Miyakogusa Predicted Gene

Lj2g3v3072960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3072960.1 Non Characterized Hit- tr|I1M706|I1M706_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13657
PE,89.42,0,SUBFAMILY NOT NAMED,NULL; CT120 PROTEIN,NULL; TRAM, LAG1
and CLN8 homology domains.,TRAM/LAG1/CLN8 h,CUFF.39678.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g090550.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain...   506   e-144
Medtr3g450410.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain...   473   e-134
Medtr3g063070.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain...   238   3e-63
Medtr3g063070.2 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain...   238   3e-63
Medtr1g022950.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain...    49   4e-06

>Medtr5g090550.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain
           protein | HC | chr5:39442711-39437877 | 20130731
          Length = 274

 Score =  506 bits (1304), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/274 (92%), Positives = 265/274 (96%)

Query: 1   MLASKDIMKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKS 60
           MLASK+IMKFKSYQNQANLFVKEYLLADPLIPYTSI+GGIFACKMVYDLTQLFSTIHFKS
Sbjct: 1   MLASKEIMKFKSYQNQANLFVKEYLLADPLIPYTSIIGGIFACKMVYDLTQLFSTIHFKS 60

Query: 61  YSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITVRSSSLSTFAL 120
           YSSLT+IQRIEWNNRA+STIH+IFITTMSLY VFCSNLYSDSESAEL+T RSS+LSTFAL
Sbjct: 61  YSSLTRIQRIEWNNRAMSTIHSIFITTMSLYLVFCSNLYSDSESAELLTERSSALSTFAL 120

Query: 121 GVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTT 180
           GVSVGYF+ADL MIFWFFP+LGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTT
Sbjct: 121 GVSVGYFMADLGMIFWFFPALGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTT 180

Query: 181 PGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFG 240
           PGINLRWYLD AGMKRSKAYLINGVVIFIAWLVARILLFVYMF HAYLHFDQVQ MH FG
Sbjct: 181 PGINLRWYLDVAGMKRSKAYLINGVVIFIAWLVARILLFVYMFYHAYLHFDQVQQMHPFG 240

Query: 241 QILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           QILV+VVP+ LSVMNLIWFSKIIKG+MK LAKRQ
Sbjct: 241 QILVVVVPVVLSVMNLIWFSKIIKGLMKTLAKRQ 274


>Medtr3g450410.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain
           protein | HC | chr3:17356926-17350940 | 20130731
          Length = 274

 Score =  473 bits (1218), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/274 (81%), Positives = 249/274 (90%)

Query: 1   MLASKDIMKFKSYQNQANLFVKEYLLADPLIPYTSIVGGIFACKMVYDLTQLFSTIHFKS 60
           ML SK++M  +SYQNQANLFVK+YLLAD  IPYTS+ GGIFACK+VYDLTQL  T  FK+
Sbjct: 1   MLESKEMMSLESYQNQANLFVKDYLLADSFIPYTSVFGGIFACKLVYDLTQLIGTNSFKT 60

Query: 61  YSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITVRSSSLSTFAL 120
           YSSL+KIQRIEWNNRA+STIH+IFITTMSLY VFCSNL+SD++S + ITVRSSSLSTFAL
Sbjct: 61  YSSLSKIQRIEWNNRAMSTIHSIFITTMSLYMVFCSNLFSDNQSTDPITVRSSSLSTFAL 120

Query: 121 GVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISETTT 180
           GVSVGYF+AD  MIFW+FPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISE TT
Sbjct: 121 GVSVGYFLADFVMIFWYFPSLGGYEYVIHHLFSLVAVAYSMLSGEGQLYTYMVLISEATT 180

Query: 181 PGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFG 240
           PGINLRWYLD AGMKRSKAYLINGVVIF+AW+VARILLFVYMF H YLHFDQV+ MH  G
Sbjct: 181 PGINLRWYLDVAGMKRSKAYLINGVVIFLAWMVARILLFVYMFYHVYLHFDQVEKMHIIG 240

Query: 241 QILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           QIL+IVVP+ LSVMNL+WF+KI++G+ K LAKRQ
Sbjct: 241 QILIIVVPMVLSVMNLVWFAKIVRGLRKTLAKRQ 274


>Medtr3g063070.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain
           protein | HC | chr3:28547655-28542831 | 20130731
          Length = 264

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/240 (48%), Positives = 156/240 (65%)

Query: 35  SIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVF 94
           S+  GI    +VY LT  FS+  F  Y  L+   ++EWNNR  ST HA F +  SLY + 
Sbjct: 22  SVFSGIIFSLIVYQLTAAFSSRLFIGYRKLSSAGKVEWNNRGFSTFHAFFASFTSLYLLI 81

