Miyakogusa Predicted Gene

Lj2g3v3022830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022830.1 tr|Q474Q3|Q474Q3_CUPPJ Rhodanese-like protein
OS=Cupriavidus pinatubonensis (strain JMP134 / LMG
119,42.86,7e-19,Rotamase,Peptidyl-prolyl cis-trans isomerase,
PpiC-type; Rhodanese,Rhodanese-like domain; seg,NULL; ,CUFF.39606.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089330.1 | parvulin-type peptidyl prolyl cis/trans isomer...   360   e-100

>Medtr5g089330.1 | parvulin-type peptidyl prolyl cis/trans isomerase
           | LC | chr5:38822974-38812230 | 20130731
          Length = 636

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/229 (75%), Positives = 185/229 (80%)

Query: 61  MAPKAXXXXXXXXXXXXXXXEREILVQHXXXXXXXXXXXXXXXXRISKGEDLSDLAVEYS 120
           M PKA               EREILVQH                R++ GEDLSDLAVE+S
Sbjct: 408 MPPKASASYSTGGSSVEGGAEREILVQHLLVKEDDPKLLVDLQQRVAAGEDLSDLAVEHS 467

Query: 121 ICPSKDEGGMLGWVRKGQMVPEFEEAAFGAPLNKVVRCKTQFGWHLLQVLSEREESLLQD 180
           ICPSKDEGGMLGWVRKGQMVPEFEEAAF APLNK+VRCKTQFGWHLLQVLSEREE +L D
Sbjct: 468 ICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKIVRCKTQFGWHLLQVLSEREEPVLLD 527

Query: 181 IQPAELHAKFQDPNFSEEAQLIDVREPEEVDKASLPGFTVLPLRQFGTWGPEVTTKFDPQ 240
           IQP ELH KFQDPNF EEAQLIDVREPEEV  ASLPGFTVLPLRQFGTWGPE+ +KFD Q
Sbjct: 528 IQPDELHVKFQDPNFLEEAQLIDVREPEEVTTASLPGFTVLPLRQFGTWGPEINSKFDLQ 587

Query: 241 KDTYVMCHHGVRSLQVSKWLQSQGFRKVYNVSGGIHAYAVQVDPSVPKY 289
           KDTYV+CHHGVRSLQV++WLQSQGFRKVYN+SGGIHAYAV+VDPSVP Y
Sbjct: 588 KDTYVLCHHGVRSLQVARWLQSQGFRKVYNISGGIHAYAVKVDPSVPTY 636



 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 162/230 (70%), Positives = 182/230 (79%)

Query: 60  IMAPKAXXXXXXXXXXXXXXXEREILVQHXXXXXXXXXXXXXXXXRISKGEDLSDLAVEY 119
           IM+P A               ERE+LVQH                R+S GEDLSDLAV+Y
Sbjct: 63  IMSPYATTLYSTGSSAVEGGGEREVLVQHLLVKEDDEKLFLNLQKRLSAGEDLSDLAVDY 122

Query: 120 SICPSKDEGGMLGWVRKGQMVPEFEEAAFGAPLNKVVRCKTQFGWHLLQVLSEREESLLQ 179
           S+CPSK+EGG LGWVRKGQMVPEFEEA F APLNKVV CKT+FGWHLLQVLSEREES+ Q
Sbjct: 123 SVCPSKEEGGRLGWVRKGQMVPEFEEAVFSAPLNKVVMCKTKFGWHLLQVLSEREESVFQ 182

Query: 180 DIQPAELHAKFQDPNFSEEAQLIDVREPEEVDKASLPGFTVLPLRQFGTWGPEVTTKFDP 239
           DIQP ELH K QDPNFS+EAQLIDVREPEEVDKASLPGF VLPL QFGTW PE+ TK D 
Sbjct: 183 DIQPDELHVKLQDPNFSKEAQLIDVREPEEVDKASLPGFMVLPLLQFGTWVPEINTKLDL 242

Query: 240 QKDTYVMCHHGVRSLQVSKWLQSQGFRKVYNVSGGIHAYAVQVDPSVPKY 289
           QK+TYV+CHHG+RSL+V++WLQSQGFRK+YN+SGGI+AYAVQVDPS+P Y
Sbjct: 243 QKNTYVLCHHGIRSLKVARWLQSQGFRKIYNISGGINAYAVQVDPSIPTY 292