Miyakogusa Predicted Gene
- Lj2g3v3059750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3059750.1 Non Characterized Hit- tr|I1M731|I1M731_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28135
PE,79.93,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; no descripti,CUFF.39699.1
(580 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 763 0.0
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 666 0.0
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 666 0.0
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 297 2e-80
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 290 3e-78
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 268 1e-71
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 268 1e-71
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 263 3e-70
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 257 2e-68
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 256 5e-68
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 256 5e-68
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 249 5e-66
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 249 5e-66
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 249 8e-66
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 248 2e-65
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 247 2e-65
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 246 4e-65
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 3e-64
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 3e-64
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 3e-64
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 240 3e-63
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 240 3e-63
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 236 5e-62
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 236 5e-62
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 231 2e-60
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 231 2e-60
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 230 3e-60
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 229 7e-60
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 223 3e-58
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 220 3e-57
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 219 6e-57
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 218 2e-56
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 218 2e-56
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 218 2e-56
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 217 2e-56
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 216 6e-56
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 214 2e-55
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 214 2e-55
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 214 3e-55
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 213 3e-55
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 211 1e-54
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 211 1e-54
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 211 1e-54
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 211 1e-54
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 208 1e-53
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 206 7e-53
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 205 9e-53
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 195 1e-49
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 189 8e-48
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 182 7e-46
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 179 9e-45
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 177 2e-44
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 177 2e-44
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 176 4e-44
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 176 5e-44
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 174 2e-43
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 174 2e-43
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 174 2e-43
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 172 1e-42
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 171 2e-42
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 169 9e-42
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 168 1e-41
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 154 2e-37
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 154 2e-37
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 154 3e-37
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 152 6e-37
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 151 2e-36
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 149 1e-35
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 147 3e-35
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 145 1e-34
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 142 6e-34
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 142 6e-34
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 142 1e-33
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 142 1e-33
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 139 6e-33
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 136 7e-32
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 136 7e-32
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 135 8e-32
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 135 8e-32
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 135 8e-32
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 134 4e-31
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 130 4e-30
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 126 7e-29
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 124 4e-28
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 114 4e-25
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 108 2e-23
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 105 9e-23
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 103 3e-22
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 100 3e-21
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 100 3e-21
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 100 3e-21
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 99 8e-21
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 97 7e-20
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 95 2e-19
Medtr1g015150.1 | DEAD-box ATP-dependent RNA helicase, putative ... 94 5e-19
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 90 6e-18
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 87 5e-17
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 87 6e-17
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 80 6e-15
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 4e-13
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 5e-11
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 66 1e-10
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 66 1e-10
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 66 1e-10
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 65 2e-10
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 65 2e-10
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 63 7e-10
Medtr1g102425.1 | GUCT (NUC152) domain protein | HC | chr1:46259... 63 9e-10
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 62 1e-09
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 62 1e-09
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 62 2e-09
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 60 6e-09
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 60 8e-09
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 60 8e-09
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 58 3e-08
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 56 8e-08
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 56 1e-07
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 54 6e-07
Medtr1g031140.1 | ATP-dependent DNA helicase RecG | HC | chr1:10... 53 7e-07
Medtr1g103260.1 | fanconi anemia, complementation group M protei... 52 1e-06
Medtr4g116860.1 | endoribonuclease dicer-like protein | HC | chr... 51 3e-06
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/464 (81%), Positives = 409/464 (88%), Gaps = 9/464 (1%)
Query: 1 MITAILRRACSALSRR---GAATFIAASTVTGELRQLPVVARARHFHSNPVPLQFRASLP 57
MIT ILRRA S +SRR AA + ++T ELR L AR FHS PL FRAS
Sbjct: 1 MITTILRRASSTISRRTIPAAAEILFSTTAATELRHLT----ARSFHSKSQPLLFRASSA 56
Query: 58 SLAEFAVADFPYEEGSKN--DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQ 115
S A +A FP+EE SK+ DEGLEI KLGIS++IVSAL KKGI+KLFPIQRAVLEPAMQ
Sbjct: 57 SRAGYAAEAFPFEEPSKSNSDEGLEIAKLGISQDIVSALEKKGITKLFPIQRAVLEPAMQ 116
Query: 116 GRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYD 175
GRDMIGRARTGTGKTLAFGIPI DKII+FNAKHGRG+DPLAL LAPTRELAKQVEKEFY+
Sbjct: 117 GRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLALVLAPTRELAKQVEKEFYE 176
Query: 176 SAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEAD 235
+APNLDTICVYGGTPISQQMRQLDYGVD+ VGTPGRIIDLLNRGALNLKEVQF++LDEAD
Sbjct: 177 AAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEAD 236
Query: 236 QMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLA 295
QMLQ+GFQEDVEKIL+RLP +RQTLMFSATMP IKQLTR YL NP+TIDLVGDSDQKLA
Sbjct: 237 QMLQVGFQEDVEKILERLPAERQTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLA 296
Query: 296 DGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHG 355
DGISLYSI++D+YVK GI+ PLI EHAKGGKCIVFTQTKRDADR+SH MSKS+ CEALHG
Sbjct: 297 DGISLYSILSDAYVKAGIIVPLIKEHAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHG 356
Query: 356 DISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTG 415
DISQ QRERTLAGFR GHFNVLVATDVASRGLDIPNVDLVIHY+LPNNSEIFVHRSGRTG
Sbjct: 357 DISQIQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTG 416
Query: 416 RAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVDRASV 459
RAGKKGTAILV+T+DQSR +RTIERDVG KF ELPKIAVD AS+
Sbjct: 417 RAGKKGTAILVYTQDQSRTLRTIERDVGCKFSELPKIAVDTASL 460
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/425 (76%), Positives = 362/425 (85%), Gaps = 5/425 (1%)
Query: 41 RHFHSNPVPLQFRASLPSLAEFAVADFPYEE-----GSKNDEGLEIKKLGISEEIVSALA 95
R FH+ PL F +SL S D+ + E G DEGLEI KLGIS+EIV+AL
Sbjct: 46 RLFHAKSGPLNFHSSLVSRGAQLAVDYDHAEHDDGCGVNGDEGLEIAKLGISKEIVNALG 105
Query: 96 KKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPL 155
KKGI+KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI DKIIKFNAK+G+ RDPL
Sbjct: 106 KKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPL 165
Query: 156 ALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDL 215
AL LAPTRELA+QVEKEF D+APNL+ I +YGG PI QQ+ +L GVD+VVGTPGR+IDL
Sbjct: 166 ALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDL 225
Query: 216 LNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTR 275
L RG+L LK+V ++VLDEADQMLQ+GFQE VE IL +LP KRQTLMFSATMP IK LTR
Sbjct: 226 LKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTR 285
Query: 276 KYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKR 335
YLN P+TIDLVGDSDQKLADGISLYSI +++Y K GIL PLITEHAKGGKCIVFTQTKR
Sbjct: 286 NYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHAKGGKCIVFTQTKR 345
Query: 336 DADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLV 395
DADRLSH M+KS+KCEALHGDISQ QRERTL GFR +FNVLVATDVASRGLDIPNVDLV
Sbjct: 346 DADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLV 405
Query: 396 IHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVD 455
IHY+LPNNSEIFVHRSGRTGRAGKKGTAILVHTE+QSR ++TIERDVG KFKELPKIAV+
Sbjct: 406 IHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFKELPKIAVE 465
Query: 456 RASVE 460
S +
Sbjct: 466 SGSAD 470
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/425 (76%), Positives = 362/425 (85%), Gaps = 5/425 (1%)
Query: 41 RHFHSNPVPLQFRASLPSLAEFAVADFPYEE-----GSKNDEGLEIKKLGISEEIVSALA 95
R FH+ PL F +SL S D+ + E G DEGLEI KLGIS+EIV+AL
Sbjct: 46 RLFHAKSGPLNFHSSLVSRGAQLAVDYDHAEHDDGCGVNGDEGLEIAKLGISKEIVNALG 105
Query: 96 KKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPL 155
KKGI+KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI DKIIKFNAK+G+ RDPL
Sbjct: 106 KKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPL 165
Query: 156 ALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDL 215
AL LAPTRELA+QVEKEF D+APNL+ I +YGG PI QQ+ +L GVD+VVGTPGR+IDL
Sbjct: 166 ALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDL 225
Query: 216 LNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTR 275
L RG+L LK+V ++VLDEADQMLQ+GFQE VE IL +LP KRQTLMFSATMP IK LTR
Sbjct: 226 LKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTR 285
Query: 276 KYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKR 335
YLN P+TIDLVGDSDQKLADGISLYSI +++Y K GIL PLITEHAKGGKCIVFTQTKR
Sbjct: 286 NYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHAKGGKCIVFTQTKR 345
Query: 336 DADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLV 395
DADRLSH M+KS+KCEALHGDISQ QRERTL GFR +FNVLVATDVASRGLDIPNVDLV
Sbjct: 346 DADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLV 405
Query: 396 IHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVD 455
IHY+LPNNSEIFVHRSGRTGRAGKKGTAILVHTE+QSR ++TIERDVG KFKELPKIAV+
Sbjct: 406 IHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFKELPKIAVE 465
Query: 456 RASVE 460
S +
Sbjct: 466 SGSAD 470
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 242/394 (61%), Gaps = 29/394 (7%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
I K ISE + L +KGI LFPIQ + +QG D++GRARTG GKTLAF +PI +
Sbjct: 45 ISKFKISEPLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILES 104
Query: 141 IIKFNAK---------HGRGRD-----------PLALALAPTRELAKQVEKEF--YDSAP 178
+ AK +G R+ P L L PTRELA QV +F Y A
Sbjct: 105 VTNGKAKETNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAM 164
Query: 179 NLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQML 238
L + C+YGG P Q +L+ GVD+V+GTPGRI D + RG+++L +++F VLDEAD+ML
Sbjct: 165 GLTSCCLYGGAPYKAQEIKLERGVDIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEADEML 224
Query: 239 QIGFQEDVEKILDRLP--PKRQTLMFSATMPYEIKQLTRKYLN-NPVTIDLVGDSDQKLA 295
++GF EDVE IL ++ + QTL+FSAT+P +K + +++L + T DLVG++ K +
Sbjct: 225 RMGFVEDVELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMKAS 284
Query: 296 DGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHG 355
+ Y + + ++ +I ++ G+ I+FT+TK A +L+ + + ALHG
Sbjct: 285 TSVRHYILPCTGAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLPGA---RALHG 341
Query: 356 DISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTG 415
DI QAQRE TL+GFR G F LVAT+VA+RGLDI +V L+I + P + E ++HRSGRTG
Sbjct: 342 DIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 401
Query: 416 RAGKKGTAILVHTEDQSRAIRTIERDVGSKFKEL 449
RAG G A++++ +S I IER+ G KF+ +
Sbjct: 402 RAGNTGVAVMLYDPRRSN-IPKIERESGVKFEHI 434
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 233/385 (60%), Gaps = 13/385 (3%)
Query: 74 KNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAF 133
K D+ + ISE + L + I LFPIQ + G D++GRARTG GKTLAF
Sbjct: 97 KKDDPNAVSNFRISEPLRMKLKENKIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAF 156
Query: 134 GIPIKDKIIKFNAKH----GRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYG 187
+PI + + AK G GR P + L PTRELA QV +F Y S+ L VYG
Sbjct: 157 VLPILESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAVYG 216
Query: 188 GTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVE 247
G P Q +L GVD+V+GTPGRI D + RG ++L ++F VLDEAD+ML++GF +DVE
Sbjct: 217 GAPYGAQETKLRRGVDIVIGTPGRIKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDDVE 276
Query: 248 KILDRLP--PKRQTLMFSATMPYEIKQLTRKYL-NNPVTIDLVGDSDQKLADGISLYSIV 304
IL ++ K QTL+FSAT+P +KQ++ K+L ++ T DLVG+ K + + +
Sbjct: 277 LILGKVQDVTKVQTLLFSATLPSWVKQISTKFLKSDKKTADLVGNEKMKASTNVRHIILP 336
Query: 305 TDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRER 364
S + ++ +I ++ GG+ I+F + K A L+ + + ALHGDI Q+QRE
Sbjct: 337 CSSTARAQLIPDIIRCYSSGGRTIIFAEKKESASELAGLLPGA---RALHGDIQQSQREI 393
Query: 365 TLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
TL GFR G F LVAT+VA+RGLDI +V L+I + P + E ++HRSGRTGRAG G A+
Sbjct: 394 TLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 453
Query: 425 LVHTEDQSRAIRTIERDVGSKFKEL 449
+++ +S I IER+ G KF+ +
Sbjct: 454 MLYDPRRSN-IAKIEREAGIKFEHV 477
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 217/356 (60%), Gaps = 10/356 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ G EI+ + G S PIQ A+QGRD++ A+TG+GKTL + +P
Sbjct: 495 MTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAF 554
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA--PNLDTICVYGGTPISQQ 194
I + + N+ +G P L LAPTRELA Q+++E + A + C+YGG P + Q
Sbjct: 555 ILLRQRRNNSLNG----PTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQ 610
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+++LD G D+VV TPGR+ D+L ++ +V +VLDEAD+ML +GF+ + KI++ +P
Sbjct: 611 LKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIP 670
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
P+RQTLM++AT P E++++ L NPV ++ +G+ D+ A+ I+ Y V KQ
Sbjct: 671 PRRQTLMYTATWPKEVRKIAGDLLVNPVQVN-IGNVDELAANKSITQYVEVVPQMEKQRR 729
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ +G K I+F TK+ D+L+ S+ ++ A+HGD SQ +R+ L FR G
Sbjct: 730 LEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGK 789
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
+LVATDVA+RGLDI ++ +VI+YD PN E +VHR GRTGRAG G A +E
Sbjct: 790 SPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSE 845
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 217/356 (60%), Gaps = 10/356 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-- 136
+ G EI+ + G S PIQ A+QGRD++ A+TG+GKTL + +P
Sbjct: 495 MTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAF 554
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSA--PNLDTICVYGGTPISQQ 194
I + + N+ +G P L LAPTRELA Q+++E + A + C+YGG P + Q
Sbjct: 555 ILLRQRRNNSLNG----PTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQ 610
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+++LD G D+VV TPGR+ D+L ++ +V +VLDEAD+ML +GF+ + KI++ +P
Sbjct: 611 LKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIP 670
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD-GISLYSIVTDSYVKQGI 313