Query: 95  CSNLYSDSESAELITVRSSSLSTFALGVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSL 154
            S+L+ D    +L+  R+S+ S   L  S GYF+ DLA I W FP+LGG EYV+HH  SL
Sbjct: 82  LSDLFKDDSQEKLVVNRTSTFSNSVLSFSTGYFLTDLAFIIWNFPALGGLEYVLHHGLSL 141

Query: 155 VAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVA 214
            ++  S+LSG+  +Y  MVL +E TTP +NLRWYLD AG+K SK Y+ NGV +F  WLVA
Sbjct: 142 FSIIQSLLSGQAHIYILMVLFTEGTTPFVNLRWYLDTAGLKSSKLYIWNGVALFFGWLVA 201

Query: 215 RILLFVYMFCHAYLHFDQVQHMHTFGQILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           RI LF+++F H + HFD+V+ +   G   ++VVP  LS+MNL WF KI KGM+K L+K +
Sbjct: 202 RIFLFMFLFTHMWTHFDEVKQVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAK 261


>Medtr3g063070.2 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain
           protein | HC | chr3:28547875-28542849 | 20130731
          Length = 264

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/240 (48%), Positives = 156/240 (65%)

Query: 35  SIVGGIFACKMVYDLTQLFSTIHFKSYSSLTKIQRIEWNNRAISTIHAIFITTMSLYFVF 94
           S+  GI    +VY LT  FS+  F  Y  L+   ++EWNNR  ST HA F +  SLY + 
Sbjct: 22  SVFSGIIFSLIVYQLTAAFSSRLFIGYRKLSSAGKVEWNNRGFSTFHAFFASFTSLYLLI 81

Query: 95  CSNLYSDSESAELITVRSSSLSTFALGVSVGYFIADLAMIFWFFPSLGGYEYVIHHLFSL 154
            S+L+ D    +L+  R+S+ S   L  S GYF+ DLA I W FP+LGG EYV+HH  SL
Sbjct: 82  LSDLFKDDSQEKLVVNRTSTFSNSVLSFSTGYFLTDLAFIIWNFPALGGLEYVLHHGLSL 141

Query: 155 VAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDAAGMKRSKAYLINGVVIFIAWLVA 214
            ++  S+LSG+  +Y  MVL +E TTP +NLRWYLD AG+K SK Y+ NGV +F  WLVA
Sbjct: 142 FSIIQSLLSGQAHIYILMVLFTEGTTPFVNLRWYLDTAGLKSSKLYIWNGVALFFGWLVA 201

Query: 215 RILLFVYMFCHAYLHFDQVQHMHTFGQILVIVVPLALSVMNLIWFSKIIKGMMKMLAKRQ 274
           RI LF+++F H + HFD+V+ +   G   ++VVP  LS+MNL WF KI KGM+K L+K +
Sbjct: 202 RIFLFMFLFTHMWTHFDEVKQVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAK 261


>Medtr1g022950.1 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain
           protein | HC | chr1:7253562-7256936 | 20130731
          Length = 240

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 19/205 (9%)

Query: 71  EWNNRAISTIHAIFITTMSLYFVFCSNLYSDSESAELITVRSSSLSTFA-LGVSVGYFIA 129
           +++NR +STIHAI   T++   V       D +         SS      L VS+ Y I 
Sbjct: 33  DFSNRIVSTIHAILAVTLATLSV------QDWKCPICPVASDSSYKQMEVLAVSLSYLIY 86

Query: 130 DLAMIFWFFPSLGGYEYVIHHLFSLVAVAYSMLSGE-GQLYTYMVLISETTTPGINLRWY 188
           DL  +   F     ++  IHHL S+V +   +   + G      V ++E ++P ++LR  
Sbjct: 87  DL--VCCLFDEKFNWDNTIHHLVSIVGLIAGLCYQKCGSEMVGAVWVTEMSSPFLHLREL 144

Query: 189 LDAAGMKRSKAYLINGVVIFIAWLVARILLFVYMFCHAYLHFDQVQHMHTFGQILVIVVP 248
           L   G K +   L   +      L A I  F  M     + +  +   + F   L+  + 
Sbjct: 145 LKELGYKDTPLNLTADI------LFASIFTFARMMIGPCITYVTLTSNNPF---LIKAMG 195

Query: 249 LALSVMNLIWFSKIIKGMMKMLAKR 273
           L L +++  WF KI++ M   L K+
Sbjct: 196 LGLQLVSTFWFYKIVRMMKYKLTKK 220