 TVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF 387

Query: 121 VKEIFTMGYPKLYSMIENLLERITRDTDVKGVLPAISSGGKDQMVSAVEIFQSAFLGHCL 180
           VKEIFTMGYPKLYSMIENLLE+I+RDTDVKGVLPAI+S GK+Q+VSAVEIFQSAFLGHCL
Sbjct: 388 VKEIFTMGYPKLYSMIENLLEKISRDTDVKGVLPAITSTGKEQIVSAVEIFQSAFLGHCL 447

Query: 181 SRLSDLVNSVFPMSSRGSVPSKXXXXXXXXXXXXXXXAVQMDARLTLLVLREIGKVLLLL 240
           SRLSDLVN+VFPMSSRGSVPS+               AVQMDARLTLLVLREIGKVLLL 
Sbjct: 448 SRLSDLVNNVFPMSSRGSVPSREQISRIISRIQEEIEAVQMDARLTLLVLREIGKVLLLF 507

Query: 241 AERTEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHARISTMLKGMPSIAADVLSAS 300
           AER EYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVH+RIS+MLKGMPSIAADVLSAS
Sbjct: 508 AERAEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHSRISSMLKGMPSIAADVLSAS 567

Query: 301 LGAIYGVACDSVTSLFQAMLDRLESCILQIHDHNFGVLGMDAAMDNNASPYMEELQKCIL 360
           LGAIYGVACDSVTSLFQ+MLDRLESCILQIHDHNFG+LGMDAAMDNNASPYMEELQKCIL
Sbjct: 568 LGAIYGVACDSVTSLFQSMLDRLESCILQIHDHNFGMLGMDAAMDNNASPYMEELQKCIL 627

Query: 361 HFRSEFLSKLLPSRATTAKGTENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR 420
           HFRSEFLSKLLPSR T   G ENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR
Sbjct: 628 HFRSEFLSKLLPSRKTATPGVENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR 687

Query: 421 DMAELELAVGQNLFPVEQLGAPYRALRSFRPLIFLETSQLASSPLLQDLPPNVILHHLYT 480
           DMAELELAVGQNLFPVEQLGAPYRALR+FRPLIFLETSQLASSPLLQDLPPNVILHHLYT
Sbjct: 688 DMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLASSPLLQDLPPNVILHHLYT 747

Query: 481 RGPEDLQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAINVRSRGDKEFSPVYP 540
           RGPE+LQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYA NVRSR DKEFSPVYP
Sbjct: 748 RGPEELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAANVRSRRDKEFSPVYP 807

Query: 541 LMLQLGSTLTEKIQASSK 558
           LM+QLGS+LTEK +ASS 
Sbjct: 808 LMIQLGSSLTEKTKASSN 825


>Medtr5g091250.1 | transport complex-like protein | HC |
           chr5:39772704-39766102 | 20130731
          Length = 826

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/558 (87%), Positives = 505/558 (90%)

Query: 1   MGAKSVSVALDMKAITXXXXXXXXXXXXXXXXXXXXXXXVKAREALWQRLGTCMDQLHSI 60
           MGAKSVSVALDMKAIT                        KAREALWQRLG CMDQLHSI
Sbjct: 268 MGAKSVSVALDMKAITGSSGSGFGPGGIRGTGTPQIGGGGKAREALWQRLGNCMDQLHSI 327

Query: 61  AVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF 120
            VAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF
Sbjct: 328 TVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIAKAFASQMKSAFTASSF 387

Query: 121 VKEIFTMGYPKLYSMIENLLERITRDTDVKGVLPAISSGGKDQMVSAVEIFQSAFLGHCL 180
           VKEIFTMGYPKLYSMIENLLE+I+RDTDVKGVLPAI+S GK+Q+VSAVEIFQSAFLGHCL
Sbjct: 388 VKEIFTMGYPKLYSMIENLLEKISRDTDVKGVLPAITSTGKEQIVSAVEIFQSAFLGHCL 447

Query: 181 SRLSDLVNSVFPMSSRGSVPSKXXXXXXXXXXXXXXXAVQMDARLTLLVLREIGKVLLLL 240
           SRLSDLVN+VFPMSSRGSVPS+               AVQMDARLTLLVLREIGKVLLL 
Sbjct: 448 SRLSDLVNNVFPMSSRGSVPSREQISRIISRIQEEIEAVQMDARLTLLVLREIGKVLLLF 507

Query: 241 AERTEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHARISTMLKGMPSIAADVLSAS 300
           AER EYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVH+RIS+MLKGMPSIAADVLSAS
Sbjct: 508 AERAEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHSRISSMLKGMPSIAADVLSAS 567

Query: 301 LGAIYGVACDSVTSLFQAMLDRLESCILQIHDHNFGVLGMDAAMDNNASPYMEELQKCIL 360
           LGAIYGVACDSVTSLFQ+MLDRLESCILQIHDHNFG+LGMDAAMDNNASPYMEELQKCIL
Sbjct: 568 LGAIYGVACDSVTSLFQSMLDRLESCILQIHDHNFGMLGMDAAMDNNASPYMEELQKCIL 627

Query: 361 HFRSEFLSKLLPSRATTAKGTENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR 420
           HFRSEFLSKLLPSR T   G ENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR
Sbjct: 628 HFRSEFLSKLLPSRKTATPGVENICTRLVQSMASRVLVFFIRHASLVRPLSESGKLRMAR 687

Query: 421 DMAELELAVGQNLFPVEQLGAPYRALRSFRPLIFLETSQLASSPLLQDLPPNVILHHLYT 480
           DMAELELAVGQNLFPVEQLGAPYRALR+FRPLIFLETSQLASSPLLQDLPPNVILHHLYT
Sbjct: 688 DMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLASSPLLQDLPPNVILHHLYT 747

Query: 481 RGPEDLQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAINVRSRGDKEFSPVYP 540
           RGPE+LQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYA NVRSR DKEFSPVYP
Sbjct: 748 RGPEELQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDYAANVRSRRDKEFSPVYP 807

Query: 541 LMLQLGSTLTEKIQASSK 558
           LM+QLGS+LTEK +ASS 
Sbjct: 808 LMIQLGSSLTEKTKASSN 825