Miyakogusa Predicted Gene
- Lj2g3v3057350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3057350.1 tr|Q2LAH5|Q2LAH5_SOYBN Polygalacturonase
(Precursor) OS=Glycine max GN=PG11 PE=2 SV=1,81.82,0,Pectin
lyase-like,Pectin lyase fold/virulence factor;
Glyco_hydro_28,Glycoside hydrolase, family 28;,CUFF.39641.1
(132 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-2485865... 227 3e-60
Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 ... 195 1e-50
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 176 4e-45
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 144 2e-35
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 132 6e-32
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 129 7e-31
Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-4695913... 120 3e-28
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 111 2e-25
Medtr8g009810.1 | pectin lyase superfamily protein | HC | chr8:2... 109 6e-25
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 105 8e-24
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 99 1e-21
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 92 1e-19
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 92 1e-19
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 92 1e-19
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 92 2e-19
Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family ... 90 7e-19
Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family p... 90 7e-19
Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-1379143... 89 8e-19
Medtr2g058840.1 | polygalacturonase 11c, putative | HC | chr2:24... 89 1e-18
Medtr2g058670.1 | polygalacturonase 11c, putative | HC | chr2:24... 88 2e-18
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 87 3e-18
Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family p... 87 5e-18
Medtr2g058640.1 | polygalacturonase 11c, putative | HC | chr2:24... 87 6e-18
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 86 6e-18
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 86 9e-18
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 85 1e-17
Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 ... 85 2e-17
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 84 4e-17
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 83 7e-17
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 83 9e-17
Medtr8g065010.1 | polygalacturonase plant-like protein | HC | ch... 82 9e-17
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 82 1e-16
Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family p... 82 2e-16
Medtr2g032710.2 | polygalacturonase plant-like protein | HC | ch... 81 2e-16
Medtr2g032710.1 | polygalacturonase plant-like protein | HC | ch... 81 2e-16
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 79 2e-15
Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-1473941... 79 2e-15
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 77 3e-15
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 77 3e-15
Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 ... 77 4e-15
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 74 3e-14
Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family p... 71 3e-13
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 70 4e-13
Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-1165736... 70 5e-13
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 70 5e-13
Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family p... 70 6e-13
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 69 1e-12
Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 ... 69 1e-12
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 69 1e-12
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 69 2e-12
Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-4284475... 59 1e-09
Medtr8g007320.1 | endo-polygalacturonase | HC | chr8:1456934-145... 58 2e-09
Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-1355938... 58 3e-09
Medtr8g077320.1 | pectin lyase superfamily protein | LC | chr8:3... 57 4e-09
Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-4294449... 54 4e-08
>Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-24858654 |
20130731
Length = 444
Score = 227 bits (578), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/132 (80%), Positives = 120/132 (90%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+VN A L GTTNGVRIKTWQGGSGYA+NIKF+NIKMQNVTN +IIDQ YCDQ EPCQE++
Sbjct: 312 VVNRAALTGTTNGVRIKTWQGGSGYARNIKFMNIKMQNVTNPVIIDQYYCDQTEPCQERN 371
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
+V+LS VLYQNI GTSASE+AIKF+CSR+VPCR IYLQDVILEPEG G TTA+CENVRY
Sbjct: 372 KAVQLSQVLYQNIRGTSASEIAIKFNCSRSVPCREIYLQDVILEPEGGGGTTATCENVRY 431
Query: 121 VNRGKFFPRCSP 132
VNRGKF+P+CSP
Sbjct: 432 VNRGKFYPQCSP 443
>Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 |
20130731
Length = 437
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 109/131 (83%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
VN ATL GTTNGVRIKTWQGGSGYA+NIKF+NI ++NVTN IIIDQ YCDQ + CQEQ+S
Sbjct: 307 VNRATLIGTTNGVRIKTWQGGSGYARNIKFINIVVRNVTNPIIIDQKYCDQKKKCQEQNS 366
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+V+LSNV+YQNI GTSASEVAIK +CS+ VPC+GI+LQDV + E DT A C+NV+Y
Sbjct: 367 AVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKITGENIKDTIAKCDNVKYS 426
Query: 122 NRGKFFPRCSP 132
N G FFP+C P
Sbjct: 427 NSGMFFPKCHP 437
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 176 bits (447), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 101/129 (78%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
VNGA L TTNGVRIKTWQGGSG A NIKF NI+M+NVTN IIIDQNYCDQ PCQ+Q S
Sbjct: 302 VNGAKLSRTTNGVRIKTWQGGSGSASNIKFQNIQMENVTNPIIIDQNYCDQQSPCQKQKS 361
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+V++ NVLYQNI GTSAS+VA++F+CS+ PC+GI LQ++ LE EG G+ ASC NV+
Sbjct: 362 AVQIRNVLYQNIKGTSASDVAMQFNCSQNFPCQGILLQNIGLELEGGGEAKASCNNVKLS 421
Query: 122 NRGKFFPRC 130
RG P C
Sbjct: 422 YRGNVSPSC 430
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCD-QAEPCQEQ 59
+VNGA + GTTNGVRIKTW GGSG A NIKF NI+M NVTN III+QNYCD + +PC++
Sbjct: 313 LVNGAKISGTTNGVRIKTWPGGSGSASNIKFQNIEMDNVTNPIIINQNYCDKKKKPCKKM 372
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
DS+V++SNVLYQNI G SAS+VA+KFDCS PC+ I +Q+++L E A C NV+
Sbjct: 373 DSAVQISNVLYQNITGKSASDVAVKFDCSEKFPCKEIKMQNILLICEEGEPAKALCNNVQ 432
Query: 120 YVNRGKFFPRC 130
G PRC
Sbjct: 433 LSYIGNVNPRC 443
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 84/128 (65%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+V+GA L T NGVRIKTWQGGSG+A I F NI M+NV+N IIIDQ YCD PC+ Q
Sbjct: 298 IVDGAYLYNTDNGVRIKTWQGGSGFASKITFQNILMENVSNPIIIDQYYCDSRHPCKNQT 357
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S+V++ N+ + NI GTSA+E IKF CS PC G+YL+++ L G+T + C
Sbjct: 358 SAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGNTRSYCWQAHG 417
Query: 121 VNRGKFFP 128
+G +P
Sbjct: 418 SAQGYVYP 425
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+++ A L+GTTNG+RIKTWQGG+GY K ++F N++++NV+N I+IDQ YCD CQ Q
Sbjct: 303 ILDTAFLKGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQS 362
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S++++S ++YQN+ GT+ S AIKFDCS TVPC + L +V LE + G C + +
Sbjct: 363 SALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQ-DGTVETYCHSAQG 421
Query: 121 VNRGKFFP 128
G P
Sbjct: 422 FGYGVVHP 429
>Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-46959130 |
20130731
Length = 376
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%)
Query: 4 GATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSV 63
G L T NG+RIKTWQGG G A NI F +I M+NV+N IIIDQ YCD PC+ Q S+V
Sbjct: 223 GTYLTNTKNGLRIKTWQGGHGLASNITFQDIVMENVSNPIIIDQYYCDSRLPCKNQTSAV 282
Query: 64 KLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVIL 103
++ N+ + NIIGTSASE IKF CS T PC G++L+++ L
Sbjct: 283 QVVNISFINIIGTSASEETIKFACSDTYPCEGLHLENIYL 322
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V + T NGVRIK+W + +GYA++I F N+ MQNV IIIDQ YC + + C Q+
Sbjct: 261 VTDSVFTKTQNGVRIKSWAKPNNGYARDINFRNLIMQNVYYPIIIDQRYCTKTD-CPHQN 319
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S VK+S+V YQ+I GTSAS VAIKFDCS++ PC G+ LQD+ L T++SC N
Sbjct: 320 SGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIYLKGSKTSSSCRNAGG 379
Query: 121 VNRGKFFPR 129
G P+
Sbjct: 380 STLGLVIPK 388
>Medtr8g009810.1 | pectin lyase superfamily protein | HC |
chr8:2423952-2426973 | 20130731
Length = 400
Score = 109 bits (273), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Query: 9 GTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKLSN 67
GT NGVRIK+W + +G+A+NI F + M NV N I+IDQNYC + C Q S VK+SN
Sbjct: 277 GTENGVRIKSWGRPSNGFARNIIFQHATMVNVQNPIVIDQNYCPNQKDCPGQASGVKISN 336
Query: 68 VLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYVNRGKFF 127
++YQ+I GTSA++VA+K +CS T PC GI L+DV+L E + + A C + V G
Sbjct: 337 IIYQDIHGTSATKVALKLNCSPTNPCTGISLEDVMLTYENK-NAEALCNHAGGVTYGVVQ 395
Query: 128 P 128
P
Sbjct: 396 P 396
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V T GT NGVRIK+W + +G+ +NI F + M NV N I+IDQNYC + C Q
Sbjct: 244 VKTVTFTGTQNGVRIKSWGRPSNGFVRNIFFQDAIMVNVQNPIVIDQNYCPNNKGCPGQA 303
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRY 120
S +K+S V YQNI GTSA++VA+KFDCS PC GI ++DV L + + ASC +
Sbjct: 304 SGIKVSGVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKDVKLTYKNQ-VAEASCNHAGG 362
Query: 121 VNRGKFFPR 129
G P
Sbjct: 363 AALGSVQPE 371
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAE-PCQEQ 59
MVNGA + GTTNGVRIKTW GGSG A NI F NI+M NVTN IIIDQNYCD+ + C++
Sbjct: 304 MVNGAKISGTTNGVRIKTWPGGSGIASNITFQNIEMDNVTNPIIIDQNYCDKKKMSCKQM 363
Query: 60 DSSVKLSNVLY 70
DS+V++SNV Y
Sbjct: 364 DSAVQISNVSY 374
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V TL+ T GVRIKTWQGGSG +NI F NI++ +V I+IDQ YCD + C+ S
Sbjct: 256 VRDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGK-CRNVTS 314
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILE 104
+V +S++ Y N+ GT E I F CS ++PC+GI L + LE
Sbjct: 315 AVAVSSIHYTNVHGTYTKE-PIYFACSDSLPCKGITLDTIKLE 356
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V TL+ T GVRIKTWQGGSG +NI F NI++ +V I+IDQ YCD + C+ S
Sbjct: 279 VRDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGK-CRNVTS 337
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILE 104
+V +S++ Y N+ GT E I F CS ++PC+GI L + LE
Sbjct: 338 AVAVSSIHYTNVHGTYTKE-PIYFACSDSLPCKGITLDTIKLE 379
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V T T NG RIK+W + +G+ +++ F++ M +V N I+IDQ+YC + C +
Sbjct: 231 VKSTTFTKTQNGFRIKSWGKPSNGFVRHVHFVHATMIDVQNPILIDQHYCPLYKGCSNEA 290
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILE 104
S + +S+VLY++I GTSA++VA++F+CS PCR I L+D+ L
Sbjct: 291 SGIMISDVLYKDIQGTSATKVAVRFECSSKQPCRRIKLEDLKLS 334
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V +R + NG+RIKTWQGG G N+KF NI+M+NV N I+IDQ YC E C Q S
Sbjct: 311 VRDTVIRESDNGLRIKTWQGGMGSVSNLKFENIQMENVGNCILIDQYYCLTKE-CLNQTS 369
Query: 62 SVKLSNVLYQNIIGTSASEVA-IKFDCSRTVPCRGIYLQDVILEP 105
+V +++V Y+NI GT A I F CS TV C I L +V L P
Sbjct: 370 AVHVNDVSYKNIKGTYDVRTAPIHFACSDTVACTNITLSEVELLP 414
>Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family
protein | LC | scaffold0157:20596-15247 | 20130731
Length = 365
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQA--EPCQEQ 59
V T T NG+RIKTW GGSGYA+NI F I + N IIIDQNY D + Q
Sbjct: 228 VKNCTFIRTENGMRIKTWPGGSGYARNISFEQIILTETKNPIIIDQNYRDLVIDKANNMQ 287
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S V++S V Y+++IGTS S+ +IK +C++ C I++ V + T ASC+N
Sbjct: 288 KSEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNITSISGKTTKASCKNAH 347
>Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:12499881-12505230 | 20130731
Length = 365
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQA--EPCQEQ 59
V T T NG+RIKTW GGSGYA+NI F I + N IIIDQNY D + Q
Sbjct: 228 VKNCTFIRTENGMRIKTWPGGSGYARNISFEQIILTETKNPIIIDQNYRDLVIDKANNMQ 287
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S V++S V Y+++IGTS S+ +IK +C++ C I++ V + T ASC+N
Sbjct: 288 KSEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNITSISGKTTKASCKNAH 347
>Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-13791435 |
20130731
Length = 423
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 7 LRGTTNGVRIKTWQGG-SGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEP-CQEQDSSVK 64
L GTTNG+RIK+W G A +I + +I M+NV N IIIDQ Y + P C+++ S VK
Sbjct: 298 LVGTTNGLRIKSWPDKYPGAATDINYSDITMENVKNPIIIDQEY--ECSPNCKKKPSLVK 355
Query: 65 LSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYVNRG 124
+ N+ ++NI GT+ S +A+ CS+ PC+ + L ++ L + T + C N++ + G
Sbjct: 356 IKNISFRNIRGTTTSPIAVDLKCSKLFPCKNVGLHNINLSLGAKKPTASKCANIKPIYSG 415
Query: 125 KFFP 128
P
Sbjct: 416 SQKP 419
>Medtr2g058840.1 | polygalacturonase 11c, putative | HC |
chr2:24297949-24299598 | 20130731
Length = 417
Score = 88.6 bits (218), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGY--AKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
+ TL T NGVRIKTW G +I F +I M NV N +IIDQ YC ++
Sbjct: 261 IKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKN 320
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S +KLS + ++N+ GTS + + CS VPC G+ L +V L+ G TTA C NV+
Sbjct: 321 PSKIKLSKITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG-APTTAKCTNVK 379
Query: 120 YVNRG 124
+ G
Sbjct: 380 PIVTG 384
>Medtr2g058670.1 | polygalacturonase 11c, putative | HC |
chr2:24244330-24242502 | 20130731
Length = 419
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGY--AKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
+ TL T NGVRIKTW G +I F +I M NV N +IIDQ YC ++
Sbjct: 263 IKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKN 322
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S +KLS + ++N+ GTS + + CS VPC G+ L +V L+ G TTA C NV+
Sbjct: 323 PSKIKLSKITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG-APTTAKCTNVK 381
Query: 120 YVNRG 124
+ G
Sbjct: 382 PIVTG 386
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + ++ + NG+RIKTWQGGSG + F NI M +V N IIIDQ YC + C + S
Sbjct: 314 VRDSIIKMSDNGIRIKTWQGGSGSVSGVTFNNIHMISVRNPIIIDQYYC-LTKDCTNKTS 372
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD 110
+V +SN+LY NI GT + F CS +VPC I L ++ L P +GD
Sbjct: 373 AVSVSNILYTNIKGTYDIKSPPMHFACSDSVPCTNITLSEIELLPS-QGD 421
>Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:11531499-11533056 | 20130731
Length = 399
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 1 MVNGATLRGTTNGVRIKTWQG---GSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQ 57
+V T GT+NGVRIK+W+ + N + +I M NV N I+IDQ+YC +
Sbjct: 263 VVKNCTFNGTSNGVRIKSWESQLKKTLVVSNFTYEDIVMNNVQNPIVIDQDYCSHPPCIK 322
Query: 58 EQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR 108
+ SSV++SNV Y+NI G+ ++VA F+CS+ PC+ I ++++ L P G
Sbjct: 323 KGVSSVQISNVAYKNIRGSGNTKVAASFECSQNKPCQNIRMENINLWPSGH 373
>Medtr2g058640.1 | polygalacturonase 11c, putative | HC |
chr2:24232613-24230991 | 20130731
Length = 407
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGY--AKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ 59
V TL T NGVRIKTW G +I F +I M NVTN IIIDQ YC ++
Sbjct: 263 VKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNNVTNPIIIDQEYCPWNACNKKV 322
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S VKLS + ++NI GTS + + CS VPC G+ L +V ++ G+ A C NV+
Sbjct: 323 PSKVKLSKISFKNIQGTSGAPEGVVLVCSSAVPCDGVELNNVDVKFNGK-PAIAKCSNVK 381
Query: 120 YVNRGKFFPRC 130
G P C
Sbjct: 382 PTVTGT-APAC 391
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + +R + NGVRIKTWQGGSG + F NI M V N IIIDQ YC ++ C + S
Sbjct: 329 VRDSVIRVSDNGVRIKTWQGGSGSVSGVTFSNIHMDTVKNPIIIDQFYC-LSKDCSNKTS 387
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD 110
+V +S+++Y +I GT + F CS ++PC + L D+ L P +GD
Sbjct: 388 AVFVSDIVYTSIKGTYDIRHPPMHFACSDSIPCTNLTLSDIELLPS-QGD 436
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 80/126 (63%), Gaps = 11/126 (8%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQ-- 59
V+ T R TTNG RIKTW GGSGYA+ I + +I + V N +IIDQ Y D EP + +
Sbjct: 259 VSNITFRETTNGARIKTWTGGSGYARKITYEDIIVFKVENPVIIDQQY-DALEPLKTKYN 317
Query: 60 -----DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTA 113
+VK+S+V+++NI GT+ + AI +C+R + C I L+D+ I++ +G+ +A
Sbjct: 318 VLEGVSKAVKVSDVIFRNIRGTTNGKDAIDLNCAR-IGCTNIILEDIDIVDLDGK-KASA 375
Query: 114 SCENVR 119
SC +V+
Sbjct: 376 SCNSVQ 381
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T T+NG RIKT+ GGSGYA+NIK+ +I + V N + I+QNY QDS
Sbjct: 268 VRNCTFTRTSNGARIKTFTGGSGYARNIKYEDITLVEVENPVYINQNY------IPVQDS 321
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
+V++S+V + NI GTS + A++ C + C I L ++ ++P G+ SC N
Sbjct: 322 AVEVSDVTFSNIHGTSTGKYAVELLCEPNIGCTDIVLNNINIKPISGGEALVSCSNAH 379
>Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 |
20130731
Length = 389
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T GTTNG RIKT GGSGYA+ I F I + NV N IIIDQ Y + P D+SVK+
Sbjct: 266 TFIGTTNGARIKTVPGGSGYARQITFEQIILSNVKNPIIIDQGY--KISP---TDTSVKV 320
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYL-QDVILEPEGRGDTTASCENVRYVNRG 124
S+V Y+ IGTSAS++A+ +CS + C I L Q+ I+ + T+ C N R
Sbjct: 321 SSVTYRGFIGTSASKIAVNLNCS-SPGCFNILLDQNNIVATQAGKKTSFFCRNAHGTVRN 379
Query: 125 KF 126
F
Sbjct: 380 TF 381
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 2 VNGATLRGTTNGVRIKTW-QGGSGYAKNIKFLNIKMQNVTNSIIIDQNY-CDQAEPCQEQ 59
V + L GT NG+RIK++ + +G A I F NI M NV N IIIDQ Y CD C+++
Sbjct: 293 VQNSELIGTDNGLRIKSFPERFAGGASEIFFTNINMTNVKNPIIIDQEYECDDI--CKKK 350
Query: 60 DSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S VK++N+ + NI GTSA+ + + CS+ C G+ +V L+ G TTA C NV+
Sbjct: 351 PSLVKIANIHFSNIRGTSATPMVVDMRCSKMHTCPGVTFNNVDLK-FGSALTTARCVNVK 409
Query: 120 YVNRGKFFPRCSP 132
V G P P
Sbjct: 410 PVYTGLAKPPICP 422
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
+V +++ T G RIKTWQGG+G KN+ F IK+ +V ++IDQ YCD+ + C+ Q
Sbjct: 302 IVEDISMKNTLYGARIKTWQGGNGMVKNVSFSRIKVYDVMYPVMIDQYYCDK-QICKNQT 360
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP--EGRGDTTASCENV 118
+V +S V + I G+ + + CS ++PC + L D+ L P RG A C N
Sbjct: 361 GTVIISGVKFDQISGSYTLQ-PVHLACSNSIPCTDVDLTDIQLRPSLSYRGMQQAMCWNS 419
Query: 119 RYVNRGKFFP 128
++G+ P
Sbjct: 420 YGKSQGQLVP 429
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T GTTNG RIKTW+GGSGYA+ I + NIK+ V N III+QNY P S
Sbjct: 268 VKDCTFTGTTNGARIKTWKGGSGYARKITYENIKLVEVKNPIIINQNY----NPHIYDSS 323
Query: 62 S--VKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
S VK+S+V + NI GTS +E ++ +C + C I + + + G+ ASC N
Sbjct: 324 SEVVKVSDVTFLNIHGTSVNENTVQLNCDPKIGCDNIIIDHINITSVAGGEPHASCTNAH 383
>Medtr8g065010.1 | polygalacturonase plant-like protein | HC |
chr8:27299002-27295111 | 20130731
Length = 521
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + T NGVRIKTWQGGSG + + F NI++ V IIIDQ YCD+ C+ Q +
Sbjct: 373 VRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSQVQVPIIIDQFYCDKRN-CKNQTA 431
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V L+ + Y+ I GT + + F CS ++PC + L V L+P
Sbjct: 432 AVALTGINYEGIKGTYTVK-PVHFACSDSLPCIDVSLTSVELQP 474
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T GT+NG RIKT++GGSGYA+NI + +I + V N +IIDQ Y A DS
Sbjct: 263 VQNCTFTGTSNGGRIKTFEGGSGYARNITYEDIILNEVKNPVIIDQAYNPNA------DS 316
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV 101
+V++S+V Y NI GTS E AI+ C + C I L +
Sbjct: 317 AVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHI 356
>Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:2553377-2556933 | 20130731
Length = 389
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T GTTNG RIKT GGSGYA+ I F + + NV N IIIDQ Y + P D+SV++
Sbjct: 266 TFIGTTNGARIKTVPGGSGYARQITFEQVILSNVMNPIIIDQGY--KISP---TDTSVRV 320
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYL-QDVILEPEGRGDTTASCENVRYVNRG 124
S+V Y+ GTSAS++A+ +CS + C I L Q+ I+ + T+ C N R
Sbjct: 321 SSVTYRGFTGTSASKIAVNLNCSSS-GCFDILLDQNNIVATQAGKMTSFFCRNAHGTVRN 379
Query: 125 KF 126
F
Sbjct: 380 TF 381
>Medtr2g032710.2 | polygalacturonase plant-like protein | HC |
chr2:12319301-12315408 | 20130731
Length = 463
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + ++ + NG+RIKTWQGG+G + F NI+M+NV N I IDQ YC E C Q S
Sbjct: 313 VRNSIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINIDQFYCLSKE-CMNQTS 371
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V ++N+ Y+ I GT I F CS TV C I L ++ L P
Sbjct: 372 AVYVNNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLP 416
>Medtr2g032710.1 | polygalacturonase plant-like protein | HC |
chr2:12322300-12315408 | 20130731
Length = 463
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + ++ + NG+RIKTWQGG+G + F NI+M+NV N I IDQ YC E C Q S
Sbjct: 313 VRNSIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINIDQFYCLSKE-CMNQTS 371
Query: 62 SVKLSNVLYQNIIGT-SASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V ++N+ Y+ I GT I F CS TV C I L ++ L P
Sbjct: 372 AVYVNNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLP 416
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T TTNG RIKTW GG+GYA+ + F +I + N +IIDQ Y P +
Sbjct: 272 VRNCTFNRTTNGARIKTWIGGNGYARKVTFEDIILIEADNPVIIDQEY----NP-YDSAY 326
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+VK+S+V ++NI GTS ++ AI+ C + C I L+ + + + ASC+NV V
Sbjct: 327 AVKVSDVTFRNIRGTSIAKHAIQLHCDEDITCTNIILEGINITSSIGEEVHASCKNVNGV 386
>Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-14739416 |
20130731
Length = 534
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V + + NGVRIKTWQGGSG + + F NI++ V I+IDQ YCD+ C S
Sbjct: 386 VRDVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRV-CTNHTS 444
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP 105
+V L+ + Y+ I GT + + F CS ++PC + L V L+P
Sbjct: 445 AVSLAGINYERIKGTYTVK-PVHFACSDSLPCVDVSLTTVELKP 487
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V+ + GT NG RIKTW G+GYA+ I + +I + V N IIIDQ+Y
Sbjct: 261 VSHSIFTGTENGARIKTWTAGTGYARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRK 320
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVR 119
VK+S+V ++ GT+ + AI+ +C+R + C I L+++ + G +ASC NV+
Sbjct: 321 GVKVSDVTFRGFRGTANEKDAIELNCAR-IGCTNIVLENINIAGLGGEKPSASCNNVQ 377
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 55/100 (55%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V TL T GVRIKT QGG G+A+ I F NIK N I IDQ YC C+
Sbjct: 271 VKNCTLTETLTGVRIKTKQGGGGFARRITFENIKFVRAHNPIWIDQFYCVNQMVCRNMTK 330
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV 101
++K+S+V Y+ I GTS ++ AI +C + V C + V
Sbjct: 331 AIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRV 370
>Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 |
20130731
Length = 388
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 10 TTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKLSNVL 69
TTNG RIKT+ GGSGYA+ I F I+++NV N IIIDQ+Y Q +S++++++V
Sbjct: 271 TTNGARIKTFPGGSGYARKIIFEQIQLKNVYNPIIIDQHYGSQV----ATNSALQVNDVT 326
Query: 70 YQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCENVR 119
Y+ GT A ++AI DC + C I L + I+ + R +A C+N
Sbjct: 327 YRGFNGTCAGDIAIDLDC---MDCFNIVLDQINIVSSQKRNKVSAICKNFH 374
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T GT NG RIKT GGSGYA+ I F +I + NV N IIIDQ Y D+
Sbjct: 261 VRNCTFIGTQNGARIKTVPGGSGYARKITFEHIVLVNVMNPIIIDQAY-----TLSTLDT 315
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGDTTASCENVRYV 121
+V + +V Y+ GTS S++AI CS + + + Q+ I+ + T++ C N +
Sbjct: 316 AVSVRDVTYRGFTGTSYSDIAIDLKCSSSGCFKILLDQNNIVSAQPGKKTSSFCRNAHGI 375
Query: 122 NR 123
R
Sbjct: 376 VR 377
>Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:13011474-13013852 | 20130731
Length = 395
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGY---AKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
V T TTNG+RIKTW A +I + +I M NV N I+IDQ YC +
Sbjct: 261 VKNCTFSDTTNGLRIKTWASPLTKILKASHIVYEDIVMNNVGNPILIDQEYCPNRGCSNK 320
Query: 59 QDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEP-EGRGDTTASCEN 117
S+V+++ V Y+NI G+ SE A+ CS PC+ I ++++ L P +G+ C +
Sbjct: 321 VPSNVQINTVSYKNIRGSVNSEHAMNLKCSEKEPCQNIIVENIDLWPNDGKRKLNNWCSH 380
Query: 118 VRYVNRGKFFP 128
+ GK P
Sbjct: 381 AYVSSFGKQNP 391
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 2 VNGATLRGTTNGVRIKTWQG-GSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQD 60
V T G+TNG RIKTW G AKNI + ++ M++V N I+IDQ+Y +
Sbjct: 274 VKNCTFIGSTNGARIKTWIGTAPAEAKNIVYEDLIMKDVQNPIVIDQSYGKKER--VPST 331
Query: 61 SSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILE---PEGRGDTTASCEN 117
S K+S+ ++ I GT+ S + + CS PC I + DV L P+ SC N
Sbjct: 332 SVWKISDAHFRRIKGTTVSNIPVSLQCSSKNPCENIEVADVELTYVGPQKSIPFANSCIN 391
Query: 118 VRYVNRGKFFP 128
+ + GK P
Sbjct: 392 AKAIFGGKLNP 402
>Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-11657369 |
20130731
Length = 281
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQ---- 57
V+ + TTNG RIKT+ GGSGYA+NI F I++ NV N I+I+Q Y +
Sbjct: 169 VHNCSFTNTTNGARIKTFPGGSGYARNITFEQIQLSNVKNPIVINQFYRAKKRAKHYDIK 228
Query: 58 -EQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVIL 103
E++SSV+++NV Y+ G+ ++AI +C+ C I L V +
Sbjct: 229 VEKESSVQVTNVTYRGFNGSYIGDLAINLNCT---SCFNIVLDQVYI 272
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T T NG RIKT GG GYAK+I F I + NV N IIIDQ Y + +
Sbjct: 263 VRNCTFNETQNGARIKTIPGGLGYAKHITFEQIILVNVNNPIIIDQEY-----SISHKGA 317
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYL-QDVILEPEGRGDTTASCENVRY 120
+V +S+V +Q GTSAS +AI+ +CS + C I L Q+ I+ + ++ C N
Sbjct: 318 NVSVSSVKFQGFTGTSASGLAIQLNCSSS-GCYDILLEQNNIVSAQPGKKASSFCTNAHG 376
Query: 121 VNR 123
R
Sbjct: 377 TAR 379
>Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:3280656-3277876 | 20130731
Length = 382
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T G + V+IKTW GG GYAK+I F +I + + IDQ+Y EQ
Sbjct: 253 VKNCTFNGADSAVKIKTWPGGKGYAKHIIFEDIIINQTNYPVFIDQHYMRTP----EQHQ 308
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCENVR 119
+VK+SN+ + NI GT E A+ DC++ + C I L + I + + C+NV
Sbjct: 309 AVKISNITFSNIYGTCIGEDAVVLDCAK-IGCYNITLNQINITSINRKKPASVKCKNVH 366
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T + T NG RIKT GGSGYA++I + I + NV NSIIIDQ Y D Q V +
Sbjct: 265 TFKETQNGARIKTVPGGSGYARHITYDQIILVNVKNSIIIDQYYND----IIPQAGDVSV 320
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRT 90
S+V Y+ GTSA+++AI+ +C +
Sbjct: 321 SDVTYRGFTGTSANDLAIQLNCGSS 345
>Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 |
20130731
Length = 390
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T G + V+IKTW GG GYAK+I F +I + + IDQ+Y EQ +VK+
Sbjct: 265 TFNGGDSAVKIKTWPGGKGYAKDIIFEDIILYQTNYPVYIDQHYMKTP----EQHQAVKI 320
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGRGD-TTASCENVR 119
SN+ + NI GT E AI DC++ + C I L + + R + C+NV
Sbjct: 321 SNIKFSNIHGTCIDENAIVLDCAK-IGCYDITLNQIKITSINRKKPASVKCKNVH 374
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
T + T NG RIKT GGSGYA++I + I + NV NSIIIDQ Y D Q V +
Sbjct: 188 TFKETQNGARIKTVPGGSGYARHITYDQIILVNVKNSIIIDQYYND----IIPQAGDVSV 243
Query: 66 SNVLYQNIIGTSASEVAIKFDC 87
S+V Y+ GTSA+++AI+ +C
Sbjct: 244 SDVTYRGFTGTSANDLAIQLNC 265
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 2 VNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDS 61
V T G + RIKTW GG GYAK I F +I + + N I I Q+Y EQ
Sbjct: 268 VRNCTFNGADSAARIKTWPGGKGYAKAIIFDHIIVNQIRNPISIQQHYMRGG----EQKD 323
Query: 62 SVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCENVR 119
+VK+S+V + NI GT + + AI DC+ + C I L+ + I + + +A C NV+
Sbjct: 324 AVKVSDVTFSNIYGTCSGDDAIFLDCAN-IGCDNITLEQINITSVDPKKPNSAICNNVQ 381
>Medtr5g097860.1 | polygalacturonase | HC | chr5:42842979-42844751 |
20130731
Length = 343
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 1 MVNGATLRGTTNGVRIKTWQGGSGYA--KNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQE 58
+V T+ T NGVRIKTW G + ++ F + M NV N +IIDQ YC + ++
Sbjct: 260 LVKNCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSKQ 319
Query: 59 QDSSVKLSNVLYQNIIGTSAS 79
S +K+S V+++NI GT+ +
Sbjct: 320 VPSKIKISKVIFKNIRGTTTA 340
>Medtr8g007320.1 | endo-polygalacturonase | HC |
chr8:1456934-1457262 | 20130731
Length = 94
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 59 QDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPEGR 108
Q S VK+SN++YQ+I GTSA++VA+K +CS T PC GI L+D +L E +
Sbjct: 22 QASGVKISNIIYQDIHGTSATKVALKLNCSPTNPCTGISLEDEMLTYENK 71
>Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-13559381 |
20130731
Length = 334
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 7 LRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNY 49
G+TNG RIKT+ GGSGYA+ I F I++++V N+IIIDQNY
Sbjct: 278 FTGSTNGARIKTFPGGSGYARKITFEQIQLKDVKNAIIIDQNY 320
>Medtr8g077320.1 | pectin lyase superfamily protein | LC |
chr8:32921813-32926670 | 20130731
Length = 364
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 23/115 (20%)
Query: 6 TLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNSIIIDQNYCDQAEPCQEQDSSVKL 65
+ TTNG RIKT+ GGSGYAK I F I++ NV N+IIIDQ+Y K+
Sbjct: 259 SFTNTTNGARIKTFPGGSGYAKKITFEQIQLTNVKNTIIIDQHY------------GGKV 306
Query: 66 SNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV-ILEPEGRGDTTASCENVR 119
+ Y A ++AI DC + C + L V I + + + + C+N
Sbjct: 307 ATESY-------AGDLAINLDC---MSCFNVVLDQVYIFSSQEKKEFHSFCKNFH 351
>Medtr2g100040.1 | polygalacturonase | LC | chr2:42942787-42944494 |
20130731
Length = 365
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 2 VNGATLRGTTNGVRIKTWQGGS---GYAKNIKFLNIKMQNVTNS-IIIDQNYCDQAEPCQ 57
V TLR T NG+RIKTW N+ F NI M NV+N IIIDQ+
Sbjct: 231 VRNCTLRNTDNGLRIKTWPTTPITYDLVSNLHFENIIMDNVSNPVIIIDQD--------- 281
Query: 58 EQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDV 101
V +++I GTSA++ + CS VPC + L ++
Sbjct: 282 ---------KVTFKDITGTSATQNGVVLICSSGVPCEEVVLSNI 316