Miyakogusa Predicted Gene

Lj2g3v3084350.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3084350.2 Non Characterized Hit- tr|A5C0V1|A5C0V1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.23,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Apc5,Anaphase-promoting complex subunit 5,CUFF.39690.2
         (570 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC | ch...   867   0.0  

>Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC |
           chr5:39660837-39673775 | 20130731
          Length = 922

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/571 (75%), Positives = 469/571 (82%), Gaps = 12/571 (2%)

Query: 1   MAGILKQPGAFAVTPHKVSLCILLKIYXXXXXXXXXXXXXXXXXXXXXXXXXXHHNRLAL 60
           M+ +LKQPGAF +TPHKVSLCILLKIY                           HNRL L
Sbjct: 1   MSVMLKQPGAFTITPHKVSLCILLKIYAPPGQVSVPFPFESVA----------QHNRLGL 50

Query: 61  FLLALTKSCDDILEPRLDELIHQLRIVSQNWEAASWVIDQLMXXXXXXXXXXXXXXXXXX 120
           F+LALTKSCDDILEP+L+ELI QLR++SQNWEA +W+IDQL+                  
Sbjct: 51  FILALTKSCDDILEPKLEELISQLRLISQNWEA-TWLIDQLISRLSCLSSPDDLFNFFTD 109

Query: 121 IRGILGGPDSGAVEDDQAILDMNSNLGLFLRRCILAFNLLSFEGICYLLTSIGIYTKE-F 179
           IRGI+GGPDSG +E DQ ILD NSNLG+FLRRCILAFNLL FEG+C LLT+IGIY KE F
Sbjct: 110 IRGIIGGPDSGDIEADQVILDANSNLGIFLRRCILAFNLLPFEGVCRLLTNIGIYCKEEF 169

Query: 180 SNCPPYEERSLDDSSSNLETYSEYENMDLENFVYEKVSEEIEARKEASERVPFHLHTPDT 239
           S+ PPYEE SLD SSSNLETYSEYENMDLENF Y+KVSEEIEARKEAS RVPFHLHTP+ 
Sbjct: 170 SSIPPYEETSLDGSSSNLETYSEYENMDLENFFYDKVSEEIEARKEASGRVPFHLHTPNA 229

Query: 240 LLSLVDDIDVPADSVSKQSEKFRVASPYGDPPSNMLRDIDSSGFVSLRTNWQIQGYLQEQ 299
           LLSLVDDIDVPADS SKQS+K RV SPY D  SNM+RDID SG V LRTNWQIQGYLQE 
Sbjct: 230 LLSLVDDIDVPADSASKQSDKLRVGSPYEDRHSNMVRDIDPSGAVFLRTNWQIQGYLQEH 289

Query: 300 ADTIEKNGGAVSLNGFEIILQQLQKLAPELHRVHFSSHLNGLAHDDYIAALENLHCYFDY 359
           ADTIEKNG AVSLNGFEI+L+QLQKLAPELHRVHF S+LN L+HDDY AALENLHCYFDY
Sbjct: 290 ADTIEKNGSAVSLNGFEIVLRQLQKLAPELHRVHFLSYLNALSHDDYTAALENLHCYFDY 349

Query: 360 SAGTEGIDYVPPVGSNSFGRYEIGILCLGMMHFHFGHPKLALEVLTEAVRVSQQQNNDTC 419
           SAG EG D+VPP G+NS G YEI +LCLGMMHFHFGHPKLALEVLTEAVRVSQQ +NDT 
Sbjct: 350 SAGKEGFDFVPPSGNNSSGTYEIALLCLGMMHFHFGHPKLALEVLTEAVRVSQQHSNDTN 409

Query: 420 LAYTLAAISNLLFENGISSTAGILGSSYTPFTSIGIXXXXXXXXXXXXRGSLKRAENLKL 479
           LAYTLAAISNLLFENGISSTAGILGSSY+PFTS+GI            RGSLKRAENLKL
Sbjct: 410 LAYTLAAISNLLFENGISSTAGILGSSYSPFTSMGISLSVQQQLFVLLRGSLKRAENLKL 469

Query: 480 KRLVASNHLAMAKFELTHVQRPLLSFGPKTSMKLSTCPVNVCKELRLSSHLISDFSSESS 539
           KRL+ASNHLAMAKF+LTHVQRPLLSFGPK+SMKLSTCPVNV KELRLSSHLISDFS+ESS
Sbjct: 470 KRLLASNHLAMAKFDLTHVQRPLLSFGPKSSMKLSTCPVNVSKELRLSSHLISDFSTESS 529

Query: 540 AMTIDGAFSTAWLRNLQKPTGSLVLCQENGS 570
           AMTIDGAFSTAWLRNLQKP GS + CQ++GS
Sbjct: 530 AMTIDGAFSTAWLRNLQKPNGSNIFCQDSGS 560