P+RQTLM++AT P E++++ L NPV ++ +G+ D+ A+ I+ Y V KQ
Sbjct: 671 PRRQTLMYTATWPKEVRKIAGDLLVNPVQVN-IGNVDELAANKSITQYVEVVPQMEKQRR 729
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGH 373
L ++ +G K I+F TK+ D+L+ S+ ++ A+HGD SQ +R+ L FR G
Sbjct: 730 LEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGK 789
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
+LVATDVA+RGLDI ++ +VI+YD PN E +VHR GRTGRAG G A +E
Sbjct: 790 SPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSE 845
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 211/349 (60%), Gaps = 9/349 (2%)
Query: 90 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH- 148
++ + K G + PIQ A++GRD+IG A TG+GKTLA+ +P I+ NA+
Sbjct: 106 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIVHVNAQPI 162
Query: 149 -GRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVV 205
G P+ L LAPTRELA Q+++E + ++ + + C+YGG P Q+R L GV+++
Sbjct: 163 LDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEII 222
Query: 206 VGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSAT 265
+ TPGR+ID+L NL+ V ++VLDEAD+ML +GF + KI+ ++ P RQTL +SAT
Sbjct: 223 IATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSAT 282
Query: 266 MPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGG 325
P E++QL R++L NP + ++G D K I Y + K L L+ + G
Sbjct: 283 WPKEVEQLARQFLYNPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGS 341
Query: 326 KCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVAS 384
+ ++F TK+ D+++ + ++HGD SQA+R+ L+ F+ G ++ ATDVA+
Sbjct: 342 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAA 401
Query: 385 RGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
RGLD+ +V VI+YD P + E +VHR GRTGRAG KGTA T +R
Sbjct: 402 RGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANAR 450
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 216/353 (61%), Gaps = 9/353 (2%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG- 149
+ +AK G + PIQ A+ GRD+IG A TG+GKTL++ +P I+ +A+
Sbjct: 213 LDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLP---AIVHVSAQPRL 269
Query: 150 -RGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
+G P+ L LAPTRELA Q+++E + S N+ C+YGG P Q+R L GV++V+
Sbjct: 270 VQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR+ID+L NL+ V ++VLDEAD+ML +GF+ + KI++++ P RQTL +SAT
Sbjct: 330 ATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATW 389
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P E++ L R++L+NP + ++G K I+ V K L L+ E G +
Sbjct: 390 PKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSR 448
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
++FT+TK+ D+++ + ++HGD +QA+R+ LA F+ G ++ ATDVA+R
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 386 GLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
GLD+ ++ V++YD P++ E +VHR GRTGRAG KGTA T ++ R +
Sbjct: 509 GLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDL 561
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 209/344 (60%), Gaps = 10/344 (2%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP--IKDKII 142
G EI+ + G S PIQ A+Q +D++ A+TG+GKTL + +P I K
Sbjct: 170 GFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRT 229
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
NAK G P L L+PTRELA Q++ E + + C+YGG P Q++ +D
Sbjct: 230 NNNAKMG----PTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDR 285
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
G D+VV TPGR+ D+L ++L +V ++VLDEAD+ML +GF+ + KI++ +P +RQTL
Sbjct: 286 GADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTL 345
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV-KQGILAPLIT 319
MF+AT P E++++ L NPV ++ +G+ D+ +A+ I +YV KQ L ++
Sbjct: 346 MFTATWPKEVRRIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLTYVEKQRRLETILR 404
Query: 320 EHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVA 379
+G K I+F TK+ D+L+ ++++ A+HGD SQA R+ L FR G VLVA
Sbjct: 405 SQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVA 464
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
TDVA+RGLD+ ++ +V+++D P E +VHR GRTGRAG G A
Sbjct: 465 TDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIA 508
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 209/344 (60%), Gaps = 10/344 (2%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP--IKDKII 142
G EI+ + G S PIQ A+Q +D++ A+TG+GKTL + +P I K
Sbjct: 170 GFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRT 229
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
NAK G P L L+PTRELA Q++ E + + C+YGG P Q++ +D
Sbjct: 230 NNNAKMG----PTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDR 285
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
G D+VV TPGR+ D+L ++L +V ++VLDEAD+ML +GF+ + KI++ +P +RQTL
Sbjct: 286 GADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTL 345
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV-KQGILAPLIT 319
MF+AT P E++++ L NPV ++ +G+ D+ +A+ I +YV KQ L ++
Sbjct: 346 MFTATWPKEVRRIAADLLVNPVQVN-IGNVDELVANKSITQHIEVLTYVEKQRRLETILR 404
Query: 320 EHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVA 379
+G K I+F TK+ D+L+ ++++ A+HGD SQA R+ L FR G VLVA
Sbjct: 405 SQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVA 464
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
TDVA+RGLD+ ++ +V+++D P E +VHR GRTGRAG G A
Sbjct: 465 TDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIA 508
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 249 bits (637), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 225/373 (60%), Gaps = 30/373 (8%)
Query: 101 KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRD-----PL 155
K P+QR + ++ GRD++ A+TG+GKT AF PI I+ R PL
Sbjct: 166 KPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPL 225
Query: 156 ALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRII 213
AL L+PTREL+ Q+ +E + + + YGG PI+QQ+R+L+ GVD++V TPGR++
Sbjct: 226 ALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
Query: 214 DLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYE 269
DLL R ++L ++++ LDEAD+ML +GF+ + KI++++ PP RQT++FSAT P E
Sbjct: 286 DLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKE 345
Query: 270 IKQLTRKYLNNPV--TIDLVGDS----DQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
I++L +L+N + + VG S DQ++ V +S + ++ L + A
Sbjct: 346 IQRLASDFLSNYIFLAVGRVGSSTDLIDQRV-------EYVQESDKRSHLMDLLHAQRAN 398
Query: 324 G--GK---CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
G GK +VF +TK+ AD L H + + +HGD SQ +RE L F+ G+ +L
Sbjct: 399 GVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPIL 458
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRT 437
VATDVA+RGLDIP+V V+++DLPN+ + +VHR GRTGRAGKKG A E+ + R+
Sbjct: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARS 518
Query: 438 IERDVGSKFKELP 450
++ + +E+P
Sbjct: 519 LQDLMQEANQEVP 531
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 249 bits (637), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 225/373 (60%), Gaps = 30/373 (8%)
Query: 101 KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRD-----PL 155
K P+QR + ++ GRD++ A+TG+GKT AF PI I+ R PL
Sbjct: 166 KPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPL 225
Query: 156 ALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRII 213
AL L+PTREL+ Q+ +E + + + YGG PI+QQ+R+L+ GVD++V TPGR++
Sbjct: 226 ALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
Query: 214 DLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL--PPK--RQTLMFSATMPYE 269
DLL R ++L ++++ LDEAD+ML +GF+ + KI++++ PP RQT++FSAT P E
Sbjct: 286 DLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKE 345
Query: 270 IKQLTRKYLNNPV--TIDLVGDS----DQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
I++L +L+N + + VG S DQ++ V +S + ++ L + A
Sbjct: 346 IQRLASDFLSNYIFLAVGRVGSSTDLIDQRV-------EYVQESDKRSHLMDLLHAQRAN 398
Query: 324 G--GK---CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
G GK +VF +TK+ AD L H + + +HGD SQ +RE L F+ G+ +L
Sbjct: 399 GVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPIL 458
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRT 437
VATDVA+RGLDIP+V V+++DLPN+ + +VHR GRTGRAGKKG A E+ + R+
Sbjct: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARS 518
Query: 438 IERDVGSKFKELP 450
++ + +E+P
Sbjct: 519 LQDLMQEANQEVP 531
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 249 bits (635), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 209/347 (60%), Gaps = 11/347 (3%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKF 144
G+ E ++ KG K PIQ + GRD+IG A TG+GKTLAFGIP ++
Sbjct: 109 GLPENVLECC--KGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNK 166
Query: 145 NAKHG--RGRDPLALALAPTRELAKQVEKEFYDSAPN--LDTICVYGGTPISQQMRQLDY 200
G +GR+PL L L+PTRELA+Q+ D+ + ++++C+YGGTP Q+ L
Sbjct: 167 RKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQISALKS 226
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
G+D+V+GTPGRI DL+ G L+EV F+VLDEAD+ML +GF++ V IL + RQ +
Sbjct: 227 GIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQTCSARQMV 286
Query: 261 MFSATMPYEIKQLTRKYLN-NPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLIT 319
MFSAT P + L +++++ NPV + +VG D + V D ++ L L+
Sbjct: 287 MFSATWPLAVHHLAQEFMDPNPVKV-VVGSEDLSANHDVMQIVEVLDERLRDKRLLALLE 345
Query: 320 EHAKGGK--CIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNV 376
++ K K +VF K + R+ + + K ++ GD SQ +R + L+ F+ G +
Sbjct: 346 KYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPL 405
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
++ATDVA+RGLDIP+V++VI++ P E +VHR GRTGRAGKKG A
Sbjct: 406 MIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVA 452
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 208/351 (59%), Gaps = 13/351 (3%)
Query: 90 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG 149
I+ +A ++ IQ + A+ GRD++G A TG+GKT AF IP+ +
Sbjct: 127 IMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLA-QPPIR 185
Query: 150 RGRDPLALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
RG PLAL LAPTRELA+Q+EKE F S + T V GGT I +Q +L GV++ V
Sbjct: 186 RGDGPLALVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAV 245
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR ID L +G +L + ++VLDEAD+ML +GF+ + +I+ LP K QTL+FSATM
Sbjct: 246 ATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATM 305
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P EI+ L+++YL +PV + + S +L + + + + +L L+ E ++ K
Sbjct: 306 PVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENEKIDR-LLDLLVEEASQAEK 364
Query: 327 C-------IVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLV 378
C IVF + K D ++ ++ ++ L +LHG SQ++RE L FR ++LV
Sbjct: 365 CGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILV 424
Query: 379 ATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
ATDVASRGLD+ V VI+ DLP +E ++HR GRTGRAG G A +T+
Sbjct: 425 ATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTD 475
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 202/336 (60%), Gaps = 13/336 (3%)
Query: 105 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRE 164
IQ + A+ GRD++G A TG+GKT AF IP+ + RG PLAL LAPTRE
Sbjct: 111 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLA-QPPIRRGDGPLALVLAPTRE 169
Query: 165 LAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGAL 221
LA+Q+EKE F S + T V GGT I +Q +L GV++ V TPGR ID L +G
Sbjct: 170 LAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNT 229
Query: 222 NLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNP 281
+L + ++VLDEAD+ML +GF+ + +I+ LP K QTL+FSATMP EI+ L+++YL +P
Sbjct: 230 SLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASP 289
Query: 282 VTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKC-------IVFTQTK 334
V + + S +L + + + + +L L+ E ++ KC IVF + K
Sbjct: 290 VQVKVGKVSSPTTNVSQTLVKVSENEKIDR-LLDLLVEEASQAEKCGHPFPLTIVFVERK 348
Query: 335 RDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVD 393
D ++ ++ ++ L +LHG SQ++RE L FR ++LVATDVASRGLD+ V
Sbjct: 349 TRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVS 408
Query: 394 LVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTE 429
VI+ DLP +E ++HR GRTGRAG G A +T+
Sbjct: 409 HVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTD 444
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 205/362 (56%), Gaps = 29/362 (8%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+S+E++ A+ K G PIQ A + +Q RD+IG A TG+GKT AF +P+ I +
Sbjct: 293 LSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 352
Query: 146 --AKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYG 201
++ P A+ +APTRELA+Q+E E A + + + GG I +Q ++ G
Sbjct: 353 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 412
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK----- 256
++V+ TPGR+ID L R L + ++VLDEAD+M+ +GF+ V +LD +P
Sbjct: 413 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 472
Query: 257 ------------RQTLMFSATMPYEIKQLTRKYLNNPV--TIDLVGDSDQKLADGISLYS 302
R T MFSATMP +++L RKYL NPV TI G K D IS +
Sbjct: 473 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG----KATDLISQHV 528
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQ 361
I+ K L L+ E IVF TK+ AD L+ ++ K + LHG SQ Q
Sbjct: 529 IMMKESEKNYKLQRLLDE-LNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQ 587
Query: 362 RERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKG 421
RE +L GFR +NVLVATDVA RG+DIP+V VI+YD+P N E++ HR GRTGRAGK G
Sbjct: 588 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 647
Query: 422 TA 423
A
Sbjct: 648 VA 649
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 205/361 (56%), Gaps = 29/361 (8%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+S+EI+ A+ K G PIQ A + +Q RD+IG A TG+GKT AF +P+ I +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 146 --AKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYG 201
++ P A+ +APTRELA+Q+E E A + + + GG I +Q ++ G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK----- 256
++V+ TPGR+ID L R L + ++VLDEAD+M+ +GF+ V +LD +P
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 257 ------------RQTLMFSATMPYEIKQLTRKYLNNPV--TIDLVGDSDQKLADGISLYS 302
R T MFSATMP +++L RKYL NPV TI G K D IS +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAG----KATDLISQHV 490
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQR 362
I+ K L L+ + IVF TK+ AD L+ ++ + + LHG SQ QR
Sbjct: 491 IMMKESEKNYNLHRLL-DQLNDKTAIVFVNTKKSADFLAKNL-EGYRVTTLHGGKSQDQR 548
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
E +L GFR +NVLVATDVA RG+DIP+V VI+YD+P N E++ HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 423 A 423
A
Sbjct: 609 A 609
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 205/361 (56%), Gaps = 29/361 (8%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+S+EI+ A+ K G PIQ A + +Q RD+IG A TG+GKT AF +P+ I +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 146 --AKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYG 201
++ P A+ +APTRELA+Q+E E A + + + GG I +Q ++ G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK----- 256
++V+ TPGR+ID L R L + ++VLDEAD+M+ +GF+ V +LD +P
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 257 ------------RQTLMFSATMPYEIKQLTRKYLNNPV--TIDLVGDSDQKLADGISLYS 302
R T MFSATMP +++L RKYL NPV TI G K D IS +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAG----KATDLISQHV 490
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQR 362
I+ K L L+ + IVF TK+ AD L+ ++ + + LHG SQ QR
Sbjct: 491 IMMKESEKNYNLHRLL-DQLNDKTAIVFVNTKKSADFLAKNL-EGYRVTTLHGGKSQDQR 548
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
E +L GFR +NVLVATDVA RG+DIP+V VI+YD+P N E++ HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 423 A 423
A
Sbjct: 609 A 609
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 205/361 (56%), Gaps = 29/361 (8%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+S+EI+ A+ K G PIQ A + +Q RD+IG A TG+GKT AF +P+ I +
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 146 --AKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYG 201
++ P A+ +APTRELA+Q+E E A + + + GG I +Q ++ G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 202 VDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK----- 256
++V+ TPGR+ID L R L + ++VLDEAD+M+ +GF+ V +LD +P
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 257 ------------RQTLMFSATMPYEIKQLTRKYLNNPV--TIDLVGDSDQKLADGISLYS 302
R T MFSATMP +++L RKYL NPV TI G K D IS +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAG----KATDLISQHV 490
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQR 362
I+ K L L+ + IVF TK+ AD L+ ++ + + LHG SQ QR
Sbjct: 491 IMMKESEKNYNLHRLL-DQLNDKTAIVFVNTKKSADFLAKNL-EGYRVTTLHGGKSQDQR 548
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
E +L GFR +NVLVATDVA RG+DIP+V VI+YD+P N E++ HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 423 A 423
A
Sbjct: 609 A 609
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 208/342 (60%), Gaps = 23/342 (6%)
Query: 101 KLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH----GRGRDPLA 156
K P+QR + ++ GRD++ A+TG+GKT AF PI I+ R PLA
Sbjct: 175 KPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRVARTAYPLA 234
Query: 157 LALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIID 214
L L+PTREL+ Q+ E + + + YGG PI+QQ+R+L+ GVD++V TPGR++D
Sbjct: 235 LILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVD 294
Query: 215 LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL----PPKRQTLMFSATMPYEI 270
LL R ++L+ ++++ LDEAD+ML +GF+ + KI++++ P RQTL+FSAT P EI
Sbjct: 295 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEI 354
Query: 271 KQLTRKYLNNPV--TIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITE------HA 322
++L +L + + + VG S +A + Y + +D K+ L L+ +
Sbjct: 355 QRLASDFLASYIFLAVGRVGSSTDLIAQRVE-YVLESD---KRSHLMDLLHAQRENDVNG 410
Query: 323 KGGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATD 381
K G +VF +TK+ AD L H + +HGD +Q +RE+ L F+ G+ +LVATD
Sbjct: 411 KQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATD 470
Query: 382 VASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
VA+RGLDIP V V+++DLPN+ + +VHR GRTGRAGK G A
Sbjct: 471 VAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 512
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 221/393 (56%), Gaps = 13/393 (3%)
Query: 66 DFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRART 125
