Miyakogusa Predicted Gene

Lj2g3v3022780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3022780.1 tr|I1JZE3|I1JZE3_SOYBN Methylenetetrahydrofolate
reductase OS=Glycine max GN=Gma.2387 PE=3
SV=1,81.98,0,METHYLENETETRAHYDROFOLATE REDUCTASE,NULL;
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE
RELA,CUFF.39603.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC | chr...   298   1e-81
Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC | chr...    75   2e-14

>Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC |
           chr1:14723769-14718084 | 20130731
          Length = 595

 Score =  298 bits (764), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 141/172 (81%), Positives = 152/172 (88%)

Query: 2   MKGMVAHNPSFCAITWGAGGSKADLTLEIAKRMQNLACVETMMHLTCINMPIDKIDNALL 61
           M  MVAHNPSFC ITWGAGG+ ADLTLEIA +MQN+ CVETMMHLTC NMP+DKID+AL 
Sbjct: 39  MDRMVAHNPSFCDITWGAGGTTADLTLEIANKMQNIICVETMMHLTCTNMPVDKIDHALE 98

Query: 62  TIKSNDLQNVLALRGDPPKGDEKFVPIEGGFASARYLVKHIRGKYGDYFGITVAGYPEAH 121
           TIKSN +QNVLALRGDPP G EKFV  EGGFA AR LV+HIR KYGDYFGIT+AGYPEAH
Sbjct: 99  TIKSNGIQNVLALRGDPPHGQEKFVQTEGGFACARDLVQHIRSKYGDYFGITIAGYPEAH 158

Query: 122 PDVIGSDGVATPESYQNDLTYLKSKVDARADLIVTQLFYDTDIFLKFVNDCR 173
           PDVIG+DG+AT E YQ+DL YLKSKVDA ADLIVTQLFYDTDIFLKFVNDCR
Sbjct: 159 PDVIGADGLATAEGYQSDLAYLKSKVDAGADLIVTQLFYDTDIFLKFVNDCR 210


>Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC |
          chr5:1192998-1190936 | 20130731
          Length = 267

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 40/48 (83%)

Query: 51 MPIDKIDNALLTIKSNDLQNVLALRGDPPKGDEKFVPIEGGFASARYL 98
          MP+DKID+AL TIKSN++QNVLALRGDPP G EKFV   GGFA AR L
Sbjct: 1  MPVDKIDHALETIKSNEIQNVLALRGDPPHGQEKFVQTGGGFACARDL 48