Miyakogusa Predicted Gene

Lj2g3v3022930.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022930.2 tr|G7K336|G7K336_MEDTR Rho GTPase-activating
protein OS=Medicago truncatula GN=MTR_5g089490 PE=4
SV=,84.99,0,PH_DOMAIN,Pleckstrin homology domain; RHOGAP,Rho
GTPase-activating protein domain; GTPase activation,CUFF.39631.2
         (774 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase f...  1254   0.0  
Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase f...  1246   0.0  
Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase f...   500   e-141
Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase f...   459   e-129

>Medtr5g089490.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878148-38889392 | 20130731
          Length = 871

 Score = 1254 bits (3244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/778 (81%), Positives = 662/778 (85%), Gaps = 5/778 (0%)

Query: 1   MSASLAAFERPRPVASNTVFKSGPLFIXXXXX--XXXXXXXFILTRTSLVFFKNDPSALP 58
           MSASLAAFERPRP ASNTVFKSGPLFI              FILTRTSLVFFKNDPS LP
Sbjct: 1   MSASLAAFERPRPGASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSTLP 60

Query: 59  QRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL 118
           QRGGEVN+TLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL
Sbjct: 61  QRGGEVNMTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL 120

Query: 119 EQALAQAPSAALVMGHNGIFRSDASDSIEGSFHQWRDKRPVKSLVVGRPILLALEDIDGG 178
           EQALAQAPSAALVMGHNGIFR+D +DSI+GSFHQWRDKRPVKSLVVGRPILLALEDIDGG
Sbjct: 121 EQALAQAPSAALVMGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVGRPILLALEDIDGG 180

Query: 179 PSFLEKALRFLEKNGTKIEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKH 238
           PSFLEKALRFLEK+GTK+EGILRQSADVEEVDRRVQEYEQGK EF  EEDAHVVGDCVKH
Sbjct: 181 PSFLEKALRFLEKHGTKVEGILRQSADVEEVDRRVQEYEQGKVEFDAEEDAHVVGDCVKH 240

Query: 239 VLRELPSSPVPASCCTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI 298
           VLRELPSSPVPASCCTALLEAY+IDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI
Sbjct: 241 VLRELPSSPVPASCCTALLEAYRIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI 300

Query: 299 ASHSQDNRMTASAVAACMAPLLLRPLLAGECELEDEFDVNGDSSXXXXXXXXXXXXXXXI 358
           ASHS  NRMTASAVAACMAPLLLRPLLAGECELEDEFDV+GDSS               I
Sbjct: 301 ASHSNVNRMTASAVAACMAPLLLRPLLAGECELEDEFDVSGDSSAQLLAAANAANNAQAI 360

Query: 359 ITTLLEEYENIFDEENIQRCSMSADSRVENSGTEESTDDDNIDVKENGYHDAENEVDQET 418
           ITTLLEEYEN+FDEENIQRCS+SADSRVENSG+E+STDDDNIDVKENGYHDAENE DQET
Sbjct: 361 ITTLLEEYENVFDEENIQRCSISADSRVENSGSEDSTDDDNIDVKENGYHDAENENDQET 420

Query: 419 DDDADRVHSGKSSESSGYAGSDLYDYKAFGAXXXXXXXXXXNHVKAGNSNLNAIPDIQLS 478
           DDDADRVHSGK SESSGYAGSDLYDYKAFG           NH +A NSNLN +PD  LS
Sbjct: 421 DDDADRVHSGKLSESSGYAGSDLYDYKAFGGDDSDVGSSTSNHAQAENSNLNTVPDTHLS 480

Query: 479 EDQNKQRKSKENSVDEKDAPNVLPSTESYRSMGEILSSMDPGNHLPVPGIESGSGXXXXX 538
           ED++KQRK  EN VD+ D P VLPSTESYRSMGEILSSMDPGNHLPV   +SG+G     
Sbjct: 481 EDKSKQRKVNENVVDD-DPPIVLPSTESYRSMGEILSSMDPGNHLPVIEAQSGTGKQTTG 539

Query: 539 XXXXXX--XXXXXTFWGRSNPRKTPXXXXXXXXGEEELAIQRLEIAKSDLQHRIAKEARG 596
                        TFWGRSNPRK+P        GEEELAIQRLEIAK+DLQHRIAKEARG
Sbjct: 540 KTSSGTSFSTKRSTFWGRSNPRKSPSVESVDSSGEEELAIQRLEIAKNDLQHRIAKEARG 599

Query: 597 NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSTGQLSSSRGM 656
           NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMS+GQ+S+SRGM
Sbjct: 600 NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSGQISNSRGM 659

Query: 657 DSKTKXXXXXXXXXXXDVARLKQKVAEXXXXXXXXXXXXYGSLTDVGDRYQHAQNQPQPR 716
           DSKTK           DVARLKQKVAE            YGS+TDVGDRYQHAQN PQPR
Sbjct: 660 DSKTKAELEEIALAEADVARLKQKVAELHHQLNQQRQHHYGSVTDVGDRYQHAQNLPQPR 719

Query: 717 FLQQDFDSTLAFCNHERKQRTEESVLGTDWRNIKGQILASGNGSRQPSRKQFIDSSPS 774
           FLQQDFDSTLA+CNHERKQRTEES LG+DWRNIKGQ+LASGNGSRQPSRK FIDSSPS
Sbjct: 720 FLQQDFDSTLAYCNHERKQRTEESGLGSDWRNIKGQVLASGNGSRQPSRKPFIDSSPS 777


>Medtr5g089490.2 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:38878170-38889387 | 20130731
          Length = 880

 Score = 1246 bits (3223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/787 (80%), Positives = 662/787 (84%), Gaps = 14/787 (1%)

Query: 1   MSASLAAFERPRPVASNTVFKSGPLFIXXXXX--XXXXXXXFILTRTSLVFFKNDPSALP 58
           MSASLAAFERPRP ASNTVFKSGPLFI              FILTRTSLVFFKNDPS LP
Sbjct: 1   MSASLAAFERPRPGASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSTLP 60

Query: 59  QRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL 118
           QRGGEVN+TLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL
Sbjct: 61  QRGGEVNMTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTAL 120

Query: 119 EQALAQAPSAALVMGHNGIFRSDASDSIEGSFHQWRDKRPVKSLVVGRPILLALEDIDGG 178
           EQALAQAPSAALVMGHNGIFR+D +DSI+GSFHQWRDKRPVKSLVVGRPILLALEDIDGG
Sbjct: 121 EQALAQAPSAALVMGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVGRPILLALEDIDGG 180

Query: 179 PSFLEKALRFLEKNGTKIEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKH 238
           PSFLEKALRFLEK+GTK+EGILRQSADVEEVDRRVQEYEQGK EF  EEDAHVVGDCVKH
Sbjct: 181 PSFLEKALRFLEKHGTKVEGILRQSADVEEVDRRVQEYEQGKVEFDAEEDAHVVGDCVKH 240

Query: 239 VLRELPSSPVPASCCTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI 298
           VLRELPSSPVPASCCTALLEAY+IDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI
Sbjct: 241 VLRELPSSPVPASCCTALLEAYRIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTI 300

Query: 299 ASHSQDNRMTASAVAACMAPLLLRPLLAGECELEDEFDVNGDSSXXXXXXXXXXXXXXXI 358
           ASHS  NRMTASAVAACMAPLLLRPLLAGECELEDEFDV+GDSS               I
Sbjct: 301 ASHSNVNRMTASAVAACMAPLLLRPLLAGECELEDEFDVSGDSSAQLLAAANAANNAQAI 360

Query: 359 ITTLLEEYENIFDEENIQRCSMSADSRVENSGTEESTDDDNIDVKENGYHDAENEVDQET 418
           ITTLLEEYEN+FDEENIQRCS+SADSRVENSG+E+STDDDNIDVKENGYHDAENE DQET
Sbjct: 361 ITTLLEEYENVFDEENIQRCSISADSRVENSGSEDSTDDDNIDVKENGYHDAENENDQET 420

Query: 419 DDDADRVHSGKSSESSGYAGSDLYDYKAFGAXXXXXXXXXXNHVKAGNSNLNAIPDIQLS 478
           DDDADRVHSGK SESSGYAGSDLYDYKAFG           NH +A NSNLN +PD  LS
Sbjct: 421 DDDADRVHSGKLSESSGYAGSDLYDYKAFGGDDSDVGSSTSNHAQAENSNLNTVPDTHLS 480

Query: 479 EDQNKQRKSKENSVDEKDAPNVLPSTESYRSMGEILSSMDPGNHLPVPGIESGSGXXXXX 538
           ED++KQRK  EN VD+ D P VLPSTESYRSMGEILSSMDPGNHLPV   +SG+G     
Sbjct: 481 EDKSKQRKVNENVVDD-DPPIVLPSTESYRSMGEILSSMDPGNHLPVIEAQSGTGKQTTG 539

Query: 539 XXXXXX--XXXXXTFWGRSNPRKTPXXXXXXXXGEEELAIQRLEIAKSDLQHRIAKEARG 596
                        TFWGRSNPRK+P        GEEELAIQRLEIAK+DLQHRIAKEARG
Sbjct: 540 KTSSGTSFSTKRSTFWGRSNPRKSPSVESVDSSGEEELAIQRLEIAKNDLQHRIAKEARG 599

Query: 597 NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSTGQLSSSRGM 656
           NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMS+GQ+S+SRGM
Sbjct: 600 NAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSGQISNSRGM 659

Query: 657 DSKTKXXXXXXXXXXXDVARLKQKVAEXXXXXXXXXXXXYGSLTDVGDRYQHAQNQPQPR 716
           DSKTK           DVARLKQKVAE            YGS+TDVGDRYQHAQN PQPR
Sbjct: 660 DSKTKAELEEIALAEADVARLKQKVAELHHQLNQQRQHHYGSVTDVGDRYQHAQNLPQPR 719

Query: 717 FLQQDFDSTLAFCNHERKQRTE---------ESVLGTDWRNIKGQILASGNGSRQPSRKQ 767
           FLQQDFDSTLA+CNHERKQRTE         ES LG+DWRNIKGQ+LASGNGSRQPSRK 
Sbjct: 720 FLQQDFDSTLAYCNHERKQRTEVNFGFSFKQESGLGSDWRNIKGQVLASGNGSRQPSRKP 779

Query: 768 FIDSSPS 774
           FIDSSPS
Sbjct: 780 FIDSSPS 786


>Medtr3g100580.1 | GTPase-activator protein for Rho-like GTPase
           family protein, putative | HC | chr3:46266743-46256804 |
           20130731
          Length = 888

 Score =  500 bits (1287), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 313/652 (48%), Positives = 402/652 (61%), Gaps = 56/652 (8%)

Query: 12  RPVASNTVFKSGPLFIXXXXX--XXXXXXXFILTRTSLVFFKNDPSALPQRGGEVNLTLG 69
           R   +N +FKSGPLF+              FILT+TSLVFF++DP+A+  +G EVNLTLG
Sbjct: 31  RGSNNNAIFKSGPLFLSSKGIGWTSWKKRWFILTQTSLVFFRSDPNAISPKGNEVNLTLG 90

Query: 70  GIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTALEQALAQAPSAA 129
           GIDLNNSGSV+V+ DKKLLTV FPDG +GRAFTLKAET+EDL+EWK ALE+AL +APSAA
Sbjct: 91  GIDLNNSGSVIVKADKKLLTVQFPDGHEGRAFTLKAETTEDLYEWKIALEKALEKAPSAA 150

Query: 130 LVMGHNGIFRSDASDSIEGSFHQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFL 189
             M  NGIFR+D +DSI+ S  Q  +K P KS V+G PILLALED+DG P+FLEKAL F+
Sbjct: 151 NGMEQNGIFRNDQTDSIDISLDQLHEKEPAKSTVIGLPILLALEDVDGSPTFLEKALTFI 210

Query: 190 EKNGTKIEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVP 249
           E++G ++EGILRQ+ADV++V+RRV+EYEQGK +F P EDAHV+GDC+KHVLR L SSPVP
Sbjct: 211 EEHGARVEGILRQAADVDDVERRVREYEQGKVDFAPNEDAHVIGDCIKHVLRGLLSSPVP 270

Query: 250 ASCCTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTIASHSQDNRMTA 309
           ASCC ALLEA + DR   R+ +MR AI +TFPEPNRRLLQRIL MM T+ASH   NRM++
Sbjct: 271 ASCCKALLEACRTDRS-VRVASMRAAINDTFPEPNRRLLQRILLMMQTVASHKAVNRMSS 329

Query: 310 SAVAACMAPLLLRPLLAGECELEDEFDVNGDSSXXXXXXXXXXXXXXXIITTLLEEYENI 369
           SAVAACMAPLLLRPLLAGECE++++FDV GD S               I+ TLLEEY +I
Sbjct: 330 SAVAACMAPLLLRPLLAGECEIDNDFDVGGDGSIQLLQAAAAANHAQAIVITLLEEYNSI 389

Query: 370 FDEENIQRCSMSADSRVENSGTEESTDDD---NIDVKENGYHDAENEV------------ 414
           F E ++    +  D+    S +EE TDDD   + D  +   H+++ +             
Sbjct: 390 FGEGSVS-PDIYTDTEESGSESEEGTDDDLSYDEDYDDESIHESDEDEEDDLVSESYTET 448

Query: 415 -DQETDDDADRVHSGKSSESSGYAGSDLYDYKAFGAXXXXXXXXXXNHVKAGNSNLNAIP 473
            D E  +D D  HS  S++SS  AG +                   N V     N  ++ 
Sbjct: 449 GDSEDYNDKDHDHSNSSTKSS-EAGEE-------------------NKV-----NQMSLK 483

Query: 474 DIQLSEDQNKQRKSKENSVDEKDAPNVLPSTESYRSMGEI----LSSMDPGNHLPVPGIE 529
             + S  Q++  +S EN +  K    V  S ++   +GE+     S  D  +  P     
Sbjct: 484 SREGSPTQHENTESSENLMSPKKTAYVDQSNKAADMVGEVSTVLASKRDSSSRSP----- 538

Query: 530 SGSGXXXXXXXXXXXXXXXXTFWGRSNPRKTPXXXXXXXXGEEELAIQRLEIAKSDLQHR 589
             S                 T  GR++ RK           EEE  I++LE  K+ LQ+ 
Sbjct: 539 --SHMKKSATMSNVPAPRHRTMLGRTSARKNLSMESIDFPIEEEDEIEKLEATKTQLQNE 596

Query: 590 IAKEARGNAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEV 641
           IA E + N  LQ+ +  RK+ L ERRLALEQDV++LQEQL  E+  RA LE 
Sbjct: 597 IADEVKANEKLQSKINERKKDLQERRLALEQDVAKLQEQLHKEKSSRATLET 648


>Medtr5g065960.1 | GTPase-activator protein for Rho-like GTPase
           family protein | HC | chr5:27771683-27785143 | 20130731
          Length = 929

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/358 (62%), Positives = 268/358 (74%), Gaps = 3/358 (0%)

Query: 17  NTVFKSGPLFIXXXXX--XXXXXXXFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLN 74
           N VFK G LF+              FILT+TSLVFF++DP+ +PQ+G E NLTLGGIDLN
Sbjct: 36  NKVFKCGTLFLSSKGIGWTSWKKRWFILTQTSLVFFRSDPNGVPQKGNEANLTLGGIDLN 95

Query: 75  NSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLFEWKTALEQALAQAPSAALVMGH 134
           NSGSV ++ DKKLLTV FP+  DGR  TLKAET+EDL+EWKTALE  LA APSA  VMG 
Sbjct: 96  NSGSVSIKADKKLLTVQFPNVHDGRVLTLKAETTEDLYEWKTALENVLAHAPSATNVMGQ 155

Query: 135 NGIFRSDASDSIEGSFHQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFLEKNGT 194
           +GIFRS  +DS++    Q +DK  V   V+GRPILLALE++DG PSFLEKALRF+E++G 
Sbjct: 156 SGIFRSYQADSLDIYLDQLKDKETVNYAVLGRPILLALEEVDGTPSFLEKALRFIEEHGA 215

Query: 195 KIEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASCCT 254
           K+EGILRQ+ADVE+V+ RV+EYEQGK EF   EDAHVV DCVKHVLREL S P+P SCC 
Sbjct: 216 KVEGILRQAADVEDVENRVREYEQGKVEFSEGEDAHVVADCVKHVLRELRSFPIPVSCCK 275

Query: 255 ALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRILKMMHTIASHSQDNRMTASAVAA 314
           ALL A +  R E R++AMR AI +TFPEPNRRLLQRIL MM  +AS   +NRM++SAVAA
Sbjct: 276 ALLAACRTAR-ENRVSAMRTAICDTFPEPNRRLLQRILLMMQAVASRKDENRMSSSAVAA 334

Query: 315 CMAPLLLRPLLAGECELEDEFDVNGDSSXXXXXXXXXXXXXXXIITTLLEEYENIFDE 372
           CMAPLLLRPLL G+CE+E++FDV GDSS               I+ TLLEEY +IF+E
Sbjct: 335 CMAPLLLRPLLVGDCEIENDFDVGGDSSLQLLQAAAAANHAQGIVITLLEEYNSIFEE 392