DF EG K E ++GI ++++ + + G K IQ+ + P +QGRD+I +A++
Sbjct: 22 DFETTEGVKAIGSFE--EMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQS 79
Query: 126 GTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAP--NLDTI 183
GTGKT + + +++ + R+ AL ++PTRELA Q EK N+
Sbjct: 80 GTGKTSMIALTVC-QVVDTSV-----REVQALIVSPTRELASQTEKVILTIGDFINIQAH 133
Query: 184 CVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQ 243
GG + + +R+L++GV VV GTPGR+ D++ R L + ++ +VLDE+D+ML GF+
Sbjct: 134 ACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFK 193
Query: 244 EDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSI 303
+ + + LPP Q + SAT+P+EI ++T K++ +PV I + D+ +GI + +
Sbjct: 194 DQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRI--LVKRDELTLEGIKQFFV 251
Query: 304 VTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQR 362
+ + + + + ++F TKR D L+ M + + A+HGD+ Q +R
Sbjct: 252 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRER 311
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
+ + FR G VL+ TDV +RGLD+ V LVI+YDLPNN E+++HR GR+GR G+KG
Sbjct: 312 DAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 371
Query: 423 AILVHTEDQSRAIRTIERDVGSKFKELPKIAVD 455
AI D + +R IE+ ++ E+P D
Sbjct: 372 AINFVKSDDIKILRDIEQYYSTQIDEMPMNVAD 404
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 9/357 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+ G++ +I+ + K K PIQ L M GRD IG A+TG+GKTLAF +P+ + I
Sbjct: 507 QTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPML-RHI 565
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDY 200
K G P+ L +APTREL +Q+ + + + + VYGG+ ++QQ+ +L
Sbjct: 566 KDQPPVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKR 625
Query: 201 GVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
G ++VV TPGR+ID+L + NL+ V ++V+DEAD+M +GF+ + +I+ + P R
Sbjct: 626 GTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 685
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSAT P +++ L RK LN PV I + G S + I+ V + L L
Sbjct: 686 QTVLFSATFPRQVEILARKVLNKPVEIQVGGRS--VVNKDIAQLVEVRPENERFLRLLEL 743
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHS-MSKSLKCEALHGDISQAQRERTLAGFREGHFNV 376
+ E + GK +VF ++ D L M C +LHG Q RE T++ F+ N+
Sbjct: 744 LGEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
LVAT +A+RGLD+ ++LVI++D+PN+ E +VHR GRTGRAG+KG AI +E+ +R
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAR 860
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 218/382 (57%), Gaps = 13/382 (3%)
Query: 74 KNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAF 133
+N E K LG+ E +V A K G IQ + PA++G+D+IG A TG+GKT AF
Sbjct: 4 ENKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAF 63
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI +++ R A ++PTRELA Q+ ++F + C + GG +
Sbjct: 64 ALPILHALLE----APRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM 119
Query: 192 SQQMRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKIL 250
QQ ++ ++VGTPGR++D L N +L ++++VLDEAD++L F+E + +IL
Sbjct: 120 VQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL 179
Query: 251 DRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVK 310
+P +R+T +FSATM ++++L R L NPV I+ S D + + K
Sbjct: 180 GMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIET--SSKYSTVDTLKQQYRFLPAKHK 237
Query: 311 QGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEAL--HGDISQAQRERTLAG 368
L ++TE A G +VFT+T D+ RL + ++L +A+ +G +SQ +R L
Sbjct: 238 DCYLVYILTEMA-GSTSMVFTRTC-DSTRLLALILRNLGLKAIPINGHMSQPKRLGALNK 295
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
F+ G N+L+ TDVASRGLDIP VD+VI+YD+P NS+ ++HR GRT RAG+ G AI +
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
Query: 429 EDQSRAIRTIERDVGSKFKELP 450
+ + IE+ +G K E P
Sbjct: 356 QYELEWYVQIEKLIGKKLPEYP 377
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 218/382 (57%), Gaps = 13/382 (3%)
Query: 74 KNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAF 133
+N E K LG+ E +V A K G IQ + PA++G+D+IG A TG+GKT AF
Sbjct: 4 ENKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAF 63
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI +++ R A ++PTRELA Q+ ++F + C + GG +
Sbjct: 64 ALPILHALLE----APRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM 119
Query: 192 SQQMRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKIL 250
QQ ++ ++VGTPGR++D L N +L ++++VLDEAD++L F+E + +IL
Sbjct: 120 VQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL 179
Query: 251 DRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVK 310
+P +R+T +FSATM ++++L R L NPV I+ S D + + K
Sbjct: 180 GMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIET--SSKYSTVDTLKQQYRFLPAKHK 237
Query: 311 QGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEAL--HGDISQAQRERTLAG 368
L ++TE A G +VFT+T D+ RL + ++L +A+ +G +SQ +R L
Sbjct: 238 DCYLVYILTEMA-GSTSMVFTRTC-DSTRLLALILRNLGLKAIPINGHMSQPKRLGALNK 295
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
F+ G N+L+ TDVASRGLDIP VD+VI+YD+P NS+ ++HR GRT RAG+ G AI +
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
Query: 429 EDQSRAIRTIERDVGSKFKELP 450
+ + IE+ +G K E P
Sbjct: 356 QYELEWYVQIEKLIGKKLPEYP 377
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 211/360 (58%), Gaps = 26/360 (7%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+ E++ + + + K P+QR + A+ GRD++ A+TG+GKT AF PI I+K
Sbjct: 146 LHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDLMACAQTGSGKTAAFCFPIISGIMKER 205
Query: 146 AKHG---RGRD-------PLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQ 193
G RG P AL L+PTREL+ Q+ E + + VYGG PI Q
Sbjct: 206 LASGLLPRGGGVDSDVAFPTALILSPTRELSCQIHAEACKFAHQTGVKIAVVYGGAPIGQ 265
Query: 194 QMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
Q+R L+ GVD++V TPGR++DL+ R ++LK+++++ LDEAD+ML +GF+ + I+ ++
Sbjct: 266 QLRILERGVDILVATPGRLVDLIERERVSLKKIKYLALDEADRMLDMGFEHQIRNIVQQM 325
Query: 254 ----PPKRQTLMFSATMPYEIKQLTRKYLNNPV--TIDLVGDSDQKLADGISLYSIVTDS 307
P RQTL+FSAT P I++L +L+N V + VG S + + I
Sbjct: 326 HMPPPGDRQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVGSSTELIVQKIE----SVQD 381
Query: 308 YVKQGILAPLITEHAKGGK---CIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRE 363
K+ L L+ + GK +VF +TK+ AD L + + + + A+HGD Q +RE
Sbjct: 382 MEKRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKVQMERE 441
Query: 364 RTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
R L F+ G ++VATDVASRGLDIP+V VI++DLP + + +VHR GRTGRAG+ G A
Sbjct: 442 RALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLA 501
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 219/382 (57%), Gaps = 13/382 (3%)
Query: 74 KNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAF 133
+N E K LG+ E +V A K G IQ + PA++G+D+IG A+TG+GKT AF
Sbjct: 4 ENKEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAF 63
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI +++ R A ++PTRELA Q+ ++F + C + GG +
Sbjct: 64 ALPILHALLE----APRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM 119
Query: 192 SQQMRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKIL 250
QQ ++ ++VGTPGR++D L N +L ++++VLDEAD++L F+E + +IL
Sbjct: 120 VQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL 179
Query: 251 DRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVK 310
+P +R+T +FSATM ++++L R L NPV I+ S D + + K
Sbjct: 180 GMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIET--SSKYSTVDTLKQQYRFLPAKHK 237
Query: 311 QGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEAL--HGDISQAQRERTLAG 368
L +++E A G +VFT+T D+ RL + ++L +A+ +G +SQ +R L
Sbjct: 238 DCYLVYILSEMA-GSTSMVFTRTC-DSTRLLALILRNLGLKAIPINGHMSQPKRLGALNK 295
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
F+ G N+L+ TDVASRGLDIP VD+VI+YD+P NS+ ++HR GRT RAG+ G AI +
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
Query: 429 EDQSRAIRTIERDVGSKFKELP 450
+ + IE+ +G K E P
Sbjct: 356 QYELEWYVQIEKLIGKKLPEYP 377
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 208/367 (56%), Gaps = 13/367 (3%)
Query: 78 GLEIKK-------LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 130
G E+ K G + +I+ A+ K+G K IQ L + GRD+IG A+TG+GKT
Sbjct: 223 GFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKT 282
Query: 131 LAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQV--EKEFYDSAPNLDTICVYGG 188
AF +P+ I+ + + P+ + APTRELA Q+ E + + A + VYGG
Sbjct: 283 AAFVLPMIVHIMD-QPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGG 341
Query: 189 TPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEK 248
+Q ++L G ++VV TPGR+ID+L AL + ++VLDEAD+M +GF+ V
Sbjct: 342 MSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRS 401
Query: 249 ILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSY 308
I+ ++ P RQTL+FSATMP ++++L R+ L++P+ + VG+ D + ++
Sbjct: 402 IVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRV-TVGEVGMANEDITQVVQVIPSDS 460
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLA 367
K L + E G +VF K D + + + K ALHGD Q+ R L
Sbjct: 461 EKLPWLLEKLHEMIDQGDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQ 520
Query: 368 GFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG-KKGTAILV 426
F+ G ++VL+ATDVA+RGLDI ++ V+++D+ + ++ VHR GRTGRAG K G A +
Sbjct: 521 KFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTL 580
Query: 427 HTEDQSR 433
T+ ++R
Sbjct: 581 ITQKEAR 587
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 204/372 (54%), Gaps = 15/372 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ + G K IQ+ + P ++G D+I +A++GTGKT F I ++
Sbjct: 45 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQL-D 103
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
++ + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 104 YSVTECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILSS 157
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I LP K Q
Sbjct: 158 GVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVG 217
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTD-SYVKQGILAPLIT 319
+FSATMP E ++TRK++N PV I + D+ +GI + + D K L L
Sbjct: 218 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLY- 274
Query: 320 EHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLV 378
E + ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL+
Sbjct: 275 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 334
Query: 379 ATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
TD+ +RG+D+ V LVI+YDLP E ++HR GR+GR G+KG AI T D R + I
Sbjct: 335 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDI 394
Query: 439 ERDVGSKFKELP 450
++ +ELP
Sbjct: 395 QKFYNVLIEELP 406
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 183/308 (59%), Gaps = 13/308 (4%)
Query: 105 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRE 164
IQ + A+ GRD++G A TG+GKT AF IP+ + RG PLAL LAPTRE
Sbjct: 142 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLA-QPPIRRGDGPLALVLAPTRE 200
Query: 165 LAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGAL 221
LA+Q+EKE F S + T V GGT I +Q +L GV++ V TPGR ID L +G
Sbjct: 201 LAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNT 260
Query: 222 NLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNP 281
+L + ++VLDEAD+ML +GF+ + +I+ LP K QTL+FSATMP EI+ L+++YL +P
Sbjct: 261 SLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASP 320
Query: 282 VTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKC-------IVFTQTK 334
V + VG + V+++ +L L+ E ++ KC IVF + K
Sbjct: 321 VQVK-VGKVSSPTTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERK 379
Query: 335 RDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVD 393
D ++ ++ ++ L +LHG SQ++RE L FR ++LVATDVASRGLD+ V
Sbjct: 380 TRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVS 439
Query: 394 LVIHYDLP 401
VI+ DLP
Sbjct: 440 HVINLDLP 447
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 203/371 (54%), Gaps = 13/371 (3%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G++E ++ + G K IQ+ + P +G D+I +A++GTGKT F + ++
Sbjct: 45 MGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-D 103
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
+N + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 104 YNVTQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILST 157
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L+ ++ VLDEAD+ML GF++ + I LP K Q
Sbjct: 158 GVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITE 320
+FSATMP E ++TRK++N PV I LV + L Y V K L L E
Sbjct: 218 VFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLY-E 275
Query: 321 HAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLVA 379
+ ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL+
Sbjct: 276 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 335
Query: 380 TDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIE 439
TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T++ +R I+
Sbjct: 336 TDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQ 395
Query: 440 RDVGSKFKELP 450
+ +ELP
Sbjct: 396 KFYNVLVEELP 406
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 205/372 (55%), Gaps = 15/372 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G++E ++ + G K IQ+ + P +G D+I +A++GTGKT F + ++
Sbjct: 62 MGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-D 120
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
+N + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 121 YNVTQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILST 174
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L+ ++ VLDEAD+ML GF++ + I LP K Q
Sbjct: 175 GVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 234
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGI-SLYSIVTDSYVKQGILAPLIT 319
+FSATMP E ++TRK++N PV I + D+ +GI Y V K L L
Sbjct: 235 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLY- 291
Query: 320 EHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVLV 378
E + ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL+
Sbjct: 292 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 351
Query: 379 ATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
TD+ +RG+D+ V LVI++DLP E ++HR GR+GR G+KG AI T++ +R I
Sbjct: 352 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDI 411
Query: 439 ERDVGSKFKELP 450
++ +ELP
Sbjct: 412 QKFYNVLVEELP 423
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 208/378 (55%), Gaps = 17/378 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ + G K IQ+ + P ++G D+I +A++GTGKT F I ++
Sbjct: 29 MGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQL-- 86
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
+G + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 87 ---DYGLVQCQ-ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQT 141
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I LPPK Q
Sbjct: 142 GVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 201
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL--I 318
+FSATMP E ++TRK++N PV I + D+ +GI + + D ++ L L +
Sbjct: 202 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVDK--EEWKLETLCDL 257
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
E + ++F T+R D L+ M + A HGD+ Q R+ + FR G VL
Sbjct: 258 YETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 317
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRT 437
+ TD+ +RG+D+ V LVI+YDLP E ++HR GR+GR G+KG AI T + +R +
Sbjct: 318 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLAD 377
Query: 438 IERDVGSKFKELPKIAVD 455
I++ +ELP D
Sbjct: 378 IQKFYNVIVEELPSNVAD 395
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 208/378 (55%), Gaps = 17/378 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ + G K IQ+ + P ++G D+I +A++GTGKT F I ++
Sbjct: 45 MGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQL-- 102
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
+G + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 103 ---DYGLVQCQ-ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQT 157
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVVGTPGR+ D+L R +L ++ VLDEAD+ML GF++ + I LPPK Q
Sbjct: 158 GVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 217
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL--I 318
+FSATMP E ++TRK++N PV I + D+ +GI + + D ++ L L +
Sbjct: 218 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVDK--EEWKLETLCDL 273
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
E + ++F T+R D L+ M + A HGD+ Q R+ + FR G VL
Sbjct: 274 YETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRT 437
+ TD+ +RG+D+ V LVI+YDLP E ++HR GR+GR G+KG AI T + +R +
Sbjct: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLAD 393
Query: 438 IERDVGSKFKELPKIAVD 455
I++ +ELP D
Sbjct: 394 IQKFYNVIVEELPSNVAD 411
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 201/366 (54%), Gaps = 23/366 (6%)
Query: 82 KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI---- 137
K + + I+ L KGI + PIQ L + GRDMIG A TG+GKTL F +P+
Sbjct: 147 KDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMA 206
Query: 138 KDKIIKFNAKHGRGRDPLALALAPTRELAKQ---VEKEFY-----DSAPNLDTICVYGGT 189
+ I G G P L + P+RELA+Q V +EF P L + GG
Sbjct: 207 MQEEIMMPIVPGEG--PFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGI 264
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ Q+ + GV +VV TPGR+ D+L + +NL +++ LDEAD+++ +GF++D+ ++
Sbjct: 265 DMRSQLEIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREV 324
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV 309
D +RQTL+FSATMP +I+ R L P+ ++ VG A +L I YV
Sbjct: 325 FDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVN-VGR-----AGAANLDVIQEVEYV 378
Query: 310 KQ--GILAPLITEHAKGGKCIVFTQTKRDADRL-SHSMSKSLKCEALHGDISQAQRERTL 366
KQ I+ L ++F + K D D + + + K ++ A+HG Q +RE +
Sbjct: 379 KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAI 438
Query: 367 AGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+ F+ G +VLVATDVAS+GLD P++ VI+YD+P E +VHR GRTGR GK G A
Sbjct: 439 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 498
Query: 427 HTEDQS 432
++QS
Sbjct: 499 INKNQS 504
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 208/378 (55%), Gaps = 17/378 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
+G+ E ++ + G + IQ+ + P +G D+I +A++GTGKT F I ++
Sbjct: 45 MGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 102
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDT---ICVYGGTPISQQMRQLDY 200
+G + AL LAPTRELA+Q+EK L CV GGT + + R L
Sbjct: 103 ---DYGLVQ-CQALVLAPTRELAQQIEKVMRALGDFLGVKVHACV-GGTSVREDQRILQA 157
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
GV VVGTPGR+ D+L R +L + ++ VLDEAD+ML GF++ + I +LP K Q
Sbjct: 158 GVHTVVGTPGRVFDMLRRQSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKIQVG 217
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL--I 318
+FSATMP E ++TRK++N PV I + D+ +GI + + D ++ L L +
Sbjct: 218 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVDK--EEWKLETLCDL 273
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSM-SKSLKCEALHGDISQAQRERTLAGFREGHFNVL 377
E + ++F T+R D L+ M S+ A HGD+ Q R+ + FR G VL
Sbjct: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 333
Query: 378 VATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRT 437
+ TD+ +RG+D+ V LVI+YDLP E ++HR GR+GR G+KG +I T + +R +
Sbjct: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARMLAD 393
Query: 438 IERDVGSKFKELPKIAVD 455
I++ +ELP D
Sbjct: 394 IQKFYNVTIEELPSNVAD 411
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 210/385 (54%), Gaps = 16/385 (4%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + E++ + +KG + PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 138 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIP 197
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQQ 194
+KI + N + L PTRELA Q + + +L + GGT +
Sbjct: 198 ALEKIDQDNNIIQ------VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDD 251
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ +E+++ LP
Sbjct: 252 IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLP 311
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
P RQ LMFSAT P +K +YL P I+L+ D+ GI+ + + K L
Sbjct: 312 PTRQILMFSATFPVTVKDFKDRYLRKPYIINLM---DELTLKGITQFYAFVEERQKVHCL 368
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGH 373
L ++ + + I+F + + L+ +++ C +H + Q R R FR G
Sbjct: 369 NTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 427
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQS 432
LV TD+ +RG+DI V++VI++D P NSE ++HR GR+GR G G A+ L+ ED+
Sbjct: 428 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRF 487
Query: 433 RAIRTIERDVGSKFKELPKIAVDRA 457
R IE+++G++ K++P +D+A
Sbjct: 488 NLYR-IEQELGTEIKQIPPF-IDQA 510
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 210/385 (54%), Gaps = 16/385 (4%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + E++ + +KG + PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 140 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIP 199
Query: 137 IKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQQ 194
+KI + N + L PTRELA Q + + +L + GGT +
Sbjct: 200 ALEKIDQDNNIIQ------VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDD 253
Query: 195 MRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
+ +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L FQ +E+++ LP
Sbjct: 254 IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLP 313
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
P RQ LMFSAT P +K +YL P I+L+ D+ GI+ + + K L
Sbjct: 314 PTRQILMFSATFPVTVKDFKDRYLRKPYIINLM---DELTLKGITQFYAFVEERQKVHCL 370
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGH 373
L ++ + + I+F + + L+ +++ C +H + Q R R FR G
Sbjct: 371 NTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 429
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQS 432
LV TD+ +RG+DI V++VI++D P NSE ++HR GR+GR G G A+ L+ ED+
Sbjct: 430 CRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRF 489
Query: 433 RAIRTIERDVGSKFKELPKIAVDRA 457
R IE+++G++ K++P +D+A
Sbjct: 490 NLYR-IEQELGTEIKQIPPF-IDQA 512
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 201/366 (54%), Gaps = 23/366 (6%)
Query: 82 KKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI---- 137
K + + I+ L KGI + PIQ L + GRDMIG A TG+GKTL F +P+
Sbjct: 149 KDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMA 208
Query: 138 KDKIIKFNAKHGRGRDPLALALAPTRELAKQ---VEKEFY-----DSAPNLDTICVYGGT 189
+ I+ G G P L + P+ ELA+Q V ++F P L + GG
Sbjct: 209 MQEEIRMPIVPGEG--PFGLIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGI 266
Query: 190 PISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKI 249
+ Q++ + GV +VV TPGR+ D+L + +NL +++ LDEAD+++ GF++D+ ++
Sbjct: 267 DMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDPGFEDDIREV 326
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYV 309
D +RQTL+FSATMP +I+ R L P+ ++ VG A +L I YV
Sbjct: 327 FDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVN-VGR-----AGAANLDVIQEVEYV 380
Query: 310 KQ--GILAPLITEHAKGGKCIVFTQTKRDADRL-SHSMSKSLKCEALHGDISQAQRERTL 366
KQ I+ L ++F + K D D + + + K ++ A+HGD Q RE +
Sbjct: 381 KQEAKIVYLLECLQKTPPPVLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAI 440
Query: 367 AGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+ F+ G +VLVATD+AS+GLD P++ VI+YD+P E +VHR GRTGR GK G A
Sbjct: 441 SSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
Query: 427 HTEDQS 432
++Q+
Sbjct: 501 INKNQT 506
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 183/302 (60%), Gaps = 9/302 (2%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG- 149
+ +AK G + PIQ A+ GRD+IG A TG+GKTL++ +P I+ +A+
Sbjct: 213 LDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLP---AIVHVSAQPRL 269
Query: 150 -RGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
+G P+ L LAPTRELA Q+++E + S N+ C+YGG P Q+R L GV++V+
Sbjct: 270 VQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR+ID+L NL+ V ++VLDEAD+ML +GF+ + KI++++ P RQTL +SAT
Sbjct: 330 ATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATW 389
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P E++ L R++L+NP + ++G K I+ V K L L+ E G +
Sbjct: 390 PKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSR 448
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
++FT+TK+ D+++ + ++HGD +QA+R+ LA F+ G ++ ATDVA+R
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 386 GL 387
GL
Sbjct: 509 GL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 183/302 (60%), Gaps = 9/302 (2%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG- 149
+ +AK G + PIQ A+ GRD+IG A TG+GKTL++ +P I+ +A+
Sbjct: 213 LDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLP---AIVHVSAQPRL 269
Query: 150 -RGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
+G P+ L LAPTRELA Q+++E + S N+ C+YGG P Q+R L GV++V+
Sbjct: 270 VQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR+ID+L NL+ V ++VLDEAD+ML +GF+ + KI++++ P RQTL +SAT
Sbjct: 330 ATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATW 389
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P E++ L R++L+NP + ++G K I+ V K L L+ E G +
Sbjct: 390 PKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSR 448
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
++FT+TK+ D+++ + ++HGD +QA+R+ LA F+ G ++ ATDVA+R
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 386 GL 387
GL
Sbjct: 509 GL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 183/302 (60%), Gaps = 9/302 (2%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG- 149
+ +AK G + PIQ A+ GRD+IG A TG+GKTL++ +P I+ +A+
Sbjct: 213 LDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLP---AIVHVSAQPRL 269
Query: 150 -RGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
+G P+ L LAPTRELA Q+++E + S N+ C+YGG P Q+R L GV++V+
Sbjct: 270 VQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR+ID+L NL+ V ++VLDEAD+ML +GF+ + KI++++ P RQTL +SAT
Sbjct: 330 ATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATW 389
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P E++ L R++L+NP + ++G K I+ V K L L+ E G +
Sbjct: 390 PKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSR 448
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
++FT+TK+ D+++ + ++HGD +QA+R+ LA F+ G ++ ATDVA+R
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 386 GL 387
GL
Sbjct: 509 GL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 183/302 (60%), Gaps = 9/302 (2%)
Query: 91 VSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG- 149
+ +AK G + PIQ A+ GRD+IG A TG+GKTL++ +P I+ +A+
Sbjct: 213 LDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLP---AIVHVSAQPRL 269
Query: 150 -RGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYGVDVVV 206
+G P+ L LAPTRELA Q+++E + S N+ C+YGG P Q+R L GV++V+
Sbjct: 270 VQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 207 GTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATM 266
TPGR+ID+L NL+ V ++VLDEAD+ML +GF+ + KI++++ P RQTL +SAT
Sbjct: 330 ATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATW 389
Query: 267 PYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGK 326
P E++ L R++L+NP + ++G K I+ V K L L+ E G +
Sbjct: 390 PKEVESLARQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSR 448
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
++FT+TK+ D+++ + ++HGD +QA+R+ LA F+ G ++ ATDVA+R
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 386 GL 387
GL
Sbjct: 509 GL 510
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 211/386 (54%), Gaps = 18/386 (4%)
Query: 77 EGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP 136
+G E + + E++ + +KG + PIQ + A+ G D++ RA+ GTGKT AF IP
Sbjct: 147 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIP 206
Query: 137 IKDKIIKFNAKHGRGRDPLALA-LAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQ 193
+KI + ++ + + L PTRELA Q + + +L + GGT +
Sbjct: 207 ALEKI-------DQDKNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKD 259
Query: 194 QMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
+ +L V ++VGTPGRI+DL +G LK+ +V+DEAD++L F+ +E+++ L
Sbjct: 260 DIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFL 319
Query: 254 PPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGI 313
P RQ L+FSAT P +K +YL P I+L+ D+ GI+ + + K
Sbjct: 320 PSNRQILLFSATFPVTVKDFNDRYLRKPYIINLM---DELTLKGITQFYAFVEERQKVHC 376
Query: 314 LAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREG 372
L L ++ + + I+F + + L+ +++ C +H + Q R R FR G
Sbjct: 377 LNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 435
Query: 373 HFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQ 431
LV TD+ +RG+DI V++VI++D P NSE ++HR GR+GR G G A+ LV ED+
Sbjct: 436 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLVTYEDR 495
Query: 432 SRAIRTIERDVGSKFKELPKIAVDRA 457
R IE+++G++ K++P +D+A
Sbjct: 496 FNLYR-IEQELGTEIKQIPPF-IDQA 519
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 207/371 (55%), Gaps = 11/371 (2%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+L +S ++ A G SK PIQ A + A+ GRD+ G A TG+GKT AF +P ++++
Sbjct: 155 QLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLL 214
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDY 200
F K R L L PTRELA QV+ + D C + GG +Q L
Sbjct: 215 -FRPK--RVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVALRS 271
Query: 201 GVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQT 259
D+VV TPGR+ID L N +++L ++ ++LDEAD++L++GF ++++++ P KRQT
Sbjct: 272 RPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKKRQT 331
Query: 260 LMFSATMPYEIKQLTRKYLNNPVTI--DLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
++FSATM E+ L + L+ P+ + D + L + + + + + +LA
Sbjct: 332 MLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLLA-- 389
Query: 318 ITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFNV 376
+ K I+F+ TK+ A RL S LK LHG+++QAQR L FR+ +
Sbjct: 390 MCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLGALEEFRKQQVDF 449
Query: 377 LVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIR 436
LVATDVA+RGLDI V VI++ P + +VHR GRT RAG+ G+A+ T++ ++
Sbjct: 450 LVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDNDRSLLK 509
Query: 437 TIERDVGSKFK 447
I + GSK K
Sbjct: 510 AIAKRAGSKLK 520
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 205/373 (54%), Gaps = 14/373 (3%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+L +S ++ A G +K PIQ A + A+ GRD+ G A TG+GKT AF +P ++++
Sbjct: 144 QLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLL 203
Query: 143 KFNAKHGRGRDPL-ALALAPTRELAKQVE---KEFYDSAPNLDTICVYGGTPISQQMRQL 198
F K G + L L PTRELA QV +E N+ + GG P Q L
Sbjct: 204 -FRPK---GVHAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGGVPTKGQEAAL 259
Query: 199 DYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
D+VV TPGR+ID L N +++L ++ ++LDEAD++L++GF ++++++ P KR
Sbjct: 260 RSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRVCPKKR 319
Query: 258 QTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPL 317
QT++FSATM E+ L + L+ PV L D K ++ + + A L
Sbjct: 320 QTMLFSATMTEEVDDLIKLSLSKPVR--LSADPSAKRPASLTEEVVRIRRMREVNHEAVL 377
Query: 318 ITEHAKG--GKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHF 374
+ K K I+F+ TK+ A RL S LK LHG+++QAQR L FR+
Sbjct: 378 LAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDALEQFRKQQV 437
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRA 434
+ LVATDVA+RGLDI V VI++ P + +VHR GRT RAG+ G+A+ T+
Sbjct: 438 DFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDSDRSL 497
Query: 435 IRTIERDVGSKFK 447
++ I + GSK K
Sbjct: 498 LKAIAKRAGSKLK 510
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 198/363 (54%), Gaps = 25/363 (6%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+SE ++ AL P+Q A + +D+ A TG+GKTLAF IP+ + I++ N
Sbjct: 22 LSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLVE-ILRRN 80
Query: 146 AKHGRGRDPLALALAPTRELAKQ---VEKEFYDSAPNLDTICVYGGTPISQQMRQLDY-G 201
A + + L + ++PTRELA Q V + F + N+ ++ + GG + +++++ G
Sbjct: 81 ASNPKPHQVLGVIISPTRELASQIYHVAQPFISTLANVKSMLLVGGVEVKADIKKIEEEG 140
Query: 202 VDVVVGTPGRIIDLLNR-GALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTL 260
+V++GTPGR+ D++NR L+ K + ++LDEAD++L +GFQ+ + I+ LP R+T
Sbjct: 141 ANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITELPKLRRTG 200
Query: 261 MFSATMPYEIKQLTRKYLNNPVTIDLVGDS-------------DQKLADGISLYSIVTDS 307
+FSAT +++L + L NPV +++ ++ K G+ + + ++
Sbjct: 201 LFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESSKTPSGLQIEYLECEA 260
Query: 308 YVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSH-----SMSKSLKCEALHGDISQAQR 362
K L + ++ + K I++ T D S+ K +LHG + Q+ R
Sbjct: 261 DKKPSQLVDFLVKN-RSKKIIIYFMTCACVDYWGLVLPRLSVLKGFSLISLHGKMKQSVR 319
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
E+ L F +L+ TDVA+RGLDIP VD ++ YD P + +FVHR GRT R GK+G
Sbjct: 320 EKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGH 379
Query: 423 AIL 425
A++
Sbjct: 380 AVV 382
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 195/365 (53%), Gaps = 18/365 (4%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
LG+SE V + G+ +Q+ + + GR +IG +TG+GKT AF +PI ++
Sbjct: 57 LGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRL-- 114
Query: 144 FNAKHGRGRDPLALALAPTRELAKQVEKEF--YDSAPNLDTICVYGGTPISQQMRQLDYG 201
A+H G AL + PTRELA Q+ ++F S+ L V GG + +Q ++L
Sbjct: 115 --AEHTFG--VFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVAR 170
Query: 202 VDVVVGTPGRIIDLLNRG---ALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQ 258
+V+ TPGRI LL A +F+VLDEAD++L +GFQ++++ I LP RQ
Sbjct: 171 PHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQ 230
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLI 318
L FSAT +++L +Y + + K + + + VK L ++
Sbjct: 231 NLFFSATTTSNLQKLRERYQDKLYAFE--AYEGFKTVENLKQQVVFIPKNVKDVYLLHIL 288
Query: 319 TEHAKGG--KCIVFTQTKRDADRLSHSMSKSLKCEA--LHGDISQAQRERTLAGFREGHF 374
++ G IVF T RD RL + M + L EA L+ SQAQR L F+ G
Sbjct: 289 SKMEDMGIRSAIVFVSTCRDCHRL-NLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKV 347
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRA 434
VL+ATDVA RGLDIP VDLVI+YD+P ++HR GRT RAG+ G A+ + T++
Sbjct: 348 PVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDL 407
Query: 435 IRTIE 439
IR IE
Sbjct: 408 IREIE 412
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 191/350 (54%), Gaps = 21/350 (6%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
LG++ ++ S + +KG PIQR + + G D++ ARTG+GKT AF +P+ ++ +
Sbjct: 23 LGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHRLNQ 82
Query: 144 FNAKHG-RGRDPLALALAPTRELAKQVEK------EFYDSAPNLDTICVYGGTPISQQMR 196
+ G RG L L+PTR+LA+Q K F D L + GG + Q
Sbjct: 83 HVPQGGVRG-----LILSPTRDLAQQTLKFTKELGHFTD----LRVSLLVGGDSMESQFE 133
Query: 197 QLDYGVDVVVGTPGRIIDLLNR-GALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPP 255
+L D+++ TPGR++ L+ ++L++V+++V DEAD + +GF E + +IL +L
Sbjct: 134 ELAQNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGE 193
Query: 256 KRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTL+FSAT+P + + + L +P + L D + K++ + L K L
Sbjct: 194 NRQTLLFSATLPSALAEFAKAGLRDPRLVRL--DLETKISPDLKLVFFTLRQEEKYAALL 251
Query: 316 PLITEH-AKGGKCIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGH 373
LI E + ++F TK + L+ + ++ +GD+ Q R+ +A FR
Sbjct: 252 YLIRELIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRK 311
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
+L+ TD+A+RG+DIP +D VI++D P +IFVHR GR RAG+ GTA
Sbjct: 312 TMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTA 361
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 197/368 (53%), Gaps = 20/368 (5%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKI-- 141
LG+SE A+A + + IQ + P + G+D++G ARTG+GKTLAF IP + +
Sbjct: 95 LGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPAVELLYN 154
Query: 142 IKFNAKHGRGRDPLALALAPTRELAKQ---VEKEFYDSAPNLDTICVYGGTPISQQMRQL 198
++F ++G G + + PTRELA Q V E + V GG + ++
Sbjct: 155 VQFTPRNGTG----VIVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKGEAERI 210
Query: 199 DYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR 257
GV++++ TPGR++D L N K ++ +++DEAD++L+ F+E++++IL+ LP KR
Sbjct: 211 VKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPKKR 270
Query: 258 QTLMFSATMPYEIKQLTR-KYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAP 316
QT +FSAT +++ L R + PV +D+ ++ +G+ +V + +L
Sbjct: 271 QTALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPCAKRFVVLYS 330
Query: 317 LITEHAKGGKCIVF----TQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREG 372
+ + + K +VF K AD L L C +HG Q R T F +
Sbjct: 331 FLKRY-QSKKVMVFFSSCNSVKFHADLLKFI---GLDCLNIHGKQKQNSRTSTFFNFCKA 386
Query: 373 HFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRA-GKKGTAILVHTEDQ 431
+L+ TDVA+RGLDIP VD ++ +D P+ + ++HR GRT R G KG A+L ++
Sbjct: 387 EKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEE 446
Query: 432 SRAIRTIE 439
+ +R ++
Sbjct: 447 LQFLRYLK 454
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 195/355 (54%), Gaps = 19/355 (5%)
Query: 91 VSALAKKGI-----SKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
VS L+ KG+ K+ +Q A L ++G+D++ +A+TGTGKT+AF +P + ++K
Sbjct: 108 VSPLSLKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP 167
Query: 146 AKH-GRGRDP-LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDY 200
+ G+ + P L L + PTRELA Q E P + V GGT +S + +++
Sbjct: 168 PNNRGQNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQKRIQK 227
Query: 201 G-VDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK 256
+++ TPGR+ D + A L V+ +VLDEADQ+L +GF++D+EKI+ +P +
Sbjct: 228 NPCQILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKIIASVPKQ 287
Query: 257 RQTLMFSATMPYEIKQLTRKYLNNPVT-IDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTLMFSAT+P + Q+ L I+ V + ++ + ++ +L+
Sbjct: 288 RQTLMFSATIPDAVHQVCNVALKKDFEFINTVQEGTEETHSQVRQMHLIAPLDKHFSLLS 347
Query: 316 PLITEHAKGG---KCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFRE 371
++ EH K +VF T +++ + K +L +H +Q+ R R FR+
Sbjct: 348 VILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVSDEFRK 407
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+LV +DV++RG+D P+V LV+ LP + + ++HR GRTGR GK+G IL+
Sbjct: 408 SKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILL 462
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 193/360 (53%), Gaps = 21/360 (5%)
Query: 93 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKI--IKFNAKHGR 150
A+ G L IQ + P + G+D++G ARTG+GKTLAF IP + + +KFN + G
Sbjct: 110 AIVDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGT 169
Query: 151 GRDPLALALAPTRELAKQ---VEKEFYDSAPNLDTI-CVYGGTPISQQMRQLDYGVDVVV 206
G + + PTRELA Q V ++ + T+ V GG+ + L G+++VV
Sbjct: 170 G----VVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVV 225
Query: 207 GTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSAT 265
TPGR++D L N ++ +++DEAD++L+ F++++++I+ LP RQT +FSAT
Sbjct: 226 ATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSAT 285
Query: 266 MPYEIKQLTR-KYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKG 324
+++ L R + P+ ID V D +K+ + L V K+ ++ + K
Sbjct: 286 QTKKVEDLARLSFQTTPIYID-VDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKS 344
Query: 325 GKCIVF----TQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVAT 380
K +VF K AD +H L C +++G Q R T F + +L+ T
Sbjct: 345 KKVMVFFSSCNSVKFHADIFNHI---HLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCT 401
Query: 381 DVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGK-KGTAILVHTEDQSRAIRTIE 439
DVA+RGLDIP+VD ++ YD P+ + ++HR GRT R KG A+L ++ + +R ++
Sbjct: 402 DVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQFLRYLK 461
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 209/434 (48%), Gaps = 77/434 (17%)
Query: 64 VADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVL-EPAMQGRDMIGR 122
V D EE E +L + ++ A+ K G + PIQ+A + A QG+D+IG
Sbjct: 147 VKDSVDEENIDETEYYAWNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGA 206
Query: 123 ARTGTGKTLAFGIPIKDKIIKFNAK----HGRGRDPLA-----------LALAPTRELAK 167
A TG+GKTLAFG+PI ++++ K G + A L +APTRELA
Sbjct: 207 AETGSGKTLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELAL 266
Query: 168 QVEKEFYDSAP--NLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKE 225
QV K A N+ + GG +Q R L ++VV TPGR+ +L++ G +L E
Sbjct: 267 QVAKHLKAVAKHINVRVTAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEKHLIE 326
Query: 226 VQ---FMVLDEADQMLQIGFQEDVEKILDRLP------------------------PKRQ 258
+ F VLDEAD+M+Q G ++++ I+D LP KRQ
Sbjct: 327 LHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQ 386
Query: 259 TLMFSATMPY-------------EIKQLTRKYLN-------------NPVTIDLVGDSDQ 292
TL+FSAT+ + KQL+ L+ N IDL S
Sbjct: 387 TLVFSATVALSADFRKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPS-- 444
Query: 293 KLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSL--KC 350
LA I I K L ++T H +G + IVF T A R S+ + L
Sbjct: 445 ILAAKIEESFIECTEDDKDAHLYYILTVHGQG-RTIVFC-TSIAALRHISSILRILGVNV 502
Query: 351 EALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHR 410
LH + Q R + + FRE +LVATDVA+RGLDIP V V+HY LP+++E++VHR
Sbjct: 503 WTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHR 562
Query: 411 SGRTGRAGKKGTAI 424
SGRT RA +G +I
Sbjct: 563 SGRTARASAEGCSI 576
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 195/368 (52%), Gaps = 38/368 (10%)
Query: 85 GISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKF 144
IS + AL+ G + + +Q L ++G D++ +A+TGTGKT AF +P + ++K
Sbjct: 293 AISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIETVLKA 352
Query: 145 NAKHGRGRDP--LALALAPTRELAKQVEKEF-----YDSAPNLDTICVYGGTPISQQMRQ 197
+ R P L L PTRELA Q+ E Y + T+ GG ++
Sbjct: 353 MSSKTSHRAPPIYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLV--GGVRFKVDQKR 410
Query: 198 LDYG-VDVVVGTPGRIIDLL-NRGALNLK--EVQFMVLDEADQMLQIGFQEDVEKILDRL 253
L+ ++V TPGR++D + N+ ++++ +Q ++LDEAD +L +GF++D+EKI+D L
Sbjct: 411 LESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKDIEKIVDCL 470
Query: 254 PPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQG- 312
P +RQ+L+FSAT+P E++++++ LV + K D + + + T VKQ
Sbjct: 471 PRQRQSLLFSATIPKEVRRVSQ----------LVLKREHKYVDTVGMGCVETPVQVKQSY 520
Query: 313 ILAP----------LITEHAKGG---KCIVFTQTKRDADRLSHSM-SKSLKCEALHGDIS 358
++AP ++ EH K IVF T H + L +H
Sbjct: 521 LIAPHESHFQIVHHILKEHISQTPDYKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKP 580
Query: 359 QAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG 418
Q R R F+E +LV++DV SRG++ P+V LVI +P++ E ++HR GRTGR G
Sbjct: 581 QLYRTRVSDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG 640
Query: 419 KKGTAILV 426
K+G IL+
Sbjct: 641 KEGKGILL 648
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 193/355 (54%), Gaps = 19/355 (5%)
Query: 91 VSALAKKGI-----SKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
VS L+ KG+ K+ +Q A L ++G+D++ +A+TGTGKT+AF +P + ++K
Sbjct: 112 VSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP 171
Query: 146 -AKHGRGRDP-LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPI-SQQMRQLD 199
+ G+ + P L L + PTRELA+Q E P + V GGT I S+Q R
Sbjct: 172 PSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQK 231
Query: 200 YGVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK 256
++V TPGR+ D + + A NL ++ V+DEAD++L +GF++D+E+I+ +P +
Sbjct: 232 NPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIITSVPKQ 291
Query: 257 RQTLMFSATMPYEIKQLTRKYLNNPVT-IDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTLMFSAT+P + Q+ L I+ V + ++ + ++ +L+
Sbjct: 292 RQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKHFSLLS 351
Query: 316 PLITEHAKGG---KCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFRE 371
++ EH K +VF T ++ + K L ++ Q R R FR+
Sbjct: 352 VILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFRK 411
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+LV +DV++RG+D P+V LV+ +P + E+++HR GRTGR GK+G IL+
Sbjct: 412 SKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILL 466
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 192/378 (50%), Gaps = 31/378 (8%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI------- 108
Query: 149 GRGRDPL-----ALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDY 200
DP+ AL L TRELA Q+ EF + P+L YGG I L
Sbjct: 109 ----DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 201 GV-DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQ 258
+VVGTPGRI+ L L+LK V+ VLDE D+ML+ + ++DV+ I P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLI 318
+MFSAT+ EI+ + +K++ +P+ I V D + G+ + I K L L+
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLL 283
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHF 374
+ + ++F ++ A L + ++C +H +SQ +R + GF+EGH
Sbjct: 284 -DALDFNQVVIFVKSVSRAAELDRLL---IECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSR 433
+LVATD+ RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVD 399
Query: 434 AIRTIERDVGSKFKELPK 451
+ ++ K+LP+
Sbjct: 400 VLNNVQSRFEIDIKQLPE 417
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 192/378 (50%), Gaps = 31/378 (8%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI------- 108
Query: 149 GRGRDPL-----ALALAPTRELAKQVEKEFYDSA---PNLDTICVYGGTPISQQMRQLDY 200
DP+ AL L TRELA Q+ EF + P+L YGG I L
Sbjct: 109 ----DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 201 GV-DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQ 258
+VVGTPGRI+ L L+LK V+ VLDE D+ML+ + ++DV+ I P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLI 318
+MFSAT+ EI+ + +K++ +P+ I V D + G+ + I K L L+
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLL 283
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHF 374
+ + ++F ++ A L + ++C +H +SQ +R + GF+EGH
Sbjct: 284 -DALDFNQVVIFVKSVSRAAELDRLL---IECNFPSICIHSGMSQEERLKRYRGFKEGHS 339
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSR 433
+LVATD+ RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVD 399
Query: 434 AIRTIERDVGSKFKELPK 451
+ ++ K+LP+
Sbjct: 400 VLNNVQSRFEIDIKQLPE 417
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 193/378 (51%), Gaps = 31/378 (8%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 133 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI------- 185
Query: 149 GRGRDPL-----ALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPISQQMRQLDY 200
DP+ AL L TRELA Q+ E F P++ YGG I L
Sbjct: 186 ----DPVPGQVAALVLCHTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKDLLKN 241
Query: 201 GV-DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQ 258
+VVGTPGRI+ L L LK V+ +LDE D+ML+ + ++DV++I P +Q
Sbjct: 242 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTPHDKQ 301
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLI 318
+MFSAT+ EI+ + +K++ +P+ I V D + G+ + I K L L+
Sbjct: 302 VMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQEPEKNRKLNDLL 360
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCE----ALHGDISQAQRERTLAGFREGHF 374
+ + ++F ++ A L+ + ++C +H +SQ +R + GF+EG
Sbjct: 361 -DALDFNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLKRYKGFKEGKQ 416
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSR 433
+LVATD+ RG+DI V++VI+YD+P++++ ++HR GR GR G KG AI V + S
Sbjct: 417 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAGDSE 476
Query: 434 AIRTIERDVGSKFKELPK 451
+ ++ KELP+
Sbjct: 477 VLNQVQSRFEVDIKELPE 494
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 187/355 (52%), Gaps = 19/355 (5%)
Query: 91 VSALAKKGI-----SKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
VS L+ KGI K+ +Q A L ++G+D++ +A+TGTGKT+AF +P + ++K
Sbjct: 207 VSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP 266
Query: 146 AKHGRGRDP--LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPIS-QQMRQLD 199
R P L + PTRELA Q E P + V GGT ++ +Q R
Sbjct: 267 PSDRDQRRPPIFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQA 326
Query: 200 YGVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK 256
++V TPGR+ D + A L V+ +VLDEAD +L +GF++D+EKI+ +P +
Sbjct: 327 NPCQILVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKDIEKIIAAIPKQ 386
Query: 257 RQTLMFSATMPYEIKQLTRKYLNNPVT-IDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTLMFSAT+P E++Q+ L I+ V + + + +V +L
Sbjct: 387 RQTLMFSATIPDEVRQVCHVALKRDFEYINTVQEGSEDTHSQVRQMHLVAPLDKHFPLLY 446
Query: 316 PLITEHAKGG---KCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFRE 371
++ EH K +VF T ++ + + +L +H Q+ R R FR+
Sbjct: 447 AILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRK 506
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
+LV +DV++RG+D P+V LV+ LP + + ++HR GRTGR GK+G IL+
Sbjct: 507 SKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILL 561
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 194/362 (53%), Gaps = 8/362 (2%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
+ + ++++ + G P+Q + A+ G++M+ A TG+GK+ +F IPI
Sbjct: 139 MSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIPII 198
Query: 139 DKIIKFNAKH-GRGRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVYGGTPISQQM 195
+ + + PLA+ L PTREL+ QVE+ + T V GG +++Q+
Sbjct: 199 SRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQL 258
Query: 196 RQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPP 255
++ GV+++VGTPGR++DLL + ++L +V V+DE D MLQ GF++ V +I L
Sbjct: 259 YRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCMLQRGFRDQVLQIFTALS- 317
Query: 256 KRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
+ Q LM+SAT ++++ + V I VG+ ++ L V KQ +
Sbjct: 318 QPQVLMYSATTSDSLEKMANSMAKDTVVI-TVGEPNRPNKAVKQLAIWVESKQKKQKLFD 376
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKS--LKCEALHGDISQAQRERTLAGFREGH 373
L ++ +++ ++ AD L+++++ S +K ++HG+ S +R + F G
Sbjct: 377 ILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGE 436
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
F V+VAT V RG+D+ V VI +D+PN+ +VH+ GR R G++G AI V D+++
Sbjct: 437 FPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAI-VFVNDENK 495
Query: 434 AI 435
+
Sbjct: 496 NV 497
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 198/400 (49%), Gaps = 34/400 (8%)
Query: 70 EEGSKNDEGLE---IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTG 126
E G K G+ + + E++ A+ G +Q + A+ G D++ +A++G
Sbjct: 34 ESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSG 93
Query: 127 TGKTLAFGIPIKDKIIKFNAKHGRGRDPL-----ALALAPTRELAKQVEKEFYDSA---P 178
GKT F + +I DP+ AL L TRELA Q+ EF +
Sbjct: 94 MGKTAVFVLSTLQQI-----------DPVPGQVSALILCHTRELAYQICHEFERFSTYLA 142
Query: 179 NLDTICVYGGTPISQQMRQLDYGV-DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQM 237
+L YGG I L +VVGTPGRI+ L L+LK V+ +LDE D+M
Sbjct: 143 DLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
Query: 238 LQ-IGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLAD 296
L+ + ++DV+ I P +Q +MFSAT+ EI+ + +K++ +P+ I V D +
Sbjct: 203 LESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLH 261
Query: 297 GISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCE----A 352
G+ + I K L L+ + + ++F ++ A L + ++C
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELDKLL---VECNFPSIC 317
Query: 353 LHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSG 412
+H +SQ +R + GF+EGH +LVATD+ RG+DI V++VI+YD+P++++ ++HR G
Sbjct: 318 IHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
Query: 413 RTGRAGKKGTAI-LVHTEDQSRAIRTIERDVGSKFKELPK 451
R GR G KG AI V + ++ K+LP+
Sbjct: 378 RAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPE 417
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 189/357 (52%), Gaps = 31/357 (8%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK-- 143
IS++ L K +S + IQRA L A+ GRD++G A+TG+GKTLAF IP+ +K+ +
Sbjct: 83 ISKKTQDELHSKFVS-MTKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLHRER 141
Query: 144 FNAKHGRGRDPLALALAPTRELAKQV--------EKEFYDSAPNLDTICVYGGTPISQQM 195
+ + G G ++ ++PTRELA Q+ E + + + + GG ++ +
Sbjct: 142 WGTEDGVG----SIIISPTRELAGQIFGVLNAIGEHHRFSAG-----LLIGGGGDVAIE- 191
Query: 196 RQLDYGVDVVVGTPGRIIDLLNRGA-LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP 254
++ +++++ TPGR++ ++ + ++Q +VLDEAD++L GF+++V I+ +LP
Sbjct: 192 KECVNKLNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAIISQLP 251
Query: 255 PKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGIL 314
+RQT++FSAT ++ L R L +P I + +S + ++ K +L
Sbjct: 252 KRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPTLLKQTVMIVPLDQKLDML 311
Query: 315 APLITEHAKGGKCIVFTQTKRDADRLSHSMSK-----SLKCEALHGDISQAQRERTLAGF 369
I H + K +VF + + + K LKC LHG + Q +R + F
Sbjct: 312 WTFIKRHLQ-SKTLVFLSSCKQVKFVFEVFKKLHPGIPLKC--LHGRMKQEKRMAIYSEF 368
Query: 370 REGHFNVLVATDVASRGLDIPN-VDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
E +VL +TDVA+RGLD VD V+ D P N ++HR GRT R G ++L
Sbjct: 369 CEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSVL 425
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 201/395 (50%), Gaps = 39/395 (9%)
Query: 63 AVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGR 122
VA F SKN IKK IS++ L K +S + IQRA L A+ GRD++G
Sbjct: 65 GVARFEQLPISKN-----IKKALISKKTQDELRSKFVS-MTDIQRASLPHALCGRDVLGA 118
Query: 123 ARTGTGKTLAFGIPIKDKIIK--FNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNL 180
A+TG+GKTLAF IP+ +K+ + + + G G ++ ++PT ELA Q+ L
Sbjct: 119 AKTGSGKTLAFIIPVLEKLYRKRWGPEDGVG----SIIISPTWELAGQI-------FAVL 167
Query: 181 DTI-CVYG--------GTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGA-LNLKEVQFMV 230
I C++G G ++ ++V++ TPGR++ ++ + ++Q +V
Sbjct: 168 KAIGCIHGFSAGLLIGGRQGVATEKECVNKLNVLICTPGRLLQHMDETPNFDCSKMQVLV 227
Query: 231 LDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDS 290
LDEAD++L GF++++ I+ +LP +RQT++FSAT ++ L R L +P I + +S
Sbjct: 228 LDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEES 287
Query: 291 DQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK---- 346
+ ++ K +L I H K K +VF + + + + K
Sbjct: 288 VTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLK-SKTLVFLSSCKQVKFVFEAFKKLHPG 346
Query: 347 -SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPN-VDLVIHYDLPNNS 404
LKC LHG + Q +R + F E ++L ATDVA+RGLD VD V+ D P N
Sbjct: 347 IPLKC--LHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENV 403
Query: 405 EIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIE 439
++HR GRT R G ++L +++ + +E
Sbjct: 404 ASYIHRVGRTARYKSLGKSVLYLLPSETKMLEKLE 438
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 58/416 (13%)
Query: 83 KLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
+LGI E ++ L K+G + +Q A + ++ RD+I ++ TG+GKTLA+ +PI I
Sbjct: 112 ELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPILSVIG 171
Query: 143 KFNAKHGRGRDPL----------ALALAPTRELAKQVEKEFYD--SAPNLDTIC-VYGGT 189
++ G A+ +AP+REL Q+ +EF N + + GG
Sbjct: 172 PLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGMQIVREFEKILGMENRKVVQQLVGGA 231
Query: 190 PISQQMRQLDYGVD-VVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEK 248
++Q L +VVGTPGRI +L G L Q++VLDE D++L F+ED+ +
Sbjct: 232 NRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRAHGCQYLVLDEVDELLSFNFREDMHR 291
Query: 249 ILDRL-------------PPKRQTLMFSATMPYEIKQLTRKYLNNP--------VTIDLV 287
+L+ + +RQ +M SAT+P+ + + + + ++P V ++ +
Sbjct: 292 LLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKSWGSDPLLVQAKKIVPLETL 351
Query: 288 GDSDQKLAD-------------------GISLYSIVTDSYVKQGILAPLITEHAKGGK-C 327
KL+ + Y V K L I HA K
Sbjct: 352 SPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLRRCI--HALDAKFV 409
Query: 328 IVF-TQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRG 386
IVF TK+ D + ++ +K LHGD+ + R TL F+ G VLV ++++RG
Sbjct: 410 IVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTNELSARG 469
Query: 387 LDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDV 442
LD+ DLV++ DLP +S + HR+GRTGR G+ GT + + E + +R +++ +
Sbjct: 470 LDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLKKQL 525
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 194/418 (46%), Gaps = 56/418 (13%)
Query: 76 DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGI 135
DE ++LG+ +V AL KK I K PIQ + ++G+D++ RA+TG+GKTLA+ +
Sbjct: 22 DEDRSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLL 81
Query: 136 PIKDKIIKFNAKHGRGR-DPLALALAPTRELAKQVEKEFYDSAPNLDTICV--YGGTPIS 192
P+ K+ F A R + P LAP+REL +Q+ Y +L +C ++
Sbjct: 82 PLLQKL--FTANVDRKKLAPNVFVLAPSRELCQQI----YVEVKSLLELCKVPLKAVQLN 135
Query: 193 QQMRQLDYGV------DVVVGTPGRIIDLLNRGALNLKEV----QFMVLDEADQMLQIGF 242
M D DV++ TP I L+ L + + +VLDEAD +L G+
Sbjct: 136 SNMLATDLQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGY 195
Query: 243 QEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDL--VGD-SDQKLADGIS 299
+ D++ + +P Q L+ SAT ++ +L + L+NPV + L VG+ D+ + +
Sbjct: 196 ENDIKALTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQ 255
Query: 300 LYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDIS 358
+ I + K + ++ K ++FT + RL + K +K L+ ++
Sbjct: 256 QFWIYCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELP 315
Query: 359 QAQRERTLAGFREGHFNVLVATDVAS---------------------------------R 385
Q R L F G F+ L+ATD++ R
Sbjct: 316 QNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVR 375
Query: 386 GLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVG 443
G+D NV VI++++P + +VHR GRTGRA GT+I + + D+ + VG
Sbjct: 376 GIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEMDTFEEVRSFVG 433
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 192/365 (52%), Gaps = 13/365 (3%)
Query: 90 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG 149
++ LA+ G + PIQR + +Q R+ A TG+GKTLAF P+ ++K A H
Sbjct: 144 LLWKLAELGFREPTPIQRQAIPVLLQDRECFACAPTGSGKTLAFVCPM---LMKLKA-HA 199
Query: 150 RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTP 209
+G A+ + +REL+ Q +E A + + + D+++ TP
Sbjct: 200 KG-GVRAVIICHSRELSGQTYRECKKLAKGEKFRIKLMTKNLLRNADFSKFSCDILISTP 258
Query: 210 GRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLP-PKRQTLMFSATMPY 268
R+ + + ++L V+++VLDE+D++ + + ++ I+ P +FSAT+P
Sbjct: 259 LRLCLAIKKKKVDLSRVEYLVLDESDKLFEPQLFKQIDSIIKACTNPSIIRSLFSATLPD 318
Query: 269 EIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK--GGK 326
++ R+ +++ V + +VG + +D I + T S ++G L + A+
Sbjct: 319 FVEDRARELMHDAVRV-IVGRKNMA-SDTIKQKLVFTGS--EEGKLLAIRQSFAESLNPP 374
Query: 327 CIVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASR 385
+VF Q+K A L ++ +++ + +H D+SQ +RE + FR G VL+ATDV +R
Sbjct: 375 VLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVAR 434
Query: 386 GLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSK 445
G+D ++ VI+YD P+++ ++HR GR+GRAG+ G AI +TE+ +R + + S
Sbjct: 435 GMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEEDIPFLRNVSNLMASS 494
Query: 446 FKELP 450
E+P
Sbjct: 495 GCEVP 499
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 193/378 (51%), Gaps = 28/378 (7%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIK 143
LG+ +E++ A+ + GI IQ + + G+ ++ + TG+GKTLA+ +P+ + +
Sbjct: 114 LGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRR 173
Query: 144 FNAKHG---RGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQL 198
+G + + P A+ L PTREL++QV + + + C V GG + Q L
Sbjct: 174 DEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESL 233
Query: 199 DYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR- 257
+D+VVGTPGRI+ + G + ++Q++VLDEAD M GF D++K L L +
Sbjct: 234 SNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRAS 293
Query: 258 -------QTLMFSATMPYEIKQLTRKYLNNPV---TIDLVGDSDQKLADGISLYSIVT-- 305
QT++ +ATM ++ L + V T L D I L
Sbjct: 294 KPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKL 353
Query: 306 DSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRER 364
DS ++ +L P + AKG + +VF T + + H + ++ + HG++ AQR
Sbjct: 354 DSLLQ--VLEPSL---AKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVE 408
Query: 365 TLAGFREGHFN--VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
L F+ + + LV TD+A+RGLD+ +VD VI +D P NS ++HR+GRT R G KG
Sbjct: 409 NLNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 467
Query: 423 AI-LVHTEDQSRAIRTIE 439
LV +D S A + E
Sbjct: 468 ITSLVTKKDYSLATKIEE 485
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 147/291 (50%), Gaps = 13/291 (4%)
Query: 93 ALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGR 152
+ +KG + PIQ + A+ G D++ RA+ GTGKT AF IP +KI + N
Sbjct: 2 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQ--- 58
Query: 153 DPLALALAPTRELAKQVEKEFYDSAPNLD--TICVYGGTPISQQMRQLDYGVDVVVGTPG 210
+ L PTRELA Q + + +L + GGT + + +L V ++VGTPG
Sbjct: 59 ---VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPG 115
Query: 211 RIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEI 270
RI+DL +G LK+ +V+DEAD++L FQ +E+++ LPP RQ LMFSAT P +
Sbjct: 116 RILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTV 175
Query: 271 KQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVF 330
K +YL P I+L+ D+ GI+ + + K L L ++ + + I+F
Sbjct: 176 KDFNDRYLRKPYIINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSK-LQINQSIIF 231
Query: 331 TQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNVLVAT 380
+ + L+ +++ C +H + Q R R FR G LV T
Sbjct: 232 CNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 188/399 (47%), Gaps = 50/399 (12%)
Query: 92 SALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRG 151
S+ +G + IQ+ V+ P +G +I + GTG F I I K+ + H +
Sbjct: 3 SSTHSQGFGRPSSIQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKL-DYGLVHCQ- 60
Query: 152 RDPLALALAPTRELAKQVEKEFYDSA--PNLDTICVYGGTPISQQMRQ------------ 197
AL LAPT EL Q+++ D + GGT + ++ RQ
Sbjct: 61 ----ALVLAPTMELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIV 116
Query: 198 -----------------LDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQI 240
GV ++VGTP + D+L RG L ++ V+DE DQML +
Sbjct: 117 EGTSNVYDIIDMDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSL 176
Query: 241 GFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGI-S 299
GF++ +++I LP K Q + SATMP E ++TRK++ PVTI D+ +GI
Sbjct: 177 GFKDKIDEIFKLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQ--AKPDELTLEGIKQ 234
Query: 300 LYSIVTDSYVKQGILAPL--ITEHAKG-GKCIVFTQTKRDADRLSHSM-SKSLKCEALHG 355
Y V K L + +T AK CIVF T+ D L+ M S+ K +
Sbjct: 235 FYVDVEKEEWKLETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQS 294
Query: 356 DISQAQRERTLAGF--REGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGR 413
D+ Q R+ + F + G +VL+ TD G D+ V L+++YDLP E +++R GR
Sbjct: 295 DMDQNTRDIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGR 354
Query: 414 TGRAGKKGTAILVH--TEDQSRAIRTIERDVGSKFKELP 450
R+G+ G + ++ T+D++ I I++ +ELP
Sbjct: 355 --RSGQFGRCVAINFMTKDEATMIIDIQKFYNMVIEELP 391
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 161/351 (45%), Gaps = 28/351 (7%)
Query: 109 VLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQ 168
V+ P +G D+I + +GTG + F I I K++ + H + AL LAPT ELA Q
Sbjct: 2 VIPPFCKGHDVILQDPSGTGMSATFCIGIL-KMLDYELAHCQ-----ALVLAPTNELALQ 55
Query: 169 VEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQF 228
+++ D + G I + G+ V R + +
Sbjct: 56 IKQVMQDLGQ-------FHGVRIHACVG----GISAPVEDLQRFMQVFTL---------L 95
Query: 229 MVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVG 288
+V+DE D+ML F+E ++KI LP K Q + S+TMP E ++TRK++ PVTI
Sbjct: 96 VVMDEVDEMLSCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVTIQAKR 155
Query: 289 DSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSM-SKS 347
D L Y V + K L + T CIVF T+R D L M S+
Sbjct: 156 DELTTLEGIKQFYVNVDEEKWKLETLYDIYTTKFIT-HCIVFVNTERKVDWLMDKMRSRY 214
Query: 348 LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF 407
+H D+ Q R+ + F+ G +L+ TD GLD+ V LVI+YDLP E +
Sbjct: 215 YTVLTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENY 274
Query: 408 VHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAVDRAS 458
+HR GR G+KG AI T D R + I++ +ELP D S
Sbjct: 275 LHRICHKGRFGRKGVAINFVTLDDFRMLSDIQKLSNVIIEELPSNFADLLS 325
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 172/326 (52%), Gaps = 19/326 (5%)
Query: 91 VSALAKKGI-----SKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
VS L+ KG+ K+ +Q A L ++G+D++ +A+TGTGKT+AF +P + ++K
Sbjct: 112 VSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP 171
Query: 146 -AKHGRGRDP-LALALAPTRELAKQVEKE---FYDSAPNLDTICVYGGTPI-SQQMRQLD 199
+ G+ + P L L + PTRELA+Q E P + V GGT I S+Q R
Sbjct: 172 PSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQK 231
Query: 200 YGVDVVVGTPGRIIDLLNRGA---LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPK 256
++V TPGR+ D + + A NL ++ V+DEAD++L +GF++D+E+I+ +P +
Sbjct: 232 NPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEIITSVPKQ 291
Query: 257 RQTLMFSATMPYEIKQLTRKYLNNPVT-IDLVGDSDQKLADGISLYSIVTDSYVKQGILA 315
RQTLMFSAT+P + Q+ L I+ V + ++ + ++ +L+
Sbjct: 292 RQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAPLDKHFSLLS 351
Query: 316 PLITEHAKGG---KCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFRE 371
++ EH K +VF T ++ + K L ++ Q R R FR+
Sbjct: 352 VILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFRK 411
Query: 372 GHFNVLVATDVASRGLDIPNVDLVIH 397
+LV +DV++RG+D P+V LV+
Sbjct: 412 SKRLILVTSDVSARGVDYPDVSLVVQ 437
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 204/450 (45%), Gaps = 85/450 (18%)
Query: 84 LGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
LG+ + + L ++ G IQ + + GR + A TGTGKT+A+ PI +
Sbjct: 48 LGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQ 107
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEK-------EFYDSAPNLDTICVYGGTPISQQM 195
++ + R AL L PTREL QV + F+ P + GG S++
Sbjct: 108 SYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGY----IMGGESRSKEK 163
Query: 196 RQLDYGVDVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL- 253
+L G+ +++ TPGR++D L N + +++++ DEAD++L++GF +++++IL+ L
Sbjct: 164 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLG 223
Query: 254 ---------------PPK--RQTLMFSATMPYEIKQLTRKYLNNPVTIDL---------- 286
P K RQ L+ SAT+ ++ L + L +PV I +
Sbjct: 224 SMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSR 283
Query: 287 ----VGDSDQKLAD-------GISLYSI---VTDSYVKQGI---LAPLIT------EHAK 323
D D+ D I Y + + Y+K LA L++ E
Sbjct: 284 IRFDNSDCDEDNEDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREP 343
Query: 324 GGKCIVFTQTKRDADRLSHSM-----------------SKSLKCEA--LHGDISQAQRER 364
K ++F T DA +S+ + L C+ LHG++ Q R
Sbjct: 344 SQKVVLFFSTC-DAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTT 402
Query: 365 TLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
+ F+ +L++TDV++RGLD PNV +I YD P + +VHR GRT R G++G ++
Sbjct: 403 SFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESL 462
Query: 425 LVHTEDQSRAIRTIERDVGSKFKELPKIAV 454
L + ++ +E+ G E P + V
Sbjct: 463 LFLQPSEIDYLQDLEKH-GVSLVEYPLLKV 491
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 198/423 (46%), Gaps = 88/423 (20%)
Query: 92 SALAKKGISKLFPIQRAVLE----PAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAK 147
SAL GIS LFP+Q AV P RD+ + TG+GKTLA+ +P+ + K
Sbjct: 41 SALEDMGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGRVTK 100
Query: 148 HGRGRDPLALALAPTRELAKQVEKEFYDSAPN---LDTICVYGGTPISQQMRQL------ 198
R AL + PTR+LA QV K+ +D+ + L G + ++ ++ +L
Sbjct: 101 CLR-----ALVVVPTRDLALQV-KQVFDAVASPLGLRVGLAVGQSSLADEISELVEMPAR 154
Query: 199 DYG----------------VDVVVGTPGRIIDLLNRG-ALNLKEVQFMVLDEADQMLQIG 241
D G VD++V TPGR++D +N L+ + ++V+DE D++L+
Sbjct: 155 DIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYYLVVDETDRLLREA 214
Query: 242 FQEDVEKIL--------------------------------------DRLPPKRQTLMFS 263
+Q + +L D+ P+ ++ S
Sbjct: 215 YQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKDKPYPRLAKMVLS 274
Query: 264 ATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAK 323
AT+ + +L + L++P+ + G +L + + Y ++ + VK L L+ +
Sbjct: 275 ATLTQDPGRLIQLNLHHPLLLK-AGQMRYRLPENLESYKLICEKKVKPLYLIALLKSLGE 333
Query: 324 GGKCIVFTQTKRDADRLSHSMSKSLKC-EALHGDIS-------QAQRERTLAGFREGHFN 375
KC+VFT++ +H + + L C E L DI Q R +TL FR+G F
Sbjct: 334 E-KCLVFTKSVDS----THRLCQLLNCFEDLRIDIKEYSSLQHQRVRSKTLNEFRKGVFQ 388
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAI 435
VL+++D +RG+D+ V VI+YD+P + VHR+GRT RAG+ G + +ED+ R
Sbjct: 389 VLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRCFTLMSEDEVRRF 448
Query: 436 RTI 438
+ +
Sbjct: 449 KKL 451
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 50/378 (13%)
Query: 117 RDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQ-------- 168
RD+I +A G+GKT F + + ++ + P AL + PTRELA Q
Sbjct: 120 RDLIAQAHNGSGKTTCFNLGMLSRV------DPNLQAPQALCICPTRELAIQNIEVLRKM 173
Query: 169 -----VEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNL 223
+ E D+I V PI Q VV+GTPG + +L+ L +
Sbjct: 174 GKYTGISSECAVPMDRRDSIPVMKRAPIMAQ---------VVIGTPGTMKNLITYKKLGV 224
Query: 224 KEVQFMVLDEADQML-QIGFQEDVEKIL---DRLPPKRQTLMFSATMPYEIKQLTRKYLN 279
+++ +V DEADQML + GF++D +I+ ++ Q L+FSAT +K + +
Sbjct: 225 TKLKILVFDEADQMLAEDGFRDDSLRIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVG 284
Query: 280 NPVTIDLVGDSDQKLADGISLYSI-VTDSYVKQGILAPLITEHAKG-GKCIVFTQTKRDA 337
+L ++ D + Y + V D VK ++ I E + G+ I+F +T+ A
Sbjct: 285 KKEHNELFVKKEELSLDAVKQYKVLVPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSA 344
Query: 338 DRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVI 396
L ++ + ++ G + R++ + F++G VL++TDV +RG D V+LVI
Sbjct: 345 KMLHKALVDLGYEVTSIQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVI 404
Query: 397 HYDLP--------------NNSEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTIERD 441
+YDLP + E+++HR GR GR G+KG L+ E + + IE+
Sbjct: 405 NYDLPLKYAAEYTHGHEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKH 464
Query: 442 VGSKFKELPKIAVDRASV 459
G+ KE+ +V+ V
Sbjct: 465 FGTYIKEVKDRSVEDYKV 482
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 75 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD-MIGRARTGTGKTLAF 133
++E LG+S ++V A K IQ V+ A+QG+D +IG + +GK AF
Sbjct: 2 SEEMKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAF 61
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI +++ A L+P+R+L ++ + F C + I
Sbjct: 62 VLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDI 118
Query: 192 SQQMRQLDYGVDVVVGTPGRIIDLLN-RGALNLKEVQFMVLDEADQMLQIGFQED-VEKI 249
Q Q+ ++VGT ++ L +L ++++V+ EAD +L F+E + I
Sbjct: 119 IDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDI 178
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ---KLADGISLYSIVTD 306
L +P +R+T +FS+TM ++ + R L NP+ ID+ +L + +++ D
Sbjct: 179 LSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKD 238
Query: 307 SYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALH--GDISQAQRER 364
Y L ++TE G K VFTQT A L+ + K+L A+ +SQA++
Sbjct: 239 CY-----LVYILTEMT-GRKSTVFTQTCGSAFLLALIL-KNLDFRAIPIISYMSQAKKLG 291
Query: 365 TLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
L F+ G FN+L+ ++ A RGLDIP VD+VI+Y++P + ++HR G TG AI
Sbjct: 292 ALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHV---NAAI 348
Query: 425 LVHTEDQSRAIRTIERDVGSKFKELP 450
++ + IER G K P
Sbjct: 349 SFVNPYEAGQLEMIERHTGKKLPVYP 374
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 75 NDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD-MIGRARTGTGKTLAF 133
++E LG+S ++V A K IQ V+ A+QG+D +IG + +GK AF
Sbjct: 2 SEEMKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAF 61
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI +++ A L+P+R+L ++ + F C + I
Sbjct: 62 VLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDI 118
Query: 192 SQQMRQLDYGVDVVVGTPGRIIDLLN-RGALNLKEVQFMVLDEADQMLQIGFQED-VEKI 249
Q Q+ ++VGT ++ L +L ++++V+ EAD +L F+E + I
Sbjct: 119 IDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDI 178
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ---KLADGISLYSIVTD 306
L +P +R+T +FS+TM ++ + R L NP+ ID+ +L + +++ D
Sbjct: 179 LSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKD 238
Query: 307 SYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALH--GDISQAQRER 364
Y L ++TE G K VFTQT A L+ + K+L A+ +SQA++
Sbjct: 239 CY-----LVYILTEMT-GRKSTVFTQTCGSAFLLALIL-KNLDFRAIPIISYMSQAKKLG 291
Query: 365 TLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI 424
L F+ G FN+L+ ++ A RGLDIP VD+VI+Y++P + ++HR G TG AI
Sbjct: 292 ALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHV---NAAI 348
Query: 425 LVHTEDQSRAIRTIERDVGSKFKELP 450
++ + IER G K P
Sbjct: 349 SFVNPYEAGQLEMIERHTGKKLPVYP 374
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 23/377 (6%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD-MIGRARTGTGKTLAFGIPIKDKII 142
LG+S ++V A K IQ V+ A+QG+D +IG + +GK AF +PI ++
Sbjct: 7 LGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALL 66
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDY 200
+ A L+P+R+L ++ + F C + I Q Q+
Sbjct: 67 EAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQ 123
Query: 201 GVDVVVGTPGRIIDLLN-RGALNLKEVQFMVLDEADQMLQIGFQED-VEKILDRLPPKRQ 258
++VGT ++ L +L ++++V+ EAD +L F+E + IL +P +R+
Sbjct: 124 QPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERR 183
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ---KLADGISLYSIVTDSYVKQGILA 315
T +FS+TM ++ + R L NP+ ID+ +L + +++ D Y L
Sbjct: 184 TFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCY-----LV 238
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALH--GDISQAQRERTLAGFREGH 373
++TE G K VFTQT A L+ + K+L A+ +SQA++ L F+ G
Sbjct: 239 YILTEMT-GRKSTVFTQTCGSAFLLALIL-KNLDFRAIPIISYMSQAKKLGALNAFKSGK 296
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
FN+L+ ++ A RGLDIP VD+VI+Y++P + ++HR G TG AI ++
Sbjct: 297 FNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHV---NAAISFVNPYEAG 353
Query: 434 AIRTIERDVGSKFKELP 450
+ IER G K P
Sbjct: 354 QLEMIERHTGKKLPVYP 370
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 23/377 (6%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD-MIGRARTGTGKTLAFGIPIKDKII 142
LG+S ++V A K IQ V+ A+QG+D +IG + +GK AF +PI ++
Sbjct: 7 LGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALL 66
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDY 200
+ A L+P+R+L ++ + F C + I Q Q+
Sbjct: 67 EAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQ 123
Query: 201 GVDVVVGTPGRIIDLLN-RGALNLKEVQFMVLDEADQMLQIGFQED-VEKILDRLPPKRQ 258
++VGT ++ L +L ++++V+ EAD +L F+E + IL +P +R+
Sbjct: 124 QPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERR 183
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ---KLADGISLYSIVTDSYVKQGILA 315
T +FS+TM ++ + R L NP+ ID+ +L + +++ D Y L
Sbjct: 184 TFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCY-----LV 238
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALH--GDISQAQRERTLAGFREGH 373
++TE G K VFTQT A L+ + K+L A+ +SQA++ L F+ G
Sbjct: 239 YILTEMT-GRKSTVFTQTCGSAFLLALIL-KNLDFRAIPIISYMSQAKKLGALNAFKSGK 296
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
FN+L+ ++ A RGLDIP VD+VI+Y++P + ++HR G TG AI ++
Sbjct: 297 FNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHV---NAAISFVNPYEAG 353
Query: 434 AIRTIERDVGSKFKELP 450
+ IER G K P
Sbjct: 354 QLEMIERHTGKKLPVYP 370
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 23/377 (6%)
Query: 84 LGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRD-MIGRARTGTGKTLAFGIPIKDKII 142
LG+S ++V A K IQ V+ A+QG+D +IG + +GK AF +PI ++
Sbjct: 7 LGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALL 66
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDY 200
+ A L+P+R+L ++ + F C + I Q Q+
Sbjct: 67 EAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQ 123
Query: 201 GVDVVVGTPGRIIDLLN-RGALNLKEVQFMVLDEADQMLQIGFQED-VEKILDRLPPKRQ 258
++VGT ++ L +L ++++V+ EAD +L F+E + IL +P +R+
Sbjct: 124 QPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERR 183
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQ---KLADGISLYSIVTDSYVKQGILA 315
T +FS+TM ++ + R L NP+ ID+ +L + +++ D Y L
Sbjct: 184 TFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCY-----LV 238
Query: 316 PLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALH--GDISQAQRERTLAGFREGH 373
++TE G K VFTQT A L+ + K+L A+ +SQA++ L F+ G
Sbjct: 239 YILTEMT-GRKSTVFTQTCGSAFLLALIL-KNLDFRAIPIISYMSQAKKLGALNAFKSGK 296
Query: 374 FNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSR 433
FN+L+ ++ A RGLDIP VD+VI+Y++P + ++HR G TG AI ++
Sbjct: 297 FNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHV---NAAISFVNPYEAG 353
Query: 434 AIRTIERDVGSKFKELP 450
+ IER G K P
Sbjct: 354 QLEMIERHTGKKLPVYP 370
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 141/262 (53%), Gaps = 11/262 (4%)
Query: 185 VYGGTPISQQMRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMVLDEADQMLQIGFQ 243
V GG+ + L G+++VV TPGR++D L N ++ +++DEAD++L+ F+
Sbjct: 22 VIGGSARRTEAESLAKGINIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFE 81
Query: 244 EDVEKILDRLPPKRQTLMFSATMPYEIKQLTR-KYLNNPVTIDLVGDSDQKLADGISLYS 302
+++++I+ LP RQT +FSAT +++ L R + P+ ID V D +K+ + L
Sbjct: 82 DELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQTTPIYID-VDDGRKKVTNEGLLQG 140
Query: 303 IVTDSYVKQGILAPLITEHAKGGKCIVF----TQTKRDADRLSHSMSKSLKCEALHGDIS 358
V K+ ++ + K K +VF K AD +H L C +++G
Sbjct: 141 YVVVPCAKRFMVLYSFLKRHKSKKVMVFFSSCNSVKFHADIFNHI---HLHCSSIYGKQK 197
Query: 359 QAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAG 418
Q R T F + +L+ TDVA+RGLDIP+VD ++ YD P+ + ++HR GRT R
Sbjct: 198 QQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGE 257
Query: 419 K-KGTAILVHTEDQSRAIRTIE 439
KG A+L ++ + +R ++
Sbjct: 258 DGKGNALLFLIPEELQFLRYLK 279
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 181/398 (45%), Gaps = 51/398 (12%)
Query: 81 IKKLGISEEIVSAL-AKKGISKLFPIQRAVLEPAMQ--GRDMIGRARTGTGKTLAFGIPI 137
++L +S E++ L + G K IQ L + +D+I +AR G+GKT F + +
Sbjct: 56 FEELSLSPELLKGLYVEMGFIKPSKIQEITLPMILNPPHKDLIAQARNGSGKTTCFVLGM 115
Query: 138 KDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYD-----------SAPNLDTICVY 186
++ + P AL + PTRELA Q + + P++D I
Sbjct: 116 LSRV------DPNMKAPQALCICPTRELAIQNNEVLQKMGKYTGISSELAIPSMDKIPPS 169
Query: 187 GGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQML-QIGFQED 245
PI Q VV+GTPG I L N L + ++ +V DEADQML Q+ +D
Sbjct: 170 RRPPIMAQ---------VVIGTPGTINSLKNHKKLGVTRLKILVFDEADQMLAQMMVTKD 220
Query: 246 VEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSI-V 304
L Q L+FSAT +K + + + ++ + + Y +
Sbjct: 221 WLVFL-------QVLLFSATFDDTVKNFATRIVAKKEHNEYFVKKEELSLEAVKQYKVKC 273
Query: 305 TDSYVKQGILAPLITEHAKG-GKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQR 362
TD K ++ I E + G+ I+F +T+ A L S+ + ++ G + +R
Sbjct: 274 TDELAKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDFGYEVTSIQGALQTEER 333
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLP----------NNSEIFVHRSG 412
+ + F++G VL++TDV SRG D V+LVI+YDLP + E+++HR G
Sbjct: 334 DTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRVG 393
Query: 413 RTGRAGKKGTAI-LVHTEDQSRAIRTIERDVGSKFKEL 449
R GR G+KG L+ E + + IE G +E+
Sbjct: 394 RAGRFGRKGAVFNLICHESEQMVMSKIEEHFGIHVEEV 431
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 154/305 (50%), Gaps = 25/305 (8%)
Query: 154 PLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPISQQMRQLDYGVDVVVGTPGR 211
P A+ L PTREL++QV + + + C V GG + Q L +D+VVGTPGR
Sbjct: 11 PRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESLSNPIDMVVGTPGR 70
Query: 212 IIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR--------QTLMFS 263
I+ + G + ++Q++VLDEAD M GF D++K L L + QT++ +
Sbjct: 71 ILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRASKPDSLGFQTVLVT 130
Query: 264 ATMPYEIKQLTRKYLNNPV---TIDLVGDSDQKLADGISLYSIVT--DSYVKQGILAPLI 318
ATM ++ L + V T L D I L DS ++ +L P +
Sbjct: 131 ATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQ--VLEPSL 188
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFN-- 375
AKG + +VF T + + H + ++ + HG++ AQR L F+ + +
Sbjct: 189 ---AKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDDCP 245
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT-AILVHTEDQSRA 434
LV TD+A+RGLD+ +VD VI +D P NS ++HR+GRT R G KG LV +D S A
Sbjct: 246 TLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVTKKDYSLA 304
Query: 435 IRTIE 439
+ E
Sbjct: 305 TKIEE 309
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 17/215 (7%)
Query: 71 EGSKNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKT 130
+ + ND+ + LG+SE +V K G+ P+QR + ++GR +IG +TG+GKT
Sbjct: 241 DNAGNDKHMSFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKT 300
Query: 131 LAFGIPIKDKIIKFNAKHGRGRDPL---ALALAPTRELAKQVEKEFYDSAPNLDTI--CV 185
AF +PI ++ G P AL L PTRELA Q+ +F+ +L I V
Sbjct: 301 AAFALPILQRL---------GETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLILTVV 351
Query: 186 YGGTPISQQMRQLDYGVDVVVGTPGRIIDLLNRG---ALNLKEVQFMVLDEADQMLQIGF 242
GG Q +QL ++V+ TP R+ LL A +F+VLDEADQ+L +GF
Sbjct: 352 VGGLDKRIQAKQLVARPNLVIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLDVGF 411
Query: 243 QEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKY 277
QE+++ I LP RQ L FSATM ++++ Y
Sbjct: 412 QEELKVIFQCLPENRQNLFFSATMTSNLQKMCDCY 446
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 79 LEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIK 138
+ LG+SE V K G+ +Q+ + ++GRD++G TG+GKT AF +PI
Sbjct: 1 MSFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPIL 60
Query: 139 DKIIKFNAKHGR--GRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMR 196
++ A+H + G AL L PTRELA Q+ +F +L P S +
Sbjct: 61 QRL----AEHPKPFGVYVFALVLTPTRELAIQLADQFLALGSSL--------LPTSPHL- 107
Query: 197 QLDYGVDVVVGTPGRIIDLLNRG---ALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
V+ TP R+ LL A +F+VLDEADQ+L +GF++++ I+ L
Sbjct: 108 --------VIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVGFRDELNVIVQCL 159
Query: 254 PPKRQTLMFSATMPYEIKQLTR-KYLNN 280
P RQ L FS TM +K++ +Y +N
Sbjct: 160 PENRQNLFFSETMTSNLKKMMYDRYRDN 187
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 180/398 (45%), Gaps = 45/398 (11%)
Query: 81 IKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDK 140
K +G ++ ++ +L +++ IQ P + G+ I ++G+GKTLA+ +PI +
Sbjct: 133 FKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVPIIQR 192
Query: 141 IIK--FNAKH-GRGRDPLALALAPTRELAKQVEKEFYDSAPN----LDTICVYGGTPISQ 193
+ + H + P L LAPT ELA QV + + ++ V GG
Sbjct: 193 LRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSMLVTGGFRQKT 252
Query: 194 QMRQLDYGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL 253
Q+ L+ GVDV++ TPGR + L+N+G L+L + VLDE D + ED EK L L
Sbjct: 253 QLDTLNQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFG---DEDFEKALQCL 309
Query: 254 ----PPKRQTLMFSATMPYEI-KQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSY 308
P Q L +AT+P + +L + P ++G S ++ L I+ D
Sbjct: 310 ISSSPVDTQYLFVTATLPKNVYSKLVEVF---PDCEMVMGPSMHRINS--RLEEIIVDCS 364
Query: 309 VKQGILAPL-------------ITEHAKGGKCIVFTQTKRDADRLSHSMS----KSLKCE 351
+ G L + E + + IVF ++ ++++ K ++ +
Sbjct: 365 GEDGQEKTLDTAFLNKKAALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQ 424
Query: 352 AL--HGDISQAQRERTLAGFREGH----FNVLVATDVASRGLDIPNVDLVIHYDLPNNSE 405
L H ++Q R ++ F +V TD ASRG+D VD VI +D P +
Sbjct: 425 VLPFHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPS 484
Query: 406 IFVHRSGRTGRA--GKKGTAILVHTEDQSRAIRTIERD 441
+V R GRT R G+ I V + S A + +ER+
Sbjct: 485 EYVRRVGRTARGARGQGKAFIFVVGKQVSLARKVMERN 522
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 73/341 (21%)
Query: 185 VYGGTPISQQMRQLDYGVDVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQ 243
+ GG S++ +L G+ +++ TPGR++D L N + +++++ DEAD++L++GF
Sbjct: 32 IMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFG 91
Query: 244 EDVEKILDRL----------------PPK--RQTLMFSATMPYEIKQLTRKYLNNPVTI- 284
+++++IL+ L P K RQ L+ SAT+ ++ L + L +PV I
Sbjct: 92 KEIQEILNLLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIG 151
Query: 285 --DLVGDSDQKL--------ADGISLYSI---------VTDSYVKQGILAPL-------- 317
D V + K+ D YS V + +++ + P
Sbjct: 152 IDDKVLEPTSKIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILL 211
Query: 318 -----ITEHAKGGKCIVFTQTKRDADRLSHSMSKS-----------------LKCEAL-- 353
+ E K ++F T DA +S+ L C+ L
Sbjct: 212 SILKHLFEREPSQKIVLFFSTC-DAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRL 270
Query: 354 HGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGR 413
HG++ Q R + F+ +L++TDV++RGLD PNV +I YD P + +VHR GR
Sbjct: 271 HGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGR 330
Query: 414 TGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAV 454
T R G++G ++L + ++ +E+ G E P + V
Sbjct: 331 TARLGERGESLLFLQPSEIEYLQDLEKH-GVSLAEYPLLKV 370
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 9/211 (4%)
Query: 221 LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNN 280
+ ++Q +VLDEAD++L GF+++V I+ +LP +RQT++FSAT ++ L R L +
Sbjct: 7 FDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKD 66
Query: 281 PVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRL 340
P I + +S + ++ K +L I H + K +VF + + +
Sbjct: 67 PEYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQ-SKTLVFLSSCKQVKFV 125
Query: 341 SHSMSK-----SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPN-VDL 394
K LKC LHG + Q +R + F E +VL +TDVA+RGLD VD
Sbjct: 126 FEVFKKLHPGIPLKC--LHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDW 183
Query: 395 VIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
V+ D P N ++HR GRT R G ++L
Sbjct: 184 VVQVDCPENVASYIHRVGRTARYNSVGKSVL 214
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 10/225 (4%)
Query: 221 LNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKRQTLMFSATMPYEIKQLTRKYLNN 280
+ ++Q +VLDEAD++L GF++++ I+ +LP +RQT++FSAT ++ L R L +
Sbjct: 7 FDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKD 66
Query: 281 PVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRL 340
P I + +S + ++ K +L I H K K +VF + + +
Sbjct: 67 PEYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLK-SKTLVFLSSCKQVKFV 125
Query: 341 SHSMSK-----SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPN-VDL 394
+ K LKC LHG + Q +R + F E ++L ATDVA+RGLD VD
Sbjct: 126 FEAFKKLHPGIPLKC--LHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDW 182
Query: 395 VIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIE 439
V+ D P N ++HR GRT R G ++L +++ + +E
Sbjct: 183 VVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPSETKMLEKLE 227
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI------- 108
Query: 149 GRGRDPL-----ALALAPTRELAKQVEKEF---YDSAPNLDTICVYGGTPISQQMRQL-D 199
DP+ AL L TRELA Q+ EF P+L YGG I L +
Sbjct: 109 ----DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 200 YGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQ 258
+VVGTPGRI+ L L+LK V+ VLDE D+ML+ + ++DV+ I P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVT 283
+MFSAT+ EI+ + +K++ + ++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDVIS 249
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 89 EIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKH 148
E++ A+ G +Q + A+ G D+I +A++G GKT F + +I
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI------- 108
Query: 149 GRGRDPL-----ALALAPTRELAKQVEKEF---YDSAPNLDTICVYGGTPISQQMRQL-D 199
DP+ AL L TRELA Q+ EF P+L YGG I L +
Sbjct: 109 ----DPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 200 YGVDVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQ-IGFQEDVEKILDRLPPKRQ 258
+VVGTPGRI+ L L+LK V+ VLDE D+ML+ + ++DV+ I P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVT 283
+MFSAT+ EI+ + +K++ + ++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDVIS 249
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 90 IVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHG 149
I L K +++ IQ + ++G D+ + G+GKTLA+ IP D + K K+
Sbjct: 28 ISRTLVKFQAARMTSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLCK--NKYE 85
Query: 150 RGRDPLALALAPTRELAKQVEKE----FYDSAPNLDTICVYGGTPISQQMRQLDYGVDVV 205
+ + L P +A Q++++ DS L TI +P + +R+ +++
Sbjct: 86 PDDGIIVMVLCPNTMVAIQIDRDIKTILKDSPQTLQTIGRLIASPGDRYVRK-----NLL 140
Query: 206 VGTPG--RIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRLPPKR-QTLMF 262
+ TP R + + +++F++ D+ +L+ Q+ + P ++ Q +F
Sbjct: 141 IATPAGLRYHHAYDPERIKYDKLKFLIFDDPYLILRFSDQKKWNWVRSNFPKEQLQIAIF 200
Query: 263 SATMPYEIKQLTRKYLNNPVTIDLVGDS----DQKLADGISLYSIVTDSYVKQG-ILAP- 316
S T +L R+ L + L+ + D + D + VT+ ++Q IL P
Sbjct: 201 SVT------KLKRECL-----LRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFILVPC 249
Query: 317 ---LITEH-----AKGGKCIVFTQTKRDADRLSHSMSKSL--KCEALHGDISQAQRERTL 366
LIT + K K +VF T + + L KC +HGD + ++ +
Sbjct: 250 AKRLITLYIMLKTTKSKKVMVFFSTTESV-KFHEELFTFLDVKCYGVHGDQTVSEHSKIY 308
Query: 367 AGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILV 426
F +L+ T++A+ GL+IP+VDL++ YD P + E ++H+ GRT R +KG A+L
Sbjct: 309 YSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARGTRKGNALLF 368
Query: 427 HTEDQSRAI 435
+ R I
Sbjct: 369 LMPHELRFI 377
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 72/368 (19%)
Query: 84 LGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
LG+S ++V K+ IQ V+ A++G+D+ + +GKT AF +PI + +
Sbjct: 7 LGLSLQLVEVCEKQLDWYDPLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLPIF-QAL 65
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGV 202
F + R + L V+ S +++ Y I QQ
Sbjct: 66 NFAFEIARYFEALGQHFG--------VKFAVLVSTSDME----YQTNKILQQPH------ 107
Query: 203 DVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQE---DVEKILDRLPPKRQ 258
++V TPG+++ L + A +L++++++VLDEA +L+ ++ +E IL ++P R
Sbjct: 108 -IIVATPGKLVKHLKDTPAFSLRKLKYLVLDEA-HLLESNYKHIDRQLEFILGKIPRNRT 165
Query: 259 TLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLI 318
T +FS + ++ + +L NPV ID + I
Sbjct: 166 TFLFSDSKTDKVDMIQSVFLRNPVKID-------------------------ESI----- 195
Query: 319 TEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLV 378
E+ + +C + + K L C +SQA+R L F+ G+ +L+
Sbjct: 196 -EYPEQQQCHMPAKDK----------VYPLPCPK--NIVSQAKRLEALNAFKSGNCKILL 242
Query: 379 ATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTI 438
D+ASRGLDIP VD VI+YD+P++ ++H G+A G AI + +++R I
Sbjct: 243 CNDLASRGLDIPAVDTVINYDIPDDPRDYMH---HVGQAAPTGVAISFVSPNEARWFEMI 299
Query: 439 ERDVGSKF 446
E +G K
Sbjct: 300 ETHIGKKL 307
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 158/370 (42%), Gaps = 54/370 (14%)
Query: 86 ISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFN 145
+ ++++ + + G P+Q+ L GRD I A+TG+GKTLA+ + I ++
Sbjct: 88 VPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAYLLLI------YS 141
Query: 146 AKHGRGRDPLALALAPTRELAKQVEK--EFYDSAPNLDTICVYGGTPISQQMRQLDYGV- 202
R AL L PTREL QV K + P V G M LD G
Sbjct: 142 IISTRKSSFQALVLVPTRELGMQVTKVARILAAKPT----GVEGEQRSCTIMALLDGGTL 197
Query: 203 ------------DVVVGTPGRIIDLLNRGALNLKEVQFMVLDEADQMLQIGFQ-EDVEKI 249
+VV T + +L R +L ++ +V+DE D + Q + KI
Sbjct: 198 RRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGNLRVLVVDEVDFIFNSSKQVSSLRKI 257
Query: 250 LDRLPP--KRQTLMFSATMPYEIKQLTRKYLNNPV--------TIDLVGDSDQKLADGIS 299
L RQT+ SA++P ++LN V I + + + +S
Sbjct: 258 LTSYSSCNNRQTVFASASIPQH-----NQFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLS 312
Query: 300 LYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEAL----HG 355
IV D K L LI A I ++ + + +S S SL + L HG
Sbjct: 313 HRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHG 372
Query: 356 ---------DISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEI 406
D++ R +L R+G +LVATDVA+RG+D P + + +YDLP +
Sbjct: 373 SLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAID 432
Query: 407 FVHRSGRTGR 416
++HR+GRT R
Sbjct: 433 YLHRAGRTCR 442
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 31/230 (13%)
Query: 84 LGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
LG+ + + L ++ G +Q + + GR + A TGTGKT+A+ PI +
Sbjct: 45 LGLHQTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQ 104
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEK-------EFYDSAPNLDTICVYGGTPISQQM 195
++ + R AL L PTREL QV + F+ P + GG S++
Sbjct: 105 SYDKRIQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGY----IMGGESRSKEK 160
Query: 196 RQLDYGVDVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL- 253
+L G+ +++ TPGR++D L N + +++++ DEAD++L++GF +++++IL+ L
Sbjct: 161 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLG 220
Query: 254 ---------------PPK--RQTLMFSATMPYEIKQLTRKYLNNPVTIDL 286
P K RQ L+ SAT+ ++ L + L +PV I +
Sbjct: 221 SMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGI 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 348 LKCEAL--HGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSE 405
L C+ L HG++ Q R + F+ +L++TDV++RGLD PNV +I YD P +
Sbjct: 381 LGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEAT 440
Query: 406 IFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGSKFKELPKIAV 454
+VHR GRT R G++G ++L + ++ +E+ G E P + V
Sbjct: 441 EYVHRVGRTARLGERGESLLFLQPSEIEYLQDLEKH-GVSLAEYPLLKV 488
>Medtr1g015150.1 | DEAD-box ATP-dependent RNA helicase, putative |
HC | chr1:3735983-3738997 | 20130731
Length = 132
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/87 (59%), Positives = 58/87 (66%), Gaps = 16/87 (18%)
Query: 58 SLAEFAVADFPYEEGSKN--DEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQ 115
S +A FPYEE SK+ DEGL+I KLGIS++IVSAL KK I+KLFPIQR
Sbjct: 31 SALRYAAEAFPYEEPSKSNSDEGLQIAKLGISQDIVSALEKKAITKLFPIQRC------- 83
Query: 116 GRDMIGRARTGTGKTLAFGIPIKDKII 142
RTGTGKTLAFGIPI DKII
Sbjct: 84 -------TRTGTGKTLAFGIPIIDKII 103
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 84 LGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKII 142
LG+ + + L ++ G IQ + + GR + A TGTGKT+A+ PI +
Sbjct: 45 LGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQ 104
Query: 143 KFNAKHGRGRDPLALALAPTRELAKQVEK-------EFYDSAPNLDTICVYGGTPISQQM 195
++ + R AL L PTREL QV + F+ P + GG S++
Sbjct: 105 SYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGY----IMGGESRSKEK 160
Query: 196 RQLDYGVDVVVGTPGRIIDLL-NRGALNLKEVQFMVLDEADQMLQIGFQEDVEKILDRL- 253
+L G+ +++ TPGR++D L N + +++++ DEAD++L++GF +++++IL+ L
Sbjct: 161 ARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLG 220
Query: 254 ---------------PPK--RQTLMFSATMPYEIK 271
P K RQ L+ SAT+ ++K
Sbjct: 221 SMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKLK 255
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 251 DRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISLYSIVTDSYVK 310
D+ P+ ++ SAT+ + +L + L++P+ + G +L + + Y ++ + VK
Sbjct: 78 DKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLK-AGQMRYRLPENLESYKLICEKKVK 136
Query: 311 QGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKC-EALHGDIS-------QAQR 362
L L+ + KC+VFT++ +H + + L C E L DI Q R
Sbjct: 137 PLYLIALLKSLGEE-KCLVFTKSVDS----THRLCQLLNCFEDLRIDIKEYSSLQHQRVR 191
Query: 363 ERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGT 422
+TL FR+G F VL+++D +R +D+ V VI+YD+P + +VHR+GRT RA + G
Sbjct: 192 SKTLNEFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGR 251
Query: 423 AILVHTEDQSRAIRTI 438
+ +ED+ R + +
Sbjct: 252 CFTLMSEDEVRRFKKL 267
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 74 KNDEGLEIKKLGISEEIVSALAKKGISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAF 133
+N E K LG+ E +V A K G IQ + A+QG+D+IG ++TG+GKT AF
Sbjct: 4 ENKEIKSFKDLGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAF 63
Query: 134 GIPIKDKIIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTIC--VYGGTPI 191
+PI ++ +HG A ++PTRELA QV ++F + C + G +
Sbjct: 64 ALPILHALLD-APRHGF----FACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDM 118
Query: 192 SQQMRQLDYGVDVVVGTPGRIID-LLNRGALNLKEVQFMV 230
QQ ++ G D+ VGTPGR++D L N +L ++++V
Sbjct: 119 VQQSIEIAKGPDIFVGTPGRVLDHLKNTKGFSLDRLKYLV 158
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 35/345 (10%)
Query: 98 GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLAL 157
G P QR V+E ++ RD + TG+GK+L + +P ++K K G PL
Sbjct: 13 GFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVP--PLVVK---KTGIVVSPLIS 67
Query: 158 ALAPTRELAKQ--VEKEFYDSAPNLDTICVYGGTPISQQMRQLDYGVDVVVGTPGRIIDL 215
+ KQ ++ E+ SA T+ Q + D++ TP + +
Sbjct: 68 LMQDQVMALKQRGIKAEYLSSAQKDYTV----------QSKAERGQFDILFMTPEKACTI 117
Query: 216 LNRGALNL-KE-VQFMVLDEADQMLQIGFQEDVE-KILDRL-------PPKRQTLMFSAT 265
NL KE + +DEA + + G VE K LD+L P T +
Sbjct: 118 PTSFWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEK 177
Query: 266 MPYEIKQLTRKYLNNPVTIDLVGDSDQ-KLADGISLYSIVTDSYVKQGILAPLITEHAKG 324
+ ++I + +NNP + VG D+ L G+ ++ S++ + ++ + E A G
Sbjct: 178 VRFDITNSLK--MNNPYVV--VGSFDRPNLFYGVKQFN-RGQSFIDE-LVEEVSKEVANG 231
Query: 325 GKCIVFTQTKRDADRLSHSMSK-SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVA 383
I++ T +D +++ S+++ + HG + RE + F ++VAT
Sbjct: 232 CSTIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAF 291
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
G+D PN+ VIHY P N E + SGR GR G L +T
Sbjct: 292 GMGIDKPNIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYT 336
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
+SQA++ R+L F+ G +N+L+ +D S+GLDIP VD+VI+Y++P + +++R G T
Sbjct: 178 MSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYRVGWT-- 235
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
A AI + D+ R IE+ +G K P
Sbjct: 236 AAHVNVAISFVSPDERRHFNMIEKHIGKKLPLYP 269
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 348 LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF 407
L+C H + + +R +TL F + VLV TD A+RG+DIPNV VI D ++ F
Sbjct: 460 LECLRYHKNCTLDERAQTLVDFYDKG-GVLVCTDAAARGVDIPNVSHVIQADFATSAVDF 518
Query: 408 VHRSGRTGRAGKKGTAILVHTEDQSRAIRTIER 440
+HR GRT RAG+ G ++TE + + R
Sbjct: 519 LHRIGRTARAGQIGLVTSMYTESNRELVDAVRR 551
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 40 ARHFHSNPVPLQFRASLPSL-AEFAVADFPYEEGSKNDEGLEIKKLGISEEIVSALAKKG 98
A F S +P Q + P + + + DF + ++ + +G+S + AL+
Sbjct: 50 ATRFFSVTLPRQTHQTQPFVGSAVSSEDFNGRDTFFAEDNVSWSSIGLSHTLSRALSNIA 109
Query: 99 ISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIKDKIIKFNAKHGRGRDPLALA 158
++ +Q + + + G+D++ A TG+GKT ++ +P+ DK+ RG + +L
Sbjct: 110 LNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKL--------RGTEEYSLD 161
Query: 159 LAPTRELAKQVEKEFYDSAPNLD------------------------TICVYGGTPISQQ 194
+ +E++ K PN+ IC G PI +
Sbjct: 162 VVSDKEISPPARKVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICGKQGWPIREP 221
Query: 195 MRQLDYGVDVVVGTPGRIIDLLN----RGALNLKEVQFMVLDEADQMLQIGFQEDVEKIL 250
D++V TP +++ ++ R + V+++V DEAD +L FQ V +++
Sbjct: 222 --------DIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLI 273
Query: 251 DRLPPKRQTLMFSATMPYEI 270
+ L + L S T E+
Sbjct: 274 NLLRYDEKLLSRSKTSVSEL 293
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 347 SLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNN--- 403
S K ++ + +R++ + F++G VL++ DV +RG D V+LVI+YDLP N
Sbjct: 89 SYKVNSILDALEHEERDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTA 148
Query: 404 -----------SEIFVHRSGRTGRAGKKGTAI-LVHTEDQSRAIRTIERDVGSKFKELPK 451
E++ HR GR GR G+KG L+ E + + IE G+ E+ +
Sbjct: 149 EITCGGKPELDCEVYFHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGNHVTEVRQ 208
Query: 452 IAVD 455
V+
Sbjct: 209 KCVE 212
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
+SQA++ +L + G N+L+ +D S+GLDIP VD+VI+Y++P + +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
AI + D+ R IE+ +G K P
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
+SQA++ +L + G N+L+ +D S+GLDIP VD+VI+Y++P + +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
AI + D+ R IE+ +G K P
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
+SQA++ +L + G N+L+ +D S+GLDIP VD+VI+Y++P + +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
AI + D+ R IE+ +G K P
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 357 ISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
+SQA++ +L + G N+L+ +D S+GLDIP VD+VI+Y++P + +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 417 AGKKGTAILVHTEDQSRAIRTIERDVGSKFKELP 450
AI + D+ R IE+ +G K P
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 163/393 (41%), Gaps = 58/393 (14%)
Query: 64 VADFPYEEGSKNDEGLEIKKLGISEEI-VSALAKKGISKLFPIQRAVLEPAMQGRDMIGR 122
+ + Y EGS D+ + ++E+ V+ G P QR V+ M G D+
Sbjct: 371 IIEVNYIEGS-GDKRWSSRDFSWTKELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVL 429
Query: 123 ARTGTGKTLAFGIP-----------------IKDKIIKFNAKHGRGRDPLALALAPTREL 165
TG GK+L + +P I+D+I+ H + A L+ E
Sbjct: 430 MPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIM-----HLLQANIPAAYLSANLEW 484
Query: 166 AKQVE--KEFYDSAPNLDTICVYGGTPIS-QQMRQLDYGVDVVVGTPGRIIDLLNRGALN 222
A+Q E +E N D C Y ++ +++ + D + + GR +LL+R
Sbjct: 485 AEQQEILREL-----NSD-YCKYKLLYVTPEKVARSDVLLRQLESLHGR--ELLSR---- 532
Query: 223 LKEVQFMVLDEADQMLQIG--FQEDVEK--ILDRLPPKRQTLMFSATMPYEIKQLTRKYL 278
+V+DEA + Q G F+ D + +L + P L +AT +K+ + L
Sbjct: 533 ------IVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQAL 586
Query: 279 N--NPVTIDLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKCIVFTQTKRD 336
N V Q YS+V + + I E+ I++ ++ D
Sbjct: 587 GLVNCVVFR------QSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMD 640
Query: 337 ADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLV 395
++++ + + KC HG + QR + + N++ AT G++ P+V V
Sbjct: 641 CEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFV 700
Query: 396 IHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
IH+ LP + E + GR GR G++ + +L ++
Sbjct: 701 IHHSLPKSVEGYHQECGRAGRDGQRSSCVLYYS 733
>Medtr1g102425.1 | GUCT (NUC152) domain protein | HC |
chr1:46259228-46254943 | 20130731
Length = 374
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQRERTLAG 368
++ ++ +I ++ G+ I+FT+TK A +L+ + + AL+GDI QAQRE
Sbjct: 73 LRSQLIPDIIRCYSSEGQTIIFTETKESASQLAELLHGA---RALNGDIQQAQREVWEIH 129
Query: 369 FREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT 428
H VA++ L I +V L+I + P + + +HRSGRTG AG G ++++
Sbjct: 130 DISCHV-------VAAQDLYINDVQLIIQCEPPRDVKANIHRSGRTGSAGNTGVVVMLYD 182
Query: 429 EDQSRAIRTIERDV 442
+S I IE V
Sbjct: 183 PRRSN-IPKIESQV 195
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 364 RTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTA 423
+TL FR+G F VL+++D +R +D+ V VI+YD+P + +VHR+GRT RA + G
Sbjct: 24 KTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRC 83
Query: 424 ILVHTEDQS 432
+ +ED++
Sbjct: 84 FTLMSEDEA 92
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 164/416 (39%), Gaps = 80/416 (19%)
Query: 67 FPYEEGSKNDEGLEIKKLGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRART 125
P E S N + LE L E +V L G +Q ++ + GRD T
Sbjct: 10 LPLIETSGNKKKLE---LCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPT 66
Query: 126 GTGKTLAFGIPI--KDKIIKFNAKHGRGRDPLALALAPTRELA---KQVEKEFYDS---A 177
G GK++ + IP K+ I+ PL +AL + +A K + EF S A
Sbjct: 67 GGGKSMCYQIPALAKEGIVLVVC-------PL-IALMENQVMALKEKGIAAEFLSSTKTA 118
Query: 178 PNLDTIC--VYGGTPISQQMRQLDYGVDVVVGTPG---RIIDLLNRGALNLKEVQFMVLD 232
D I + G P ++ L Y ++ TPG ++ + +RG L+L + +D
Sbjct: 119 KAKDKIHEDLGSGKPSTR----LLYVTPELIATPGFMSKLTKIHSRGLLSL-----IAID 169
Query: 233 EADQMLQIG--FQEDVEKI--LDRLPPKRQTLMFSATMPYEIKQ------------LTRK 276
EA + G F+ K+ L P L +AT ++++ + +
Sbjct: 170 EAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKT 229
Query: 277 YLNNPVTI------DLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKC-IV 329
N P DL+ DS L+D + + G C I+
Sbjct: 230 SFNRPNIYYEVRYKDLLDDSYSDLSDRL----------------------KSMGDVCAII 267
Query: 330 FTQTKRDADRLS-HSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLD 388
+ + D LS H + + C A H ++ R L + V+VAT G+D
Sbjct: 268 YCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGID 327
Query: 389 IPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGS 444
+V +V H+++P + E F SGR GR T++L + D R + I R+ G+
Sbjct: 328 RKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSGN 383
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 164/416 (39%), Gaps = 80/416 (19%)
Query: 67 FPYEEGSKNDEGLEIKKLGISEEIVSALAKK-GISKLFPIQRAVLEPAMQGRDMIGRART 125
P E S N + LE L E +V L G +Q ++ + GRD T
Sbjct: 10 LPLIETSGNKKKLE---LCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPT 66
Query: 126 GTGKTLAFGIPI--KDKIIKFNAKHGRGRDPLALALAPTRELA---KQVEKEFYDS---A 177
G GK++ + IP K+ I+ PL +AL + +A K + EF S A
Sbjct: 67 GGGKSMCYQIPALAKEGIVLVVC-------PL-IALMENQVMALKEKGIAAEFLSSTKTA 118
Query: 178 PNLDTIC--VYGGTPISQQMRQLDYGVDVVVGTPG---RIIDLLNRGALNLKEVQFMVLD 232
D I + G P ++ L Y ++ TPG ++ + +RG L+L + +D
Sbjct: 119 KAKDKIHEDLGSGKPSTR----LLYVTPELIATPGFMSKLTKIHSRGLLSL-----IAID 169
Query: 233 EADQMLQIG--FQEDVEKI--LDRLPPKRQTLMFSATMPYEIKQ------------LTRK 276
EA + G F+ K+ L P L +AT ++++ + +
Sbjct: 170 EAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKT 229
Query: 277 YLNNPVTI------DLVGDSDQKLADGISLYSIVTDSYVKQGILAPLITEHAKGGKC-IV 329
N P DL+ DS L+D + + G C I+
Sbjct: 230 SFNRPNIYYEVRYKDLLDDSYSDLSDRL----------------------KSMGDVCAII 267
Query: 330 FTQTKRDADRLS-HSMSKSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLD 388
+ + D LS H + + C A H ++ R L + V+VAT G+D
Sbjct: 268 YCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGID 327
Query: 389 IPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVGS 444
+V +V H+++P + E F SGR GR T++L + D R + I R+ G+
Sbjct: 328 RKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSGN 383
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 317 LITEHAKGGKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFN 375
++ E G I++ T++D R++ + KS +K A + + + RT F E
Sbjct: 499 MLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLE 558
Query: 376 VLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
V+VAT G+D NV +IHY P + E + +GR GR GK IL
Sbjct: 559 VVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 325 GKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVA 383
G I++ T++D R++ + KS +K A + + + RT F E V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
G+D NV +IHY P + E + +GR GR GK IL
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 325 GKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVA 383
G I++ T++D R++ + KS +K A + + + RT F E V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAIL 425
G+D NV +IHY P + E + +GR GR GK IL
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 325 GKCIVFTQTKRDADRLSHSMSKS-LKCEALHGDISQAQRERTLAGFREGHFNVLVATDVA 383
G I++ T++D R++ + KS +K A + + + RT F E V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGK 419
G+D NV +IHY P + E + +GR GR GK
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGK 602
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 153/392 (39%), Gaps = 64/392 (16%)
Query: 98 GISKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIP-----------------IKDK 140
G L P+Q + A+ +D TG GK+L + +P I+D+
Sbjct: 198 GNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQ 257
Query: 141 IIKFNAKHGRGRDPLALALAPTRELAKQVEKEFYDSAPNLDTICVYGGTPISQQMRQLDY 200
II N K G + F +S N + Q++R+
Sbjct: 258 IITLNLKFG-------------------IPATFLNSQQNASQ-----AAAVLQELRKDKP 293
Query: 201 GVDVVVGTPGRIIDLLNRGALNLKEVQF-------MVLDEADQMLQIG--FQEDVEKI-- 249
++ TP RI N+ + + + V+DEA + Q G F+ D +
Sbjct: 294 SCKLLYVTPERIAG--NQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGS 351
Query: 250 LDRLPPKRQTLMFSATMPYEIKQLTRKYLNNPVTIDLVGDSDQKLADGISL-YSIVTDSY 308
L + P+ + +AT + +++ L P I L ++ D +L Y ++ +
Sbjct: 352 LKQNFPRVPVMALTATATHPVREDILNALRIPHAIVL-----ERSFDRPNLKYEVIVKTK 406
Query: 309 VKQGILAPLITEHAKGGKCIVFTQTKRDADRLSHSMSKSLKCEA--LHGDISQAQRERTL 366
L L+ + K IV+ +K + +S +++ K +A H ++ QR
Sbjct: 407 EPLKQLGQLLMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQ 466
Query: 367 AGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAI-L 425
+ +G +++ AT G+D +V VIH + + E + SGR GR I L
Sbjct: 467 KKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIAL 526
Query: 426 VHTEDQSRAIRTIERDVGSKFKELPKIAVDRA 457
+D SR + I G K KE K A+ +A
Sbjct: 527 YQKKDFSRVVCMIRNGQGYK-KESFKTAMAQA 557
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 328 IVFTQTKRDADRLSHSMS-KSLKCEALHGDISQAQRERTLAGFREGHFNVLVATDVASRG 386
IV+ + + + D++S ++ ++K ++ H IS +R F V+VAT G
Sbjct: 496 IVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMG 555
Query: 387 LDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVG 443
LD +V VIHY LP + E +V GR GR G+ L + ++ +R++ G
Sbjct: 556 LDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLMYSEG 612
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 327 CIVFTQTKRDADRLSHSMSKSLKCEALHGDISQAQR---ERTLAGFREGHFNVLVATDVA 383
CIVF T D L+ M +S +HGD Q ER F G VL+ TD
Sbjct: 50 CIVFVNTIDKVDWLTDKM-RSRDHYVIHGDRDQNTMDTIEREFL-FESGSPQVLITTDPL 107
Query: 384 SRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHTEDQSRAIRTIERDVG 443
G D+ LV++YDLP E +++ GR+G+ AI ED++ + I++
Sbjct: 108 VCGTDLHKASLVVNYDLPTVPENYLNHIGRSGK-----FAINFMIEDEANMLIDIQKFYN 162
Query: 444 SKFKELP 450
+ELP
Sbjct: 163 MVIEELP 169
>Medtr1g031140.1 | ATP-dependent DNA helicase RecG | HC |
chr1:10876622-10858818 | 20130731
Length = 984
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 350 CEALHGDISQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF-- 407
C LHG + ++E TL FR G N+L+AT V G+D+P+ +++ NSE F
Sbjct: 810 CGLLHGRMRSEEKEETLGKFRTGELNILLATQVIEVGVDVPDASMMV----VMNSERFGM 865
Query: 408 --VHR-SGRTGRAGKKGTAILVHT 428
+H+ GR GR ++ IL+ +
Sbjct: 866 AQLHQLRGRVGRGTRQSKCILISS 889
>Medtr1g103260.1 | fanconi anemia, complementation group M protein |
HC | chr1:46727606-46713877 | 20130731
Length = 1198
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 358 SQAQRERTLAGFREGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGR 416
SQ ++ L FR G +NV+VAT + GLDI VDLVI +D + + R GRTGR
Sbjct: 501 SQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGR 559
>Medtr4g116860.1 | endoribonuclease dicer-like protein | HC |
chr4:48375007-48390158 | 20130731
Length = 1625
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 326 KCIVFTQTKRDADRLSHSMSK-----SLKCEALHGDISQAQ--RERTLAG----FREGHF 374
KCIVF A LS+ + K K L G S A+ +T++ FR G
Sbjct: 404 KCIVFVNRIVTARSLSYILQKLELLRQWKSGFLVGVHSGAKIMSRKTMSAIVEKFRSGEL 463
Query: 375 NVLVATDVASRGLDIPNVDLVIHYDLPNNSEIFVHRSGRTGRAGKKGTAILVHT--EDQS 432
N+LVAT V GLDI LVI +DLP F+ GR R + A LV + E +
Sbjct: 464 NLLVATSVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR-ARMPRSEYAFLVDSGNEKEL 522
Query: 433 RAIRTIERDVGSKFKELPKIAVDRASVE 460
I E+D E+ DR S E
Sbjct: 523 AIIDGFEKDESRMNTEI----TDRTSSE 546