Miyakogusa Predicted Gene

Lj2g3v3022920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022920.1 Non Characterized Hit- tr|G7K326|G7K326_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.66,0.000000000000001, ,CUFF.39615.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089380.1 | hypothetical protein | LC | chr5:38848771-3884...    87   3e-18
Medtr5g086360.1 | hypothetical protein | HC | chr5:37328062-3732...    83   5e-17
Medtr1g103060.1 | hypothetical protein | LC | chr1:46627062-4662...    66   8e-12

>Medtr5g089380.1 | hypothetical protein | LC |
          chr5:38848771-38849072 | 20130731
          Length = 68

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 50/67 (74%)

Query: 1  MMVQEARLTGRSGLRVQRPVIPPLSGAGGYRCSVKPASRRALQFRNQEARAFAKAPWPNS 60
          MMVQ ARLT   GLR+Q+PVIPPLS  G   CSVKPAS  +L  R+QE  AFAK PWPNS
Sbjct: 1  MMVQWARLTRPYGLRIQQPVIPPLSREGSVHCSVKPASCGSLHSRDQEICAFAKIPWPNS 60

Query: 61 QLGVGRP 67
          QLG GRP
Sbjct: 61 QLGAGRP 67


>Medtr5g086360.1 | hypothetical protein | HC |
          chr5:37328062-37328358 | 20130731
          Length = 81

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 49/74 (66%)

Query: 10 GRSGLRVQRPVIPPLSGAGGYRCSVKPASRRALQFRNQEARAFAKAPWPNSQLGVGRPLI 69
          G   L + + VIPPLS A G RCS KPASR AL  RNQE +AFA+ PWPNSQLG G+P  
Sbjct: 6  GSPSLELLQLVIPPLSRARGLRCSAKPASRSALSSRNQETKAFAQIPWPNSQLGEGKPTY 65

Query: 70 AANSPAQRHQSHVP 83
            N P+    SHVP
Sbjct: 66 CRNQPSPTSHSHVP 79


>Medtr1g103060.1 | hypothetical protein | LC |
           chr1:46627062-46627433 | 20130731
          Length = 96

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 54/109 (49%), Gaps = 23/109 (21%)

Query: 1   MMVQEARLTGRSGLRVQRPVIPPLSGAGGYRCSVKPASRRALQFRNQEARAFAKAPWPNS 60
           ++VQ ARLT   GL VQRPVIPPL+     RC + P        R+              
Sbjct: 11  VVVQVARLTRHIGLEVQRPVIPPLT-VKSRRCPIGPTLNLERAGRHG------------- 56

Query: 61  QLGVGRPLIAANSPAQRHQSHVPSPWCPHLGYKLSLLSSANSSPCQRFI 109
                    AA +P  +  SHVPSP CPHL YKL L SSA+  PCQ+ I
Sbjct: 57  ---------AATNPTWQILSHVPSPSCPHLSYKLKLPSSASWQPCQKII 96