Miyakogusa Predicted Gene

Lj2g3v3084020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3084020.1 tr|G7K3B3|G7K3B3_MEDTR CCP OS=Medicago truncatula
GN=MTR_5g090940 PE=4 SV=1,38.73,0.00000000000004, ,gene.g44150.t1.1
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g090940.1 | disease resistance protein (TIR-NBS-LRR class)...    83   2e-16

>Medtr5g090940.1 | disease resistance protein (TIR-NBS-LRR class) | HC
            | chr5:39619088-39625198 | 20130731
          Length = 1651

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 74/142 (52%), Gaps = 26/142 (18%)

Query: 82   SADDPLLQALVMKKD---ESLGLRLKLCWKLIEEHKALHKKFDNLKMKVLEVPTWLEG-- 136
            S +DPLLQ  +M K    ES   + KL  KL+EE  AL KKF+ +  ++  +    +G  
Sbjct: 1310 SYEDPLLQTFMMMKQGSCESERAKSKLFCKLLEEQNALRKKFEEIDNEIATMDNSKKGHI 1369

Query: 137  ------------------LYDTGIEGFHNTLEFQDLMSAAYLKGVRDGVLGAQATLVALD 178
                               YD GIEGF N+ E QDLM+A Y  G+R+GVL A+A L+ALD
Sbjct: 1370 LNEKLADVLKGRAEELQRFYDAGIEGFKNSKEIQDLMTATYSNGMRNGVLEARAILLALD 1429

Query: 179  MNRVTPEEHVTVEDHNHIDEHD 200
            M+ +T   HV   + N I   D
Sbjct: 1430 MDIIT---HVFEGNENEISAQD 1448



 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 134  LEGLYDTGIEGFHNTLEFQDLMSAAYLKGVRDGVLGAQATLVALDMNRVTP-----EEHV 188
            L  LYD  IE   N+ E QDLMSA YL G++DGVL AQATL++L+M++ TP     EEH+
Sbjct: 1534 LTSLYDAEIEQLQNSEEIQDLMSAIYLSGLKDGVLEAQATLLSLNMDKPTPMFEENEEHI 1593

Query: 189  T 189
            T
Sbjct: 1594 T 1594