Miyakogusa Predicted Gene

Lj2g3v3071910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3071910.1 tr|C0Z2T4|C0Z2T4_ARATH AT1G06680 protein
OS=Arabidopsis thaliana GN=AT1G06680 PE=4
SV=1,83.33,0.000000000000002,seg,NULL;
Mog1p/PsbP-like,Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich; no
description,Mog1/PsbP, al,CUFF.39676.1
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g090410.1 | oxygen-evolving enhancer protein 2-1 | HC | ch...   417   e-117
Medtr3g449930.1 | oxygen-evolving enhancer protein 2-1 | HC | ch...   401   e-112
Medtr3g449930.2 | oxygen-evolving enhancer protein 2-1 | HC | ch...   361   e-100

>Medtr5g090410.1 | oxygen-evolving enhancer protein 2-1 | HC |
           chr5:39366943-39371254 | 20130731
          Length = 269

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/267 (78%), Positives = 228/267 (85%), Gaps = 8/267 (2%)

Query: 2   ASTQCFLYHHAL----TSRASSIQRLVVNTKPNQ---VFCKAQKQATQEED-DASIVSRR 53
           +STQCFL H AL    TS   S QR VVN +      + CKA+KQA QE+D +  IVSRR
Sbjct: 3   SSTQCFLSHLALSTPTTSTRFSSQRQVVNVRSKAKQFLVCKAKKQAIQEDDGNNIIVSRR 62

Query: 54  LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSVPSKWNPSKE 113
           LALTVLIG A VGSKVSPADAAYG+SANVFGKPKTNTDFLPY+GDGFKLSVPSKWNPSKE
Sbjct: 63  LALTVLIGGAVVGSKVSPADAAYGQSANVFGKPKTNTDFLPYDGDGFKLSVPSKWNPSKE 122

Query: 114 VEYTGQVLRYEDNFDXXXXXXXXXXXXDKKSITDYGSPEEFLSKVDYLLGKQAFFGETQA 173
           VEYTGQVLRYEDNFD            DKK+ITDYGSPEEFLS+V+YLLGKQAFFGET +
Sbjct: 123 VEYTGQVLRYEDNFDTTSNVVVTVTPTDKKAITDYGSPEEFLSQVNYLLGKQAFFGETLS 182

Query: 174 EGGFDPNAVATANILESSTPVVDGKQYYVLTVLTRTADGDEGGKHQLIRAAVKDGKLYIC 233
           EGGFDPNAVATANILE+STPV+DGK+YYVL+VLTRTADGDEGGKHQ+IRA VKDGKLYIC
Sbjct: 183 EGGFDPNAVATANILETSTPVIDGKKYYVLSVLTRTADGDEGGKHQIIRATVKDGKLYIC 242

Query: 234 KAQAGDKRWFKGARRYVESTASSFSVA 260
           KAQAGDKRWFKGARR+VESTA+SFSVA
Sbjct: 243 KAQAGDKRWFKGARRFVESTANSFSVA 269


>Medtr3g449930.1 | oxygen-evolving enhancer protein 2-1 | HC |
           chr3:17103225-17105971 | 20130731
          Length = 261

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/262 (75%), Positives = 220/262 (83%), Gaps = 3/262 (1%)

Query: 1   MASTQCFLY-HHALTSRASSI-QRLVVNTKPNQVFCKAQKQATQEEDDASIVSRRLALTV 58
           MASTQCFL+  +ALT+ + S+ QR +V  KPN + CKAQKQ   E+   S+VSRRLAL+V
Sbjct: 1   MASTQCFLHPQYALTTPSRSLSQRQIVTNKPNHIVCKAQKQDV-EDVAVSVVSRRLALSV 59

Query: 59  LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSVPSKWNPSKEVEYTG 118
           L+GAAAVGSKVSPADAAYGE+ANVFGK KTNTDFLPYNGDGFKL VP+KWNPSKE E+ G
Sbjct: 60  LLGAAAVGSKVSPADAAYGEAANVFGKAKTNTDFLPYNGDGFKLLVPAKWNPSKEREFPG 119

Query: 119 QVLRYEDNFDXXXXXXXXXXXXDKKSITDYGSPEEFLSKVDYLLGKQAFFGETQAEGGFD 178
           QVLRYEDNFD            DKKSITDYGSPEEFLSKVDYLLGKQAFFG+T +EGGFD
Sbjct: 120 QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 179

Query: 179 PNAVATANILESSTPVVDGKQYYVLTVLTRTADGDEGGKHQLIRAAVKDGKLYICKAQAG 238
            NAVA ANILESS PV+ GKQY+ ++VLTRTADGDEGGKHQLI A V DGKLYICKAQAG
Sbjct: 180 TNAVAVANILESSAPVIGGKQYFNISVLTRTADGDEGGKHQLITATVNDGKLYICKAQAG 239

Query: 239 DKRWFKGARRYVESTASSFSVA 260
           DKRWFKGAR++VE TASSFSVA
Sbjct: 240 DKRWFKGARKFVEDTASSFSVA 261


>Medtr3g449930.2 | oxygen-evolving enhancer protein 2-1 | HC |
           chr3:17103282-17105971 | 20130731
          Length = 244

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/262 (70%), Positives = 204/262 (77%), Gaps = 20/262 (7%)

Query: 1   MASTQCFLY-HHALTSRASSI-QRLVVNTKPNQVFCKAQKQATQEEDDASIVSRRLALTV 58
           MASTQCFL+  +ALT+ + S+ QR +V  KPN + CKAQKQ   E+   S+VSRRLAL+V
Sbjct: 1   MASTQCFLHPQYALTTPSRSLSQRQIVTNKPNHIVCKAQKQDV-EDVAVSVVSRRLALSV 59

Query: 59  LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSVPSKWNPSKEVEYTG 118
           L+GAAAVGSKVSPADAAYGE+ANVFGK KTNTDFLPYNGDGFKL VP+KWNPSKE E+ G
Sbjct: 60  LLGAAAVGSKVSPADAAYGEAANVFGKAKTNTDFLPYNGDGFKLLVPAKWNPSKEREFPG 119

Query: 119 QVLRYEDNFDXXXXXXXXXXXXDKKSITDYGSPEEFLSKVDYLLGKQAFFGETQAEGGFD 178
           QVLRYEDNFD            DKKSITDYGSPEEFLSK                 GGFD
Sbjct: 120 QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSK-----------------GGFD 162

Query: 179 PNAVATANILESSTPVVDGKQYYVLTVLTRTADGDEGGKHQLIRAAVKDGKLYICKAQAG 238
            NAVA ANILESS PV+ GKQY+ ++VLTRTADGDEGGKHQLI A V DGKLYICKAQAG
Sbjct: 163 TNAVAVANILESSAPVIGGKQYFNISVLTRTADGDEGGKHQLITATVNDGKLYICKAQAG 222

Query: 239 DKRWFKGARRYVESTASSFSVA 260
           DKRWFKGAR++VE TASSFSVA
Sbjct: 223 DKRWFKGARKFVEDTASSFSVA